Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02638:02399
Extra
PDB:
ATOM 1 O3' G A2637 52.553 125.783 155.010 1.00 55.74 O
ATOM 2 P A A2638 52.433 126.990 153.959 1.00 57.41 P
ATOM 3 OP1 A A2638 53.393 128.056 154.336 1.00 56.94 O
ATOM 4 OP2 A A2638 50.999 127.328 153.798 1.00 56.82 O
ATOM 5 O5' A A2638 52.984 126.339 152.616 1.00 58.55 O
ATOM 6 C5' A A2638 53.073 127.112 151.416 1.00 58.82 C
ATOM 7 C4' A A2638 54.186 126.598 150.536 1.00 58.54 C
ATOM 8 O4' A A2638 53.991 125.190 150.244 1.00 58.09 O
ATOM 9 C3' A A2638 54.206 127.269 149.177 1.00 58.48 C
ATOM 10 O3' A A2638 54.912 128.499 149.245 1.00 58.88 O
ATOM 11 C2' A A2638 54.892 126.229 148.309 1.00 57.37 C
ATOM 12 O2' A A2638 56.288 126.232 148.511 1.00 58.48 O
ATOM 13 C1' A A2638 54.309 124.936 148.884 1.00 56.50 C
ATOM 14 N9 A A2638 53.094 124.464 148.218 1.00 55.43 N
ATOM 15 C8 A A2638 51.825 124.420 148.743 1.00 55.26 C
ATOM 16 N7 A A2638 50.939 123.890 147.942 1.00 55.09 N
ATOM 17 C5 A A2638 51.664 123.577 146.803 1.00 55.16 C
ATOM 18 C6 A A2638 51.295 122.983 145.587 1.00 55.44 C
ATOM 19 N6 A A2638 50.053 122.571 145.313 1.00 55.86 N
ATOM 20 N1 A A2638 52.255 122.821 144.650 1.00 54.99 N
ATOM 21 C2 A A2638 53.497 123.229 144.933 1.00 55.58 C
ATOM 22 N3 A A2638 53.968 123.795 146.042 1.00 55.72 N
ATOM 23 C4 A A2638 52.989 123.941 146.951 1.00 55.13 C
ATOM 24 P A A2639 54.120 129.853 149.602 1.00 58.78 P
ATOM 25 OP1 A A2639 54.751 130.426 150.827 1.00 57.24 O
ATOM 26 OP2 A A2639 52.649 129.569 149.586 1.00 55.46 O
ATOM 27 O5' A A2639 54.470 130.820 148.392 1.00 55.39 O
TER
ATOM 1 O3' U B2398 64.612 130.041 148.167 1.00 58.73 O
ATOM 2 P G B2399 64.074 129.121 149.374 1.00 59.09 P
ATOM 3 OP1 G B2399 64.172 129.895 150.634 1.00 58.61 O
ATOM 4 OP2 G B2399 64.755 127.799 149.265 1.00 58.54 O
ATOM 5 O5' G B2399 62.528 128.913 149.053 1.00 56.50 O
ATOM 6 C5' G B2399 61.577 129.966 149.277 1.00 51.61 C
ATOM 7 C4' G B2399 60.182 129.397 149.300 1.00 50.31 C
ATOM 8 O4' G B2399 59.903 128.792 148.013 1.00 49.06 O
ATOM 9 C3' G B2399 59.974 128.261 150.281 1.00 50.72 C
ATOM 10 O3' G B2399 59.711 128.726 151.590 1.00 53.37 O
ATOM 11 C2' G B2399 58.800 127.513 149.672 1.00 49.16 C
ATOM 12 O2' G B2399 57.554 128.134 149.919 1.00 49.27 O
ATOM 13 C1' G B2399 59.141 127.610 148.187 1.00 46.69 C
ATOM 14 N9 G B2399 59.950 126.492 147.719 1.00 43.93 N
ATOM 15 C8 G B2399 61.318 126.448 147.623 1.00 43.42 C
ATOM 16 N7 G B2399 61.760 125.320 147.143 1.00 44.23 N
ATOM 17 C5 G B2399 60.614 124.574 146.911 1.00 43.58 C
ATOM 18 C6 G B2399 60.459 123.269 146.371 1.00 44.25 C
ATOM 19 O6 G B2399 61.329 122.490 145.969 1.00 45.42 O
ATOM 20 N1 G B2399 59.123 122.901 146.308 1.00 45.30 N
ATOM 21 C2 G B2399 58.069 123.688 146.698 1.00 46.04 C
ATOM 22 N2 G B2399 56.846 123.164 146.530 1.00 46.72 N
ATOM 23 N3 G B2399 58.201 124.901 147.204 1.00 44.55 N
ATOM 24 C4 G B2399 59.491 125.280 147.275 1.00 43.78 C
ATOM 25 P C B2400 60.141 127.828 152.848 1.00 57.02 P
ATOM 26 OP1 C B2400 59.802 128.613 154.071 1.00 56.43 O
ATOM 27 OP2 C B2400 61.538 127.356 152.629 1.00 55.82 O
ATOM 28 O5' C B2400 59.173 126.566 152.768 1.00 55.69 O
TER
ATOM 2 P A A2638 52.433 126.990 153.959 1.00 57.41 P
ATOM 3 OP1 A A2638 53.393 128.056 154.336 1.00 56.94 O
ATOM 4 OP2 A A2638 50.999 127.328 153.798 1.00 56.82 O
ATOM 5 O5' A A2638 52.984 126.339 152.616 1.00 58.55 O
ATOM 6 C5' A A2638 53.073 127.112 151.416 1.00 58.82 C
ATOM 7 C4' A A2638 54.186 126.598 150.536 1.00 58.54 C
ATOM 8 O4' A A2638 53.991 125.190 150.244 1.00 58.09 O
ATOM 9 C3' A A2638 54.206 127.269 149.177 1.00 58.48 C
ATOM 10 O3' A A2638 54.912 128.499 149.245 1.00 58.88 O
ATOM 11 C2' A A2638 54.892 126.229 148.309 1.00 57.37 C
ATOM 12 O2' A A2638 56.288 126.232 148.511 1.00 58.48 O
ATOM 13 C1' A A2638 54.309 124.936 148.884 1.00 56.50 C
ATOM 14 N9 A A2638 53.094 124.464 148.218 1.00 55.43 N
ATOM 15 C8 A A2638 51.825 124.420 148.743 1.00 55.26 C
ATOM 16 N7 A A2638 50.939 123.890 147.942 1.00 55.09 N
ATOM 17 C5 A A2638 51.664 123.577 146.803 1.00 55.16 C
ATOM 18 C6 A A2638 51.295 122.983 145.587 1.00 55.44 C
ATOM 19 N6 A A2638 50.053 122.571 145.313 1.00 55.86 N
ATOM 20 N1 A A2638 52.255 122.821 144.650 1.00 54.99 N
ATOM 21 C2 A A2638 53.497 123.229 144.933 1.00 55.58 C
ATOM 22 N3 A A2638 53.968 123.795 146.042 1.00 55.72 N
ATOM 23 C4 A A2638 52.989 123.941 146.951 1.00 55.13 C
ATOM 24 P A A2639 54.120 129.853 149.602 1.00 58.78 P
ATOM 25 OP1 A A2639 54.751 130.426 150.827 1.00 57.24 O
ATOM 26 OP2 A A2639 52.649 129.569 149.586 1.00 55.46 O
ATOM 27 O5' A A2639 54.470 130.820 148.392 1.00 55.39 O
TER
ATOM 1 O3' U B2398 64.612 130.041 148.167 1.00 58.73 O
ATOM 2 P G B2399 64.074 129.121 149.374 1.00 59.09 P
ATOM 3 OP1 G B2399 64.172 129.895 150.634 1.00 58.61 O
ATOM 4 OP2 G B2399 64.755 127.799 149.265 1.00 58.54 O
ATOM 5 O5' G B2399 62.528 128.913 149.053 1.00 56.50 O
ATOM 6 C5' G B2399 61.577 129.966 149.277 1.00 51.61 C
ATOM 7 C4' G B2399 60.182 129.397 149.300 1.00 50.31 C
ATOM 8 O4' G B2399 59.903 128.792 148.013 1.00 49.06 O
ATOM 9 C3' G B2399 59.974 128.261 150.281 1.00 50.72 C
ATOM 10 O3' G B2399 59.711 128.726 151.590 1.00 53.37 O
ATOM 11 C2' G B2399 58.800 127.513 149.672 1.00 49.16 C
ATOM 12 O2' G B2399 57.554 128.134 149.919 1.00 49.27 O
ATOM 13 C1' G B2399 59.141 127.610 148.187 1.00 46.69 C
ATOM 14 N9 G B2399 59.950 126.492 147.719 1.00 43.93 N
ATOM 15 C8 G B2399 61.318 126.448 147.623 1.00 43.42 C
ATOM 16 N7 G B2399 61.760 125.320 147.143 1.00 44.23 N
ATOM 17 C5 G B2399 60.614 124.574 146.911 1.00 43.58 C
ATOM 18 C6 G B2399 60.459 123.269 146.371 1.00 44.25 C
ATOM 19 O6 G B2399 61.329 122.490 145.969 1.00 45.42 O
ATOM 20 N1 G B2399 59.123 122.901 146.308 1.00 45.30 N
ATOM 21 C2 G B2399 58.069 123.688 146.698 1.00 46.04 C
ATOM 22 N2 G B2399 56.846 123.164 146.530 1.00 46.72 N
ATOM 23 N3 G B2399 58.201 124.901 147.204 1.00 44.55 N
ATOM 24 C4 G B2399 59.491 125.280 147.275 1.00 43.78 C
ATOM 25 P C B2400 60.141 127.828 152.848 1.00 57.02 P
ATOM 26 OP1 C B2400 59.802 128.613 154.071 1.00 56.43 O
ATOM 27 OP2 C B2400 61.538 127.356 152.629 1.00 55.82 O
ATOM 28 O5' C B2400 59.173 126.566 152.768 1.00 55.69 O
TER
Atoms:
OP1: (53.393,128.056,154.336)
OP2: (50.999,127.328,153.798)
C3': (54.206,127.269,149.177)
C1': (54.309,124.936,148.884)
C5': (53.073,127.112,151.416)
O4': (53.991,125.190,150.244)
C8: (51.825,124.420,148.743)
O2': (56.288,126.232,148.511)
C6: (51.295,122.983,145.587)
C5: (51.664,123.577,146.803)
C4: (52.989,123.941,146.951)
P: (52.433,126.990,153.959)
C4': (54.186,126.598,150.536)
C2': (54.892,126.229,148.309)
C2: (53.497,123.229,144.933)
N1: (52.255,122.821,144.650)
N3: (53.968,123.795,146.042)
N6: (50.053,122.571,145.313)
N7: (50.939,123.890,147.942)
N9: (53.094,124.464,148.218)
O5': (52.984,126.339,152.616)
O3': (54.912,128.499,149.245)
OP2: (50.999,127.328,153.798)
C3': (54.206,127.269,149.177)
C1': (54.309,124.936,148.884)
C5': (53.073,127.112,151.416)
O4': (53.991,125.190,150.244)
C8: (51.825,124.420,148.743)
O2': (56.288,126.232,148.511)
C6: (51.295,122.983,145.587)
C5: (51.664,123.577,146.803)
C4: (52.989,123.941,146.951)
P: (52.433,126.990,153.959)
C4': (54.186,126.598,150.536)
C2': (54.892,126.229,148.309)
C2: (53.497,123.229,144.933)
N1: (52.255,122.821,144.650)
N3: (53.968,123.795,146.042)
N6: (50.053,122.571,145.313)
N7: (50.939,123.890,147.942)
N9: (53.094,124.464,148.218)
O5': (52.984,126.339,152.616)
O3': (54.912,128.499,149.245)
OP1: (64.172,129.895,150.634)
OP2: (64.755,127.799,149.265)
C3': (59.974,128.261,150.281)
C1': (59.141,127.610,148.187)
C5': (61.577,129.966,149.277)
O6: (61.329,122.490,145.969)
O4': (59.903,128.792,148.013)
C8: (61.318,126.448,147.623)
C2: (58.069,123.688,146.698)
C6: (60.459,123.269,146.371)
C5: (60.614,124.574,146.911)
C4: (59.491,125.280,147.275)
P: (64.074,129.121,149.374)
C4': (60.182,129.397,149.300)
C2': (58.800,127.513,149.672)
O2': (57.554,128.134,149.919)
N1: (59.123,122.901,146.308)
N2: (56.846,123.164,146.530)
N3: (58.201,124.901,147.204)
N7: (61.760,125.320,147.143)
N9: (59.950,126.492,147.719)
O5': (62.528,128.913,149.053)
O3': (59.711,128.726,151.590)
OP2: (64.755,127.799,149.265)
C3': (59.974,128.261,150.281)
C1': (59.141,127.610,148.187)
C5': (61.577,129.966,149.277)
O6: (61.329,122.490,145.969)
O4': (59.903,128.792,148.013)
C8: (61.318,126.448,147.623)
C2: (58.069,123.688,146.698)
C6: (60.459,123.269,146.371)
C5: (60.614,124.574,146.911)
C4: (59.491,125.280,147.275)
P: (64.074,129.121,149.374)
C4': (60.182,129.397,149.300)
C2': (58.800,127.513,149.672)
O2': (57.554,128.134,149.919)
N1: (59.123,122.901,146.308)
N2: (56.846,123.164,146.530)
N3: (58.201,124.901,147.204)
N7: (61.760,125.320,147.143)
N9: (59.950,126.492,147.719)
O5': (62.528,128.913,149.053)
O3': (59.711,128.726,151.590)
Image (generated by PyMOL):