ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GER:A18:A22

Extra

PDB:
ATOM 1 O3' G A 17 38.705 26.544 17.255 1.00 16.09 O
ATOM 2 P A A 18 40.193 26.006 17.020 1.00 17.81 P
ATOM 3 OP1 A A 18 41.036 26.517 18.132 1.00 20.52 O
ATOM 4 OP2 A A 18 40.620 26.240 15.617 1.00 16.72 O
ATOM 5 O5' A A 18 40.057 24.429 17.207 1.00 16.18 O
ATOM 6 C5' A A 18 39.504 23.890 18.404 1.00 16.55 C
ATOM 7 C4' A A 18 39.385 22.389 18.294 1.00 16.09 C
ATOM 8 O4' A A 18 38.436 22.044 17.254 1.00 15.06 O
ATOM 9 C3' A A 18 40.637 21.665 17.846 1.00 16.72 C
ATOM 10 O3' A A 18 41.540 21.521 18.931 1.00 18.48 O
ATOM 11 C2' A A 18 40.056 20.326 17.413 1.00 15.91 C
ATOM 12 O2' A A 18 39.702 19.530 18.530 1.00 17.34 O
ATOM 13 C1' A A 18 38.782 20.784 16.702 1.00 15.11 C
ATOM 14 N9 A A 18 38.953 20.940 15.256 1.00 14.32 N
ATOM 15 C8 A A 18 39.028 22.090 14.504 1.00 14.65 C
ATOM 16 N7 A A 18 39.152 21.869 13.213 1.00 12.91 N
ATOM 17 C5 A A 18 39.161 20.484 13.114 1.00 11.93 C
ATOM 18 C6 A A 18 39.251 19.614 12.015 1.00 13.43 C
ATOM 19 N6 A A 18 39.312 20.025 10.737 1.00 11.11 N
ATOM 20 N1 A A 18 39.263 18.285 12.268 1.00 13.52 N
ATOM 21 C2 A A 18 39.160 17.870 13.536 1.00 13.31 C
ATOM 22 N3 A A 18 39.045 18.589 14.652 1.00 14.42 N
ATOM 23 C4 A A 18 39.056 19.903 14.366 1.00 14.02 C
ATOM 24 P U A 19 43.115 21.590 18.662 1.00 20.36 P
ATOM 25 OP1 U A 19 43.779 21.528 19.993 1.00 21.42 O
ATOM 26 OP2 U A 19 43.390 22.730 17.747 1.00 20.37 O
ATOM 27 O5' U A 19 43.425 20.241 17.871 1.00 18.24 O
TER

ATOM 1 O3' U B 21 41.060 13.070 22.476 1.00 14.07 O
ATOM 2 P G B 22 39.642 12.862 21.776 1.00 15.00 P
ATOM 3 OP1 G B 22 38.591 13.189 22.768 1.00 15.72 O
ATOM 4 OP2 G B 22 39.638 11.528 21.108 1.00 14.35 O
ATOM 5 O5' G B 22 39.616 13.956 20.615 1.00 14.32 O
ATOM 6 C5' G B 22 39.592 15.347 20.899 1.00 13.57 C
ATOM 7 C4' G B 22 39.469 16.126 19.608 1.00 13.10 C
ATOM 8 O4' G B 22 40.691 15.954 18.842 1.00 13.57 O
ATOM 9 C3' G B 22 38.370 15.628 18.687 1.00 12.34 C
ATOM 10 O3' G B 22 37.133 16.248 19.015 1.00 12.19 O
ATOM 11 C2' G B 22 38.886 16.050 17.319 1.00 13.10 C
ATOM 12 O2' G B 22 38.679 17.428 17.087 1.00 13.98 O
ATOM 13 C1' G B 22 40.380 15.759 17.468 1.00 13.33 C
ATOM 14 N9 G B 22 40.757 14.391 17.110 1.00 13.42 N
ATOM 15 C8 G B 22 40.698 13.282 17.921 1.00 13.75 C
ATOM 16 N7 G B 22 41.103 12.190 17.326 1.00 13.88 N
ATOM 17 C5 G B 22 41.450 12.604 16.047 1.00 12.93 C
ATOM 18 C6 G B 22 41.948 11.862 14.947 1.00 13.06 C
ATOM 19 O6 G B 22 42.183 10.655 14.883 1.00 12.82 O
ATOM 20 N1 G B 22 42.168 12.673 13.835 1.00 12.07 N
ATOM 21 C2 G B 22 41.935 14.023 13.788 1.00 12.53 C
ATOM 22 N2 G B 22 42.216 14.635 12.621 1.00 12.42 N
ATOM 23 N3 G B 22 41.463 14.728 14.807 1.00 12.66 N
ATOM 24 C4 G B 22 41.244 13.958 15.897 1.00 13.99 C
ATOM 25 P G B 23 35.753 15.471 18.752 1.00 13.20 P
ATOM 26 OP1 G B 23 34.655 16.303 19.290 1.00 14.29 O
ATOM 27 OP2 G B 23 35.891 14.046 19.184 1.00 14.86 O
ATOM 28 O5' G B 23 35.630 15.446 17.164 1.00 12.47 O
TER

Atoms:
OP1: (41.036,26.517,18.132)
OP2: (40.620,26.240,15.617)
C3': (40.637,21.665,17.846)
C1': (38.782,20.784,16.702)
C5': (39.504,23.890,18.404)
O4': (38.436,22.044,17.254)
C8: (39.028,22.090,14.504)
O2': (39.702,19.530,18.530)
C6: (39.251,19.614,12.015)
C5: (39.161,20.484,13.114)
C4: (39.056,19.903,14.366)
P: (40.193,26.006,17.020)
C4': (39.385,22.389,18.294)
C2': (40.056,20.326,17.413)
C2: (39.160,17.870,13.536)
N1: (39.263,18.285,12.268)
N3: (39.045,18.589,14.652)
N6: (39.312,20.025,10.737)
N7: (39.152,21.869,13.213)
N9: (38.953,20.940,15.256)
O5': (40.057,24.429,17.207)
O3': (41.540,21.521,18.931)
OP1: (38.591,13.189,22.768)
OP2: (39.638,11.528,21.108)
C3': (38.370,15.628,18.687)
C1': (40.380,15.759,17.468)
C5': (39.592,15.347,20.899)
O6: (42.183,10.655,14.883)
O4': (40.691,15.954,18.842)
C8: (40.698,13.282,17.921)
C2: (41.935,14.023,13.788)
C6: (41.948,11.862,14.947)
C5: (41.450,12.604,16.047)
C4: (41.244,13.958,15.897)
P: (39.642,12.862,21.776)
C4': (39.469,16.126,19.608)
C2': (38.886,16.050,17.319)
O2': (38.679,17.428,17.087)
N1: (42.168,12.673,13.835)
N2: (42.216,14.635,12.621)
N3: (41.463,14.728,14.807)
N7: (41.103,12.190,17.326)
N9: (40.757,14.391,17.110)
O5': (39.616,13.956,20.615)
O3': (37.133,16.248,19.015)
Image (generated by PyMOL):
PyMOL image
show in jmol