ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A1298:A1235

Extra

PDB:
ATOM 1 O3' A A1297 -144.604 15.030 33.738 1.00 50.29 O
ATOM 2 P G A1298 -143.393 14.093 33.244 1.00 53.77 P
ATOM 3 OP1 G A1298 -143.706 12.702 33.671 1.00 53.77 O
ATOM 4 OP2 G A1298 -142.127 14.724 33.722 1.00 53.77 O
ATOM 5 O5' G A1298 -143.491 14.210 31.653 1.00 53.77 O
ATOM 6 C5' G A1298 -144.587 13.635 30.940 1.00 53.77 C
ATOM 7 C4' G A1298 -145.377 14.677 30.177 1.00 53.77 C
ATOM 8 O4' G A1298 -144.467 15.464 29.352 1.00 53.77 O
ATOM 9 C3' G A1298 -146.417 14.123 29.204 1.00 53.77 C
ATOM 10 O3' G A1298 -147.424 15.121 28.990 1.00 53.77 O
ATOM 11 C2' G A1298 -145.584 13.974 27.945 1.00 53.77 C
ATOM 12 O2' G A1298 -146.318 13.820 26.754 1.00 53.77 O
ATOM 13 C1' G A1298 -144.818 15.287 27.987 1.00 53.77 C
ATOM 14 N9 G A1298 -143.605 15.301 27.173 1.00 53.37 N
ATOM 15 C8 G A1298 -142.864 14.222 26.768 1.00 53.37 C
ATOM 16 N7 G A1298 -141.846 14.570 26.031 1.00 53.37 N
ATOM 17 C5 G A1298 -141.928 15.962 25.929 1.00 53.37 C
ATOM 18 C6 G A1298 -141.103 16.909 25.245 1.00 53.37 C
ATOM 19 O6 G A1298 -140.082 16.714 24.559 1.00 53.37 O
ATOM 20 N1 G A1298 -141.573 18.208 25.423 1.00 53.37 N
ATOM 21 C2 G A1298 -142.682 18.564 26.146 1.00 53.37 C
ATOM 22 N2 G A1298 -142.974 19.869 26.201 1.00 53.37 N
ATOM 23 N3 G A1298 -143.451 17.698 26.775 1.00 53.37 N
ATOM 24 C4 G A1298 -143.022 16.424 26.629 1.00 53.37 C
ATOM 25 P U A1299 -148.986 14.734 28.908 1.00 42.63 P
ATOM 26 OP1 U A1299 -149.149 13.404 29.552 1.00 42.63 O
ATOM 27 OP2 U A1299 -149.409 14.903 27.479 1.00 42.63 O
ATOM 28 O5' U A1299 -149.660 15.860 29.805 1.00 42.63 O
TER

ATOM 1 O3' A B1234 -144.734 25.183 21.626 1.00 43.67 O
ATOM 2 P C B1235 -144.087 25.984 22.853 1.00 32.29 P
ATOM 3 OP1 C B1235 -145.195 26.503 23.678 1.00 32.29 O
ATOM 4 OP2 C B1235 -143.117 26.951 22.292 1.00 32.29 O
ATOM 5 O5' C B1235 -143.314 24.837 23.638 1.00 32.29 O
ATOM 6 C5' C B1235 -143.833 23.518 23.712 1.00 32.29 C
ATOM 7 C4' C B1235 -142.732 22.518 23.942 1.00 32.29 C
ATOM 8 O4' C B1235 -142.070 22.229 22.679 1.00 32.29 O
ATOM 9 C3' C B1235 -141.605 22.973 24.863 1.00 32.29 C
ATOM 10 O3' C B1235 -141.906 22.803 26.236 1.00 32.29 O
ATOM 11 C2' C B1235 -140.429 22.135 24.392 1.00 32.29 C
ATOM 12 O2' C B1235 -140.487 20.828 24.939 1.00 32.29 O
ATOM 13 C1' C B1235 -140.685 22.061 22.884 1.00 32.29 C
ATOM 14 N1 C B1235 -139.971 23.137 22.164 1.00 32.82 N
ATOM 15 C2 C B1235 -138.687 22.886 21.657 1.00 32.82 C
ATOM 16 O2 C B1235 -138.220 21.745 21.811 1.00 32.82 O
ATOM 17 N3 C B1235 -138.001 23.887 21.026 1.00 32.82 N
ATOM 18 C4 C B1235 -138.552 25.105 20.897 1.00 32.82 C
ATOM 19 N4 C B1235 -137.869 26.064 20.261 1.00 32.82 N
ATOM 20 C5 C B1235 -139.854 25.384 21.421 1.00 32.82 C
ATOM 21 C6 C B1235 -140.518 24.390 22.041 1.00 32.82 C
ATOM 22 P A B1236 -140.834 23.219 27.376 1.00 32.81 P
ATOM 23 OP1 A B1236 -139.518 23.382 26.715 1.00 32.81 O
ATOM 24 OP2 A B1236 -140.956 22.227 28.472 1.00 32.81 O
ATOM 25 O5' A B1236 -141.371 24.634 27.869 1.00 32.81 O
TER

Atoms:
OP1: (-143.706,12.702,33.671)
OP2: (-142.127,14.724,33.722)
C3': (-146.417,14.123,29.204)
C1': (-144.818,15.287,27.987)
C5': (-144.587,13.635,30.940)
O6: (-140.082,16.714,24.559)
O4': (-144.467,15.464,29.352)
C8: (-142.864,14.222,26.768)
C2: (-142.682,18.564,26.146)
C6: (-141.103,16.909,25.245)
C5: (-141.928,15.962,25.929)
C4: (-143.022,16.424,26.629)
P: (-143.393,14.093,33.244)
C4': (-145.377,14.677,30.177)
C2': (-145.584,13.974,27.945)
O2': (-146.318,13.820,26.754)
N1: (-141.573,18.208,25.423)
N2: (-142.974,19.869,26.201)
N3: (-143.451,17.698,26.775)
N7: (-141.846,14.570,26.031)
N9: (-143.605,15.301,27.173)
O5': (-143.491,14.210,31.653)
O3': (-147.424,15.121,28.990)
C2: (-138.687,22.886,21.657)
OP1: (-145.195,26.503,23.678)
OP2: (-143.117,26.951,22.292)
C4: (-138.552,25.105,20.897)
O5': (-143.314,24.837,23.638)
C3': (-141.605,22.973,24.863)
C1': (-140.685,22.061,22.884)
O4': (-142.070,22.229,22.679)
C5': (-143.833,23.518,23.712)
P: (-144.087,25.984,22.853)
O2: (-138.220,21.745,21.811)
C4': (-142.732,22.518,23.942)
C2': (-140.429,22.135,24.392)
O2': (-140.487,20.828,24.939)
N1: (-139.971,23.137,22.164)
N3: (-138.001,23.887,21.026)
N4: (-137.869,26.064,20.261)
C6: (-140.518,24.390,22.041)
C5: (-139.854,25.384,21.421)
O3': (-141.906,22.803,26.236)
Image (generated by PyMOL):
PyMOL image
show in jmol