Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A351:A111
Extra
PDB:
ATOM 1 O3' C A 350 -61.836 -4.485 -68.303 1.00 22.47 O
ATOM 2 P A A 351 -62.990 -4.206 -67.225 1.00 17.47 P
ATOM 3 OP1 A A 351 -62.913 -5.289 -66.219 1.00 17.47 O
ATOM 4 OP2 A A 351 -64.262 -4.012 -67.970 1.00 17.47 O
ATOM 5 O5' A A 351 -62.523 -2.823 -66.582 1.00 17.47 O
ATOM 6 C5' A A 351 -62.748 -1.596 -67.269 1.00 17.47 C
ATOM 7 C4' A A 351 -61.473 -0.819 -67.451 1.00 17.47 C
ATOM 8 O4' A A 351 -60.970 -0.409 -66.155 1.00 17.47 O
ATOM 9 C3' A A 351 -60.311 -1.574 -68.080 1.00 17.47 C
ATOM 10 O3' A A 351 -60.376 -1.604 -69.488 1.00 17.47 O
ATOM 11 C2' A A 351 -59.093 -0.824 -67.551 1.00 17.47 C
ATOM 12 O2' A A 351 -58.840 0.361 -68.313 1.00 17.47 O
ATOM 13 C1' A A 351 -59.557 -0.431 -66.148 1.00 17.47 C
ATOM 14 N9 A A 351 -59.121 -1.402 -65.131 1.00 17.77 N
ATOM 15 C8 A A 351 -59.888 -2.446 -64.685 1.00 17.77 C
ATOM 16 N7 A A 351 -59.302 -3.169 -63.765 1.00 17.77 N
ATOM 17 C5 A A 351 -58.064 -2.562 -63.605 1.00 17.77 C
ATOM 18 C6 A A 351 -56.986 -2.875 -62.771 1.00 17.77 C
ATOM 19 N6 A A 351 -57.019 -3.925 -61.935 1.00 17.77 N
ATOM 20 N1 A A 351 -55.895 -2.077 -62.819 1.00 17.77 N
ATOM 21 C2 A A 351 -55.893 -1.052 -63.665 1.00 17.77 C
ATOM 22 N3 A A 351 -56.849 -0.672 -64.503 1.00 17.77 N
ATOM 23 C4 A A 351 -57.930 -1.468 -64.429 1.00 17.77 C
ATOM 24 P G A 352 -59.090 -2.037 -70.352 1.00 8.07 P
ATOM 25 OP1 G A 352 -59.513 -3.192 -71.170 1.00 8.07 O
ATOM 26 OP2 G A 352 -57.944 -2.200 -69.418 1.00 8.07 O
ATOM 27 O5' G A 352 -58.836 -0.776 -71.288 1.00 8.07 O
TER
ATOM 1 O3' G B 110 -59.564 6.466 -74.902 1.00 20.35 O
ATOM 2 P G B 111 -59.753 7.077 -73.419 1.00 24.27 P
ATOM 3 OP1 G B 111 -61.111 7.691 -73.355 1.00 24.27 O
ATOM 4 OP2 G B 111 -58.568 7.926 -73.129 1.00 24.27 O
ATOM 5 O5' G B 111 -59.702 5.770 -72.515 1.00 24.27 O
ATOM 6 C5' G B 111 -60.425 4.601 -72.883 1.00 24.27 C
ATOM 7 C4' G B 111 -60.347 3.562 -71.807 1.00 24.27 C
ATOM 8 O4' G B 111 -59.048 2.933 -71.842 1.00 24.27 O
ATOM 9 C3' G B 111 -60.461 4.083 -70.385 1.00 24.27 C
ATOM 10 O3' G B 111 -61.801 4.313 -69.989 1.00 24.27 O
ATOM 11 C2' G B 111 -59.754 3.001 -69.577 1.00 24.27 C
ATOM 12 O2' G B 111 -60.603 1.881 -69.364 1.00 24.27 O
ATOM 13 C1' G B 111 -58.645 2.586 -70.534 1.00 24.27 C
ATOM 14 N9 G B 111 -57.375 3.258 -70.249 1.00 23.73 N
ATOM 15 C8 G B 111 -56.797 4.195 -71.056 1.00 23.73 C
ATOM 16 N7 G B 111 -55.652 4.610 -70.595 1.00 23.73 N
ATOM 17 C5 G B 111 -55.465 3.895 -69.425 1.00 23.73 C
ATOM 18 C6 G B 111 -54.395 3.922 -68.506 1.00 23.73 C
ATOM 19 O6 G B 111 -53.383 4.597 -68.544 1.00 23.73 O
ATOM 20 N1 G B 111 -54.558 3.056 -67.459 1.00 23.73 N
ATOM 21 C2 G B 111 -55.647 2.261 -67.318 1.00 23.73 C
ATOM 22 N2 G B 111 -55.616 1.500 -66.225 1.00 23.73 N
ATOM 23 N3 G B 111 -56.676 2.202 -68.166 1.00 23.73 N
ATOM 24 C4 G B 111 -56.516 3.045 -69.200 1.00 23.73 C
ATOM 25 P U B 112 -62.133 5.296 -68.755 1.00 17.82 P
ATOM 26 OP1 U B 112 -63.581 5.138 -68.455 1.00 17.82 O
ATOM 27 OP2 U B 112 -61.615 6.647 -69.105 1.00 17.82 O
ATOM 28 O5' U B 112 -61.275 4.685 -67.572 1.00 17.82 O
TER
ATOM 2 P A A 351 -62.990 -4.206 -67.225 1.00 17.47 P
ATOM 3 OP1 A A 351 -62.913 -5.289 -66.219 1.00 17.47 O
ATOM 4 OP2 A A 351 -64.262 -4.012 -67.970 1.00 17.47 O
ATOM 5 O5' A A 351 -62.523 -2.823 -66.582 1.00 17.47 O
ATOM 6 C5' A A 351 -62.748 -1.596 -67.269 1.00 17.47 C
ATOM 7 C4' A A 351 -61.473 -0.819 -67.451 1.00 17.47 C
ATOM 8 O4' A A 351 -60.970 -0.409 -66.155 1.00 17.47 O
ATOM 9 C3' A A 351 -60.311 -1.574 -68.080 1.00 17.47 C
ATOM 10 O3' A A 351 -60.376 -1.604 -69.488 1.00 17.47 O
ATOM 11 C2' A A 351 -59.093 -0.824 -67.551 1.00 17.47 C
ATOM 12 O2' A A 351 -58.840 0.361 -68.313 1.00 17.47 O
ATOM 13 C1' A A 351 -59.557 -0.431 -66.148 1.00 17.47 C
ATOM 14 N9 A A 351 -59.121 -1.402 -65.131 1.00 17.77 N
ATOM 15 C8 A A 351 -59.888 -2.446 -64.685 1.00 17.77 C
ATOM 16 N7 A A 351 -59.302 -3.169 -63.765 1.00 17.77 N
ATOM 17 C5 A A 351 -58.064 -2.562 -63.605 1.00 17.77 C
ATOM 18 C6 A A 351 -56.986 -2.875 -62.771 1.00 17.77 C
ATOM 19 N6 A A 351 -57.019 -3.925 -61.935 1.00 17.77 N
ATOM 20 N1 A A 351 -55.895 -2.077 -62.819 1.00 17.77 N
ATOM 21 C2 A A 351 -55.893 -1.052 -63.665 1.00 17.77 C
ATOM 22 N3 A A 351 -56.849 -0.672 -64.503 1.00 17.77 N
ATOM 23 C4 A A 351 -57.930 -1.468 -64.429 1.00 17.77 C
ATOM 24 P G A 352 -59.090 -2.037 -70.352 1.00 8.07 P
ATOM 25 OP1 G A 352 -59.513 -3.192 -71.170 1.00 8.07 O
ATOM 26 OP2 G A 352 -57.944 -2.200 -69.418 1.00 8.07 O
ATOM 27 O5' G A 352 -58.836 -0.776 -71.288 1.00 8.07 O
TER
ATOM 1 O3' G B 110 -59.564 6.466 -74.902 1.00 20.35 O
ATOM 2 P G B 111 -59.753 7.077 -73.419 1.00 24.27 P
ATOM 3 OP1 G B 111 -61.111 7.691 -73.355 1.00 24.27 O
ATOM 4 OP2 G B 111 -58.568 7.926 -73.129 1.00 24.27 O
ATOM 5 O5' G B 111 -59.702 5.770 -72.515 1.00 24.27 O
ATOM 6 C5' G B 111 -60.425 4.601 -72.883 1.00 24.27 C
ATOM 7 C4' G B 111 -60.347 3.562 -71.807 1.00 24.27 C
ATOM 8 O4' G B 111 -59.048 2.933 -71.842 1.00 24.27 O
ATOM 9 C3' G B 111 -60.461 4.083 -70.385 1.00 24.27 C
ATOM 10 O3' G B 111 -61.801 4.313 -69.989 1.00 24.27 O
ATOM 11 C2' G B 111 -59.754 3.001 -69.577 1.00 24.27 C
ATOM 12 O2' G B 111 -60.603 1.881 -69.364 1.00 24.27 O
ATOM 13 C1' G B 111 -58.645 2.586 -70.534 1.00 24.27 C
ATOM 14 N9 G B 111 -57.375 3.258 -70.249 1.00 23.73 N
ATOM 15 C8 G B 111 -56.797 4.195 -71.056 1.00 23.73 C
ATOM 16 N7 G B 111 -55.652 4.610 -70.595 1.00 23.73 N
ATOM 17 C5 G B 111 -55.465 3.895 -69.425 1.00 23.73 C
ATOM 18 C6 G B 111 -54.395 3.922 -68.506 1.00 23.73 C
ATOM 19 O6 G B 111 -53.383 4.597 -68.544 1.00 23.73 O
ATOM 20 N1 G B 111 -54.558 3.056 -67.459 1.00 23.73 N
ATOM 21 C2 G B 111 -55.647 2.261 -67.318 1.00 23.73 C
ATOM 22 N2 G B 111 -55.616 1.500 -66.225 1.00 23.73 N
ATOM 23 N3 G B 111 -56.676 2.202 -68.166 1.00 23.73 N
ATOM 24 C4 G B 111 -56.516 3.045 -69.200 1.00 23.73 C
ATOM 25 P U B 112 -62.133 5.296 -68.755 1.00 17.82 P
ATOM 26 OP1 U B 112 -63.581 5.138 -68.455 1.00 17.82 O
ATOM 27 OP2 U B 112 -61.615 6.647 -69.105 1.00 17.82 O
ATOM 28 O5' U B 112 -61.275 4.685 -67.572 1.00 17.82 O
TER
Atoms:
OP1: (-62.913,-5.289,-66.219)
OP2: (-64.262,-4.012,-67.970)
C3': (-60.311,-1.574,-68.080)
C1': (-59.557,-0.431,-66.148)
C5': (-62.748,-1.596,-67.269)
O4': (-60.970,-0.409,-66.155)
C8: (-59.888,-2.446,-64.685)
O2': (-58.840,0.361,-68.313)
C6: (-56.986,-2.875,-62.771)
C5: (-58.064,-2.562,-63.605)
C4: (-57.930,-1.468,-64.429)
P: (-62.990,-4.206,-67.225)
C4': (-61.473,-0.819,-67.451)
C2': (-59.093,-0.824,-67.551)
C2: (-55.893,-1.052,-63.665)
N1: (-55.895,-2.077,-62.819)
N3: (-56.849,-0.672,-64.503)
N6: (-57.019,-3.925,-61.935)
N7: (-59.302,-3.169,-63.765)
N9: (-59.121,-1.402,-65.131)
O5': (-62.523,-2.823,-66.582)
O3': (-60.376,-1.604,-69.488)
OP2: (-64.262,-4.012,-67.970)
C3': (-60.311,-1.574,-68.080)
C1': (-59.557,-0.431,-66.148)
C5': (-62.748,-1.596,-67.269)
O4': (-60.970,-0.409,-66.155)
C8: (-59.888,-2.446,-64.685)
O2': (-58.840,0.361,-68.313)
C6: (-56.986,-2.875,-62.771)
C5: (-58.064,-2.562,-63.605)
C4: (-57.930,-1.468,-64.429)
P: (-62.990,-4.206,-67.225)
C4': (-61.473,-0.819,-67.451)
C2': (-59.093,-0.824,-67.551)
C2: (-55.893,-1.052,-63.665)
N1: (-55.895,-2.077,-62.819)
N3: (-56.849,-0.672,-64.503)
N6: (-57.019,-3.925,-61.935)
N7: (-59.302,-3.169,-63.765)
N9: (-59.121,-1.402,-65.131)
O5': (-62.523,-2.823,-66.582)
O3': (-60.376,-1.604,-69.488)
OP1: (-61.111,7.691,-73.355)
OP2: (-58.568,7.926,-73.129)
C3': (-60.461,4.083,-70.385)
C1': (-58.645,2.586,-70.534)
C5': (-60.425,4.601,-72.883)
O6: (-53.383,4.597,-68.544)
O4': (-59.048,2.933,-71.842)
C8: (-56.797,4.195,-71.056)
C2: (-55.647,2.261,-67.318)
C6: (-54.395,3.922,-68.506)
C5: (-55.465,3.895,-69.425)
C4: (-56.516,3.045,-69.200)
P: (-59.753,7.077,-73.419)
C4': (-60.347,3.562,-71.807)
C2': (-59.754,3.001,-69.577)
O2': (-60.603,1.881,-69.364)
N1: (-54.558,3.056,-67.459)
N2: (-55.616,1.500,-66.225)
N3: (-56.676,2.202,-68.166)
N7: (-55.652,4.610,-70.595)
N9: (-57.375,3.258,-70.249)
O5': (-59.702,5.770,-72.515)
O3': (-61.801,4.313,-69.989)
OP2: (-58.568,7.926,-73.129)
C3': (-60.461,4.083,-70.385)
C1': (-58.645,2.586,-70.534)
C5': (-60.425,4.601,-72.883)
O6: (-53.383,4.597,-68.544)
O4': (-59.048,2.933,-71.842)
C8: (-56.797,4.195,-71.056)
C2: (-55.647,2.261,-67.318)
C6: (-54.395,3.922,-68.506)
C5: (-55.465,3.895,-69.425)
C4: (-56.516,3.045,-69.200)
P: (-59.753,7.077,-73.419)
C4': (-60.347,3.562,-71.807)
C2': (-59.754,3.001,-69.577)
O2': (-60.603,1.881,-69.364)
N1: (-54.558,3.056,-67.459)
N2: (-55.616,1.500,-66.225)
N3: (-56.676,2.202,-68.166)
N7: (-55.652,4.610,-70.595)
N9: (-57.375,3.258,-70.249)
O5': (-59.702,5.770,-72.515)
O3': (-61.801,4.313,-69.989)
Image (generated by PyMOL):