Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11378:1582
Extra
PDB:
ATOM 1 O3' A A1377 62.576 2.317 69.952 1.00 30.36 O
ATOM 2 P G A1378 62.106 1.634 71.321 1.00 33.00 P
ATOM 3 OP1 G A1378 61.774 2.663 72.283 1.00 33.09 O
ATOM 4 OP2 G A1378 63.105 0.636 71.662 1.00 33.05 O
ATOM 5 O5' G A1378 60.796 0.933 70.885 1.00 32.82 O
ATOM 6 C5' G A1378 59.573 1.445 71.269 1.00 32.77 C
ATOM 7 C4' G A1378 58.672 1.568 70.094 1.00 32.66 C
ATOM 8 O4' G A1378 59.336 1.176 68.862 1.00 32.63 O
ATOM 9 C3' G A1378 57.405 0.763 70.160 1.00 32.52 C
ATOM 10 O3' G A1378 56.364 1.648 69.846 1.00 32.49 O
ATOM 11 C2' G A1378 57.576 -0.257 69.030 1.00 32.44 C
ATOM 12 O2' G A1378 56.356 -0.678 68.482 1.00 32.32 O
ATOM 13 C1' G A1378 58.387 0.576 68.054 1.00 32.50 C
ATOM 14 N9 G A1378 59.070 -0.136 67.008 1.00 32.48 N
ATOM 15 C8 G A1378 59.610 -1.348 67.103 1.00 32.47 C
ATOM 16 N7 G A1378 60.218 -1.695 66.015 1.00 32.48 N
ATOM 17 C5 G A1378 60.062 -0.686 65.130 1.00 32.50 C
ATOM 18 C6 G A1378 60.533 -0.621 63.798 1.00 32.52 C
ATOM 19 O6 G A1378 61.188 -1.477 63.186 1.00 32.54 O
ATOM 20 N1 G A1378 60.143 0.585 63.221 1.00 32.55 N
ATOM 21 C2 G A1378 59.424 1.560 63.892 1.00 32.55 C
ATOM 22 N2 G A1378 59.158 2.638 63.178 1.00 32.60 N
ATOM 23 N3 G A1378 58.999 1.490 65.162 1.00 32.53 N
ATOM 24 C4 G A1378 59.344 0.316 65.733 1.00 32.50 C
ATOM 25 P A A1379 55.530 2.263 71.018 1.00 33.80 P
ATOM 26 OP1 A A1379 54.386 2.970 70.415 1.00 33.76 O
ATOM 27 OP2 A A1379 56.418 3.030 71.870 1.00 33.95 O
ATOM 28 O5' A A1379 55.021 0.945 71.729 1.00 33.72 O
TER
ATOM 1 O3' C B 581 57.680 3.624 53.640 1.00 36.84 O
ATOM 2 P C B 582 59.309 3.406 53.821 1.00 33.71 P
ATOM 3 OP1 C B 582 59.928 4.692 53.573 1.00 33.85 O
ATOM 4 OP2 C B 582 59.633 2.316 52.960 1.00 33.71 O
ATOM 5 O5' C B 582 59.603 2.965 55.321 1.00 33.62 O
ATOM 6 C5' C B 582 59.502 1.623 55.776 1.00 33.51 C
ATOM 7 C4' C B 582 59.567 1.604 57.288 1.00 33.45 C
ATOM 8 O4' C B 582 58.690 2.626 57.824 1.00 33.44 O
ATOM 9 C3' C B 582 59.130 0.343 57.997 1.00 33.33 C
ATOM 10 O3' C B 582 60.117 -0.631 58.023 1.00 33.36 O
ATOM 11 C2' C B 582 58.734 0.848 59.382 1.00 33.30 C
ATOM 12 O2' C B 582 59.867 1.046 60.213 1.00 33.37 O
ATOM 13 C1' C B 582 58.168 2.223 59.050 1.00 33.35 C
ATOM 14 N1 C B 582 56.737 2.252 58.953 1.00 33.27 N
ATOM 15 C2 C B 582 56.029 2.268 60.113 1.00 33.20 C
ATOM 16 O2 C B 582 56.643 2.160 61.131 1.00 33.21 O
ATOM 17 N3 C B 582 54.704 2.391 60.077 1.00 33.14 N
ATOM 18 C4 C B 582 54.134 2.520 58.875 1.00 33.16 C
ATOM 19 N4 C B 582 52.816 2.615 58.876 1.00 33.11 N
ATOM 20 C5 C B 582 54.848 2.537 57.647 1.00 33.23 C
ATOM 21 C6 C B 582 56.145 2.374 57.757 1.00 33.28 C
ATOM 22 P G B 583 59.698 -2.153 57.942 1.00 31.18 P
ATOM 23 OP1 G B 583 60.926 -2.943 57.910 1.00 31.25 O
ATOM 24 OP2 G B 583 58.765 -2.296 56.785 1.00 31.15 O
ATOM 25 O5' G B 583 58.888 -2.348 59.314 1.00 31.08 O
TER
ATOM 2 P G A1378 62.106 1.634 71.321 1.00 33.00 P
ATOM 3 OP1 G A1378 61.774 2.663 72.283 1.00 33.09 O
ATOM 4 OP2 G A1378 63.105 0.636 71.662 1.00 33.05 O
ATOM 5 O5' G A1378 60.796 0.933 70.885 1.00 32.82 O
ATOM 6 C5' G A1378 59.573 1.445 71.269 1.00 32.77 C
ATOM 7 C4' G A1378 58.672 1.568 70.094 1.00 32.66 C
ATOM 8 O4' G A1378 59.336 1.176 68.862 1.00 32.63 O
ATOM 9 C3' G A1378 57.405 0.763 70.160 1.00 32.52 C
ATOM 10 O3' G A1378 56.364 1.648 69.846 1.00 32.49 O
ATOM 11 C2' G A1378 57.576 -0.257 69.030 1.00 32.44 C
ATOM 12 O2' G A1378 56.356 -0.678 68.482 1.00 32.32 O
ATOM 13 C1' G A1378 58.387 0.576 68.054 1.00 32.50 C
ATOM 14 N9 G A1378 59.070 -0.136 67.008 1.00 32.48 N
ATOM 15 C8 G A1378 59.610 -1.348 67.103 1.00 32.47 C
ATOM 16 N7 G A1378 60.218 -1.695 66.015 1.00 32.48 N
ATOM 17 C5 G A1378 60.062 -0.686 65.130 1.00 32.50 C
ATOM 18 C6 G A1378 60.533 -0.621 63.798 1.00 32.52 C
ATOM 19 O6 G A1378 61.188 -1.477 63.186 1.00 32.54 O
ATOM 20 N1 G A1378 60.143 0.585 63.221 1.00 32.55 N
ATOM 21 C2 G A1378 59.424 1.560 63.892 1.00 32.55 C
ATOM 22 N2 G A1378 59.158 2.638 63.178 1.00 32.60 N
ATOM 23 N3 G A1378 58.999 1.490 65.162 1.00 32.53 N
ATOM 24 C4 G A1378 59.344 0.316 65.733 1.00 32.50 C
ATOM 25 P A A1379 55.530 2.263 71.018 1.00 33.80 P
ATOM 26 OP1 A A1379 54.386 2.970 70.415 1.00 33.76 O
ATOM 27 OP2 A A1379 56.418 3.030 71.870 1.00 33.95 O
ATOM 28 O5' A A1379 55.021 0.945 71.729 1.00 33.72 O
TER
ATOM 1 O3' C B 581 57.680 3.624 53.640 1.00 36.84 O
ATOM 2 P C B 582 59.309 3.406 53.821 1.00 33.71 P
ATOM 3 OP1 C B 582 59.928 4.692 53.573 1.00 33.85 O
ATOM 4 OP2 C B 582 59.633 2.316 52.960 1.00 33.71 O
ATOM 5 O5' C B 582 59.603 2.965 55.321 1.00 33.62 O
ATOM 6 C5' C B 582 59.502 1.623 55.776 1.00 33.51 C
ATOM 7 C4' C B 582 59.567 1.604 57.288 1.00 33.45 C
ATOM 8 O4' C B 582 58.690 2.626 57.824 1.00 33.44 O
ATOM 9 C3' C B 582 59.130 0.343 57.997 1.00 33.33 C
ATOM 10 O3' C B 582 60.117 -0.631 58.023 1.00 33.36 O
ATOM 11 C2' C B 582 58.734 0.848 59.382 1.00 33.30 C
ATOM 12 O2' C B 582 59.867 1.046 60.213 1.00 33.37 O
ATOM 13 C1' C B 582 58.168 2.223 59.050 1.00 33.35 C
ATOM 14 N1 C B 582 56.737 2.252 58.953 1.00 33.27 N
ATOM 15 C2 C B 582 56.029 2.268 60.113 1.00 33.20 C
ATOM 16 O2 C B 582 56.643 2.160 61.131 1.00 33.21 O
ATOM 17 N3 C B 582 54.704 2.391 60.077 1.00 33.14 N
ATOM 18 C4 C B 582 54.134 2.520 58.875 1.00 33.16 C
ATOM 19 N4 C B 582 52.816 2.615 58.876 1.00 33.11 N
ATOM 20 C5 C B 582 54.848 2.537 57.647 1.00 33.23 C
ATOM 21 C6 C B 582 56.145 2.374 57.757 1.00 33.28 C
ATOM 22 P G B 583 59.698 -2.153 57.942 1.00 31.18 P
ATOM 23 OP1 G B 583 60.926 -2.943 57.910 1.00 31.25 O
ATOM 24 OP2 G B 583 58.765 -2.296 56.785 1.00 31.15 O
ATOM 25 O5' G B 583 58.888 -2.348 59.314 1.00 31.08 O
TER
Atoms:
OP1: (61.774,2.663,72.283)
OP2: (63.105,0.636,71.662)
C3': (57.405,0.763,70.160)
C1': (58.387,0.576,68.054)
C5': (59.573,1.445,71.269)
O6: (61.188,-1.477,63.186)
O4': (59.336,1.176,68.862)
C8: (59.610,-1.348,67.103)
C2: (59.424,1.560,63.892)
C6: (60.533,-0.621,63.798)
C5: (60.062,-0.686,65.130)
C4: (59.344,0.316,65.733)
P: (62.106,1.634,71.321)
C4': (58.672,1.568,70.094)
C2': (57.576,-0.257,69.030)
O2': (56.356,-0.678,68.482)
N1: (60.143,0.585,63.221)
N2: (59.158,2.638,63.178)
N3: (58.999,1.490,65.162)
N7: (60.218,-1.695,66.015)
N9: (59.070,-0.136,67.008)
O5': (60.796,0.933,70.885)
O3': (56.364,1.648,69.846)
OP2: (63.105,0.636,71.662)
C3': (57.405,0.763,70.160)
C1': (58.387,0.576,68.054)
C5': (59.573,1.445,71.269)
O6: (61.188,-1.477,63.186)
O4': (59.336,1.176,68.862)
C8: (59.610,-1.348,67.103)
C2: (59.424,1.560,63.892)
C6: (60.533,-0.621,63.798)
C5: (60.062,-0.686,65.130)
C4: (59.344,0.316,65.733)
P: (62.106,1.634,71.321)
C4': (58.672,1.568,70.094)
C2': (57.576,-0.257,69.030)
O2': (56.356,-0.678,68.482)
N1: (60.143,0.585,63.221)
N2: (59.158,2.638,63.178)
N3: (58.999,1.490,65.162)
N7: (60.218,-1.695,66.015)
N9: (59.070,-0.136,67.008)
O5': (60.796,0.933,70.885)
O3': (56.364,1.648,69.846)
C2: (56.029,2.268,60.113)
OP1: (59.928,4.692,53.573)
OP2: (59.633,2.316,52.960)
C4: (54.134,2.520,58.875)
O5': (59.603,2.965,55.321)
C3': (59.130,0.343,57.997)
C1': (58.168,2.223,59.050)
O4': (58.690,2.626,57.824)
C5': (59.502,1.623,55.776)
P: (59.309,3.406,53.821)
O2: (56.643,2.160,61.131)
C4': (59.567,1.604,57.288)
C2': (58.734,0.848,59.382)
O2': (59.867,1.046,60.213)
N1: (56.737,2.252,58.953)
N3: (54.704,2.391,60.077)
N4: (52.816,2.615,58.876)
C6: (56.145,2.374,57.757)
C5: (54.848,2.537,57.647)
O3': (60.117,-0.631,58.023)
OP1: (59.928,4.692,53.573)
OP2: (59.633,2.316,52.960)
C4: (54.134,2.520,58.875)
O5': (59.603,2.965,55.321)
C3': (59.130,0.343,57.997)
C1': (58.168,2.223,59.050)
O4': (58.690,2.626,57.824)
C5': (59.502,1.623,55.776)
P: (59.309,3.406,53.821)
O2: (56.643,2.160,61.131)
C4': (59.567,1.604,57.288)
C2': (58.734,0.848,59.382)
O2': (59.867,1.046,60.213)
N1: (56.737,2.252,58.953)
N3: (54.704,2.391,60.077)
N4: (52.816,2.615,58.876)
C6: (56.145,2.374,57.757)
C5: (54.848,2.537,57.647)
O3': (60.117,-0.631,58.023)
Image (generated by PyMOL):