Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11113:11101
Extra
PDB:
ATOM 1 O3' U A1112 65.649 -10.244 20.280 1.00 35.36 O
ATOM 2 P A A1113 64.134 -9.654 20.382 1.00 35.47 P
ATOM 3 OP1 A A1113 63.306 -10.355 19.361 1.00 35.72 O
ATOM 4 OP2 A A1113 64.174 -8.178 20.363 1.00 35.45 O
ATOM 5 O5' A A1113 63.750 -10.201 21.768 1.00 35.10 O
ATOM 6 C5' A A1113 63.338 -11.542 21.823 1.00 35.11 C
ATOM 7 C4' A A1113 62.860 -11.876 23.156 1.00 34.75 C
ATOM 8 O4' A A1113 63.710 -11.219 24.120 1.00 34.53 O
ATOM 9 C3' A A1113 61.484 -11.365 23.481 1.00 34.56 C
ATOM 10 O3' A A1113 60.479 -12.206 22.935 1.00 34.68 O
ATOM 11 C2' A A1113 61.508 -11.273 25.024 1.00 34.18 C
ATOM 12 O2' A A1113 61.214 -12.510 25.624 1.00 34.07 O
ATOM 13 C1' A A1113 62.988 -10.985 25.309 1.00 34.19 C
ATOM 14 N9 A A1113 63.252 -9.605 25.774 1.00 34.05 N
ATOM 15 C8 A A1113 63.929 -8.735 24.973 1.00 34.27 C
ATOM 16 N7 A A1113 64.097 -7.572 25.489 1.00 34.13 N
ATOM 17 C5 A A1113 63.542 -7.660 26.738 1.00 33.81 C
ATOM 18 C6 A A1113 63.499 -6.660 27.731 1.00 33.57 C
ATOM 19 N6 A A1113 63.982 -5.418 27.606 1.00 33.63 N
ATOM 20 N1 A A1113 62.889 -7.031 28.860 1.00 33.29 N
ATOM 21 C2 A A1113 62.410 -8.292 28.982 1.00 33.25 C
ATOM 22 N3 A A1113 62.427 -9.305 28.101 1.00 33.46 N
ATOM 23 C4 A A1113 63.004 -8.925 26.951 1.00 33.75 C
ATOM 24 P A A1114 59.319 -11.602 22.020 1.00 37.20 P
ATOM 25 OP1 A A1114 58.561 -12.722 21.488 1.00 37.36 O
ATOM 26 OP2 A A1114 59.931 -10.635 21.055 1.00 37.45 O
ATOM 27 O5' A A1114 58.456 -10.823 23.082 1.00 36.86 O
TER
ATOM 1 O3' C B1100 54.400 -13.832 27.540 1.00 36.25 O
ATOM 2 P G B1101 55.369 -15.047 27.954 1.00 38.93 P
ATOM 3 OP1 G B1101 55.448 -15.925 26.742 1.00 39.27 O
ATOM 4 OP2 G B1101 54.862 -15.604 29.208 1.00 38.67 O
ATOM 5 O5' G B1101 56.744 -14.346 28.223 1.00 38.88 O
ATOM 6 C5' G B1101 57.397 -13.677 27.190 1.00 39.11 C
ATOM 7 C4' G B1101 58.545 -12.865 27.697 1.00 39.01 C
ATOM 8 O4' G B1101 58.085 -11.702 28.423 1.00 38.77 O
ATOM 9 C3' G B1101 59.523 -13.531 28.653 1.00 38.87 C
ATOM 10 O3' G B1101 60.378 -14.413 27.974 1.00 39.11 O
ATOM 11 C2' G B1101 60.249 -12.309 29.134 1.00 38.75 C
ATOM 12 O2' G B1101 61.056 -11.804 28.080 1.00 39.01 O
ATOM 13 C1' G B1101 59.083 -11.334 29.341 1.00 38.61 C
ATOM 14 N9 G B1101 58.544 -11.436 30.702 1.00 38.29 N
ATOM 15 C8 G B1101 57.433 -12.062 31.190 1.00 38.16 C
ATOM 16 N7 G B1101 57.325 -11.981 32.499 1.00 37.89 N
ATOM 17 C5 G B1101 58.450 -11.295 32.911 1.00 37.84 C
ATOM 18 C6 G B1101 58.921 -10.885 34.181 1.00 37.61 C
ATOM 19 O6 G B1101 58.458 -11.018 35.291 1.00 37.38 O
ATOM 20 N1 G B1101 60.093 -10.185 34.115 1.00 37.66 N
ATOM 21 C2 G B1101 60.747 -9.917 32.959 1.00 37.91 C
ATOM 22 N2 G B1101 61.863 -9.229 33.089 1.00 37.94 N
ATOM 23 N3 G B1101 60.355 -10.265 31.764 1.00 38.13 N
ATOM 24 C4 G B1101 59.196 -10.943 31.804 1.00 38.08 C
ATOM 25 P A B1102 60.907 -15.801 28.602 1.00 37.29 P
ATOM 26 OP1 A B1102 61.682 -16.462 27.529 1.00 37.63 O
ATOM 27 OP2 A B1102 59.774 -16.534 29.188 1.00 37.15 O
ATOM 28 O5' A B1102 61.877 -15.338 29.772 1.00 37.07 O
TER
ATOM 2 P A A1113 64.134 -9.654 20.382 1.00 35.47 P
ATOM 3 OP1 A A1113 63.306 -10.355 19.361 1.00 35.72 O
ATOM 4 OP2 A A1113 64.174 -8.178 20.363 1.00 35.45 O
ATOM 5 O5' A A1113 63.750 -10.201 21.768 1.00 35.10 O
ATOM 6 C5' A A1113 63.338 -11.542 21.823 1.00 35.11 C
ATOM 7 C4' A A1113 62.860 -11.876 23.156 1.00 34.75 C
ATOM 8 O4' A A1113 63.710 -11.219 24.120 1.00 34.53 O
ATOM 9 C3' A A1113 61.484 -11.365 23.481 1.00 34.56 C
ATOM 10 O3' A A1113 60.479 -12.206 22.935 1.00 34.68 O
ATOM 11 C2' A A1113 61.508 -11.273 25.024 1.00 34.18 C
ATOM 12 O2' A A1113 61.214 -12.510 25.624 1.00 34.07 O
ATOM 13 C1' A A1113 62.988 -10.985 25.309 1.00 34.19 C
ATOM 14 N9 A A1113 63.252 -9.605 25.774 1.00 34.05 N
ATOM 15 C8 A A1113 63.929 -8.735 24.973 1.00 34.27 C
ATOM 16 N7 A A1113 64.097 -7.572 25.489 1.00 34.13 N
ATOM 17 C5 A A1113 63.542 -7.660 26.738 1.00 33.81 C
ATOM 18 C6 A A1113 63.499 -6.660 27.731 1.00 33.57 C
ATOM 19 N6 A A1113 63.982 -5.418 27.606 1.00 33.63 N
ATOM 20 N1 A A1113 62.889 -7.031 28.860 1.00 33.29 N
ATOM 21 C2 A A1113 62.410 -8.292 28.982 1.00 33.25 C
ATOM 22 N3 A A1113 62.427 -9.305 28.101 1.00 33.46 N
ATOM 23 C4 A A1113 63.004 -8.925 26.951 1.00 33.75 C
ATOM 24 P A A1114 59.319 -11.602 22.020 1.00 37.20 P
ATOM 25 OP1 A A1114 58.561 -12.722 21.488 1.00 37.36 O
ATOM 26 OP2 A A1114 59.931 -10.635 21.055 1.00 37.45 O
ATOM 27 O5' A A1114 58.456 -10.823 23.082 1.00 36.86 O
TER
ATOM 1 O3' C B1100 54.400 -13.832 27.540 1.00 36.25 O
ATOM 2 P G B1101 55.369 -15.047 27.954 1.00 38.93 P
ATOM 3 OP1 G B1101 55.448 -15.925 26.742 1.00 39.27 O
ATOM 4 OP2 G B1101 54.862 -15.604 29.208 1.00 38.67 O
ATOM 5 O5' G B1101 56.744 -14.346 28.223 1.00 38.88 O
ATOM 6 C5' G B1101 57.397 -13.677 27.190 1.00 39.11 C
ATOM 7 C4' G B1101 58.545 -12.865 27.697 1.00 39.01 C
ATOM 8 O4' G B1101 58.085 -11.702 28.423 1.00 38.77 O
ATOM 9 C3' G B1101 59.523 -13.531 28.653 1.00 38.87 C
ATOM 10 O3' G B1101 60.378 -14.413 27.974 1.00 39.11 O
ATOM 11 C2' G B1101 60.249 -12.309 29.134 1.00 38.75 C
ATOM 12 O2' G B1101 61.056 -11.804 28.080 1.00 39.01 O
ATOM 13 C1' G B1101 59.083 -11.334 29.341 1.00 38.61 C
ATOM 14 N9 G B1101 58.544 -11.436 30.702 1.00 38.29 N
ATOM 15 C8 G B1101 57.433 -12.062 31.190 1.00 38.16 C
ATOM 16 N7 G B1101 57.325 -11.981 32.499 1.00 37.89 N
ATOM 17 C5 G B1101 58.450 -11.295 32.911 1.00 37.84 C
ATOM 18 C6 G B1101 58.921 -10.885 34.181 1.00 37.61 C
ATOM 19 O6 G B1101 58.458 -11.018 35.291 1.00 37.38 O
ATOM 20 N1 G B1101 60.093 -10.185 34.115 1.00 37.66 N
ATOM 21 C2 G B1101 60.747 -9.917 32.959 1.00 37.91 C
ATOM 22 N2 G B1101 61.863 -9.229 33.089 1.00 37.94 N
ATOM 23 N3 G B1101 60.355 -10.265 31.764 1.00 38.13 N
ATOM 24 C4 G B1101 59.196 -10.943 31.804 1.00 38.08 C
ATOM 25 P A B1102 60.907 -15.801 28.602 1.00 37.29 P
ATOM 26 OP1 A B1102 61.682 -16.462 27.529 1.00 37.63 O
ATOM 27 OP2 A B1102 59.774 -16.534 29.188 1.00 37.15 O
ATOM 28 O5' A B1102 61.877 -15.338 29.772 1.00 37.07 O
TER
Atoms:
OP1: (63.306,-10.355,19.361)
OP2: (64.174,-8.178,20.363)
C3': (61.484,-11.365,23.481)
C1': (62.988,-10.985,25.309)
C5': (63.338,-11.542,21.823)
O4': (63.710,-11.219,24.120)
C8: (63.929,-8.735,24.973)
O2': (61.214,-12.510,25.624)
C6: (63.499,-6.660,27.731)
C5: (63.542,-7.660,26.738)
C4: (63.004,-8.925,26.951)
P: (64.134,-9.654,20.382)
C4': (62.860,-11.876,23.156)
C2': (61.508,-11.273,25.024)
C2: (62.410,-8.292,28.982)
N1: (62.889,-7.031,28.860)
N3: (62.427,-9.305,28.101)
N6: (63.982,-5.418,27.606)
N7: (64.097,-7.572,25.489)
N9: (63.252,-9.605,25.774)
O5': (63.750,-10.201,21.768)
O3': (60.479,-12.206,22.935)
OP2: (64.174,-8.178,20.363)
C3': (61.484,-11.365,23.481)
C1': (62.988,-10.985,25.309)
C5': (63.338,-11.542,21.823)
O4': (63.710,-11.219,24.120)
C8: (63.929,-8.735,24.973)
O2': (61.214,-12.510,25.624)
C6: (63.499,-6.660,27.731)
C5: (63.542,-7.660,26.738)
C4: (63.004,-8.925,26.951)
P: (64.134,-9.654,20.382)
C4': (62.860,-11.876,23.156)
C2': (61.508,-11.273,25.024)
C2: (62.410,-8.292,28.982)
N1: (62.889,-7.031,28.860)
N3: (62.427,-9.305,28.101)
N6: (63.982,-5.418,27.606)
N7: (64.097,-7.572,25.489)
N9: (63.252,-9.605,25.774)
O5': (63.750,-10.201,21.768)
O3': (60.479,-12.206,22.935)
OP1: (55.448,-15.925,26.742)
OP2: (54.862,-15.604,29.208)
C3': (59.523,-13.531,28.653)
C1': (59.083,-11.334,29.341)
C5': (57.397,-13.677,27.190)
O6: (58.458,-11.018,35.291)
O4': (58.085,-11.702,28.423)
C8: (57.433,-12.062,31.190)
C2: (60.747,-9.917,32.959)
C6: (58.921,-10.885,34.181)
C5: (58.450,-11.295,32.911)
C4: (59.196,-10.943,31.804)
P: (55.369,-15.047,27.954)
C4': (58.545,-12.865,27.697)
C2': (60.249,-12.309,29.134)
O2': (61.056,-11.804,28.080)
N1: (60.093,-10.185,34.115)
N2: (61.863,-9.229,33.089)
N3: (60.355,-10.265,31.764)
N7: (57.325,-11.981,32.499)
N9: (58.544,-11.436,30.702)
O5': (56.744,-14.346,28.223)
O3': (60.378,-14.413,27.974)
OP2: (54.862,-15.604,29.208)
C3': (59.523,-13.531,28.653)
C1': (59.083,-11.334,29.341)
C5': (57.397,-13.677,27.190)
O6: (58.458,-11.018,35.291)
O4': (58.085,-11.702,28.423)
C8: (57.433,-12.062,31.190)
C2: (60.747,-9.917,32.959)
C6: (58.921,-10.885,34.181)
C5: (58.450,-11.295,32.911)
C4: (59.196,-10.943,31.804)
P: (55.369,-15.047,27.954)
C4': (58.545,-12.865,27.697)
C2': (60.249,-12.309,29.134)
O2': (61.056,-11.804,28.080)
N1: (60.093,-10.185,34.115)
N2: (61.863,-9.229,33.089)
N3: (60.355,-10.265,31.764)
N7: (57.325,-11.981,32.499)
N9: (58.544,-11.436,30.702)
O5': (56.744,-14.346,28.223)
O3': (60.378,-14.413,27.974)
Image (generated by PyMOL):