ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1168:A560

Extra

PDB:
ATOM 1 O3' G A1167 76.580-112.920 -22.970 1.00 61.02 O
ATOM 2 P A A1168 77.719-111.856 -22.605 1.00 71.06 P
ATOM 3 OP1 A A1168 77.060-110.741 -21.931 1.00 57.96 O
ATOM 4 OP2 A A1168 78.483-111.589 -23.844 1.00 58.51 O
ATOM 5 O5' A A1168 78.617-112.648 -21.572 1.00 86.74 O
ATOM 6 C5' A A1168 80.001-112.826 -21.807 1.00 92.84 C
ATOM 7 C4' A A1168 80.404-114.257 -21.613 1.00 88.60 C
ATOM 8 O4' A A1168 79.751-114.768 -20.422 1.00 76.44 O
ATOM 9 C3' A A1168 80.022-115.194 -22.751 1.00 84.48 C
ATOM 10 O3' A A1168 81.037-116.169 -22.924 1.00 86.38 O
ATOM 11 C2' A A1168 78.765-115.867 -22.236 1.00 85.67 C
ATOM 12 O2' A A1168 78.534-117.143 -22.780 1.00 86.75 O
ATOM 13 C1' A A1168 79.027-115.932 -20.734 1.00 75.77 C
ATOM 14 N9 A A1168 77.803-115.945 -19.920 1.00 59.11 N
ATOM 15 C8 A A1168 76.712-115.122 -20.056 1.00 63.14 C
ATOM 16 N7 A A1168 75.728-115.357 -19.216 1.00 53.25 N
ATOM 17 C5 A A1168 76.176-116.420 -18.466 1.00 48.69 C
ATOM 18 C6 A A1168 75.595-117.139 -17.399 1.00 53.47 C
ATOM 19 N6 A A1168 74.385-116.887 -16.882 1.00 52.57 N
ATOM 20 N1 A A1168 76.301-118.145 -16.842 1.00 50.47 N
ATOM 21 C2 A A1168 77.512-118.391 -17.349 1.00 53.25 C
ATOM 22 N3 A A1168 78.158-117.781 -18.345 1.00 63.04 N
ATOM 23 C4 A A1168 77.441-116.788 -18.885 1.00 55.54 C
ATOM 24 P C A1169 82.305-115.851 -23.853 1.00 66.68 P
ATOM 25 OP1 C A1169 83.522-116.240 -23.095 1.00117.62 O
ATOM 26 OP2 C A1169 82.173-114.454 -24.312 1.00111.28 O
ATOM 27 O5' C A1169 82.098-116.842 -25.074 1.00 68.31 O
TER

ATOM 1 O3' G B 559 87.116-121.146 -16.128 1.00101.55 O
ATOM 2 P G B 560 86.761-119.624 -15.775 1.00133.91 P
ATOM 3 OP1 G B 560 87.859-118.786 -16.288 1.00100.57 O
ATOM 4 OP2 G B 560 86.442-119.567 -14.333 1.00 91.14 O
ATOM 5 O5' G B 560 85.449-119.369 -16.626 1.00 76.53 O
ATOM 6 C5' G B 560 84.599-118.290 -16.307 1.00 67.84 C
ATOM 7 C4' G B 560 83.245-118.417 -16.945 1.00 56.89 C
ATOM 8 O4' G B 560 82.645-119.691 -16.585 1.00 63.59 O
ATOM 9 C3' G B 560 82.236-117.388 -16.482 1.00 58.29 C
ATOM 10 O3' G B 560 82.366-116.150 -17.152 1.00 51.82 O
ATOM 11 C2' G B 560 80.906-118.086 -16.700 1.00 51.51 C
ATOM 12 O2' G B 560 80.552-118.047 -18.066 1.00 61.80 O
ATOM 13 C1' G B 560 81.267-119.527 -16.327 1.00 56.34 C
ATOM 14 N9 G B 560 81.039-119.794 -14.894 1.00 64.40 N
ATOM 15 C8 G B 560 82.000-120.094 -13.971 1.00 66.97 C
ATOM 16 N7 G B 560 81.531-120.257 -12.765 1.00 67.05 N
ATOM 17 C5 G B 560 80.169-120.052 -12.883 1.00 67.44 C
ATOM 18 C6 G B 560 79.124-120.086 -11.910 1.00 73.07 C
ATOM 19 O6 G B 560 79.152-120.320 -10.683 1.00 70.58 O
ATOM 20 N1 G B 560 77.904-119.795 -12.497 1.00 70.68 N
ATOM 21 C2 G B 560 77.694-119.529 -13.817 1.00 70.44 C
ATOM 22 N2 G B 560 76.428-119.276 -14.181 1.00 77.72 N
ATOM 23 N3 G B 560 78.648-119.501 -14.721 1.00 73.95 N
ATOM 24 C4 G B 560 79.856-119.767 -14.194 1.00 69.97 C
ATOM 25 P G B 561 82.532-114.799 -16.297 1.00 56.45 P
ATOM 26 OP1 G B 561 83.097-113.780 -17.186 1.00 56.16 O
ATOM 27 OP2 G B 561 83.251-115.136 -15.068 1.00 50.56 O
ATOM 28 O5' G B 561 81.036-114.439 -15.950 1.00 54.46 O
TER

Atoms:
OP1: (77.060,-110.741,-21.931)
OP2: (78.483,-111.589,-23.844)
C3': (80.022,-115.194,-22.751)
C1': (79.027,-115.932,-20.734)
C5': (80.001,-112.826,-21.807)
O4': (79.751,-114.768,-20.422)
C8: (76.712,-115.122,-20.056)
O2': (78.534,-117.143,-22.780)
C6: (75.595,-117.139,-17.399)
C5: (76.176,-116.420,-18.466)
C4: (77.441,-116.788,-18.885)
P: (77.719,-111.856,-22.605)
C4': (80.404,-114.257,-21.613)
C2': (78.765,-115.867,-22.236)
C2: (77.512,-118.391,-17.349)
N1: (76.301,-118.145,-16.842)
N3: (78.158,-117.781,-18.345)
N6: (74.385,-116.887,-16.882)
N7: (75.728,-115.357,-19.216)
N9: (77.803,-115.945,-19.920)
O5': (78.617,-112.648,-21.572)
O3': (81.037,-116.169,-22.924)
OP1: (87.859,-118.786,-16.288)
OP2: (86.442,-119.567,-14.333)
C3': (82.236,-117.388,-16.482)
C1': (81.267,-119.527,-16.327)
C5': (84.599,-118.290,-16.307)
O6: (79.152,-120.320,-10.683)
O4': (82.645,-119.691,-16.585)
C8: (82.000,-120.094,-13.971)
C2: (77.694,-119.529,-13.817)
C6: (79.124,-120.086,-11.910)
C5: (80.169,-120.052,-12.883)
C4: (79.856,-119.767,-14.194)
P: (86.761,-119.624,-15.775)
C4': (83.245,-118.417,-16.945)
C2': (80.906,-118.086,-16.700)
O2': (80.552,-118.047,-18.066)
N1: (77.904,-119.795,-12.497)
N2: (76.428,-119.276,-14.181)
N3: (78.648,-119.501,-14.721)
N7: (81.531,-120.257,-12.765)
N9: (81.039,-119.794,-14.894)
O5': (85.449,-119.369,-16.626)
O3': (82.366,-116.150,-17.152)
Image (generated by PyMOL):
PyMOL image
show in jmol