Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01017:02332
Extra
PDB:
ATOM 1 O3' A A1016 57.535 95.024 114.068 1.00 36.48 O
ATOM 2 P A A1017 56.498 94.777 112.864 1.00 38.35 P
ATOM 3 OP1 A A1017 55.145 94.649 113.462 1.00 34.92 O
ATOM 4 OP2 A A1017 57.015 93.690 111.996 1.00 36.72 O
ATOM 5 O5' A A1017 56.539 96.145 112.051 1.00 38.26 O
ATOM 6 C5' A A1017 55.978 97.362 112.595 1.00 36.79 C
ATOM 7 C4' A A1017 56.301 98.523 111.685 1.00 37.21 C
ATOM 8 O4' A A1017 57.737 98.681 111.650 1.00 36.93 O
ATOM 9 C3' A A1017 55.901 98.307 110.231 1.00 37.77 C
ATOM 10 O3' A A1017 54.575 98.777 109.978 1.00 39.59 O
ATOM 11 C2' A A1017 56.905 99.166 109.478 1.00 36.53 C
ATOM 12 O2' A A1017 56.540 100.529 109.487 1.00 36.29 O
ATOM 13 C1' A A1017 58.156 99.001 110.337 1.00 36.40 C
ATOM 14 N9 A A1017 59.112 97.981 109.900 1.00 36.49 N
ATOM 15 C8 A A1017 59.014 96.618 110.025 1.00 36.26 C
ATOM 16 N7 A A1017 60.065 95.972 109.585 1.00 35.64 N
ATOM 17 C5 A A1017 60.906 96.973 109.124 1.00 34.80 C
ATOM 18 C6 A A1017 62.182 96.941 108.535 1.00 35.24 C
ATOM 19 N6 A A1017 62.858 95.818 108.290 1.00 35.01 N
ATOM 20 N1 A A1017 62.750 98.120 108.196 1.00 35.85 N
ATOM 21 C2 A A1017 62.072 99.247 108.431 1.00 36.38 C
ATOM 22 N3 A A1017 60.866 99.406 108.974 1.00 38.14 N
ATOM 23 C4 A A1017 60.329 98.215 109.303 1.00 36.23 C
ATOM 24 P G A1018 53.300 97.930 110.478 1.00 39.11 P
ATOM 25 OP1 G A1018 52.889 98.465 111.815 1.00 34.79 O
ATOM 26 OP2 G A1018 53.605 96.481 110.320 1.00 36.87 O
ATOM 27 O5' G A1018 52.180 98.306 109.414 1.00 36.95 O
TER
ATOM 1 O3' A B2331 54.071 109.316 111.503 1.00 35.39 O
ATOM 2 P G B2332 54.437 108.619 112.893 1.00 33.68 P
ATOM 3 OP1 G B2332 53.200 108.632 113.699 1.00 31.85 O
ATOM 4 OP2 G B2332 55.660 109.265 113.416 1.00 34.09 O
ATOM 5 O5' G B2332 54.826 107.128 112.484 1.00 33.21 O
ATOM 6 C5' G B2332 53.853 106.227 111.926 1.00 30.45 C
ATOM 7 C4' G B2332 54.516 104.937 111.492 1.00 30.36 C
ATOM 8 O4' G B2332 55.382 105.183 110.355 1.00 30.60 O
ATOM 9 C3' G B2332 55.432 104.272 112.504 1.00 31.54 C
ATOM 10 O3' G B2332 54.708 103.521 113.470 1.00 33.89 O
ATOM 11 C2' G B2332 56.300 103.396 111.612 1.00 30.43 C
ATOM 12 O2' G B2332 55.651 102.214 111.195 1.00 29.37 O
ATOM 13 C1' G B2332 56.503 104.317 110.410 1.00 29.55 C
ATOM 14 N9 G B2332 57.704 105.136 110.550 1.00 29.80 N
ATOM 15 C8 G B2332 57.774 106.439 110.986 1.00 28.79 C
ATOM 16 N7 G B2332 58.995 106.893 111.046 1.00 29.97 N
ATOM 17 C5 G B2332 59.779 105.830 110.616 1.00 30.60 C
ATOM 18 C6 G B2332 61.186 105.723 110.485 1.00 32.13 C
ATOM 19 O6 G B2332 62.050 106.573 110.745 1.00 35.41 O
ATOM 20 N1 G B2332 61.562 104.471 110.005 1.00 30.03 N
ATOM 21 C2 G B2332 60.698 103.454 109.696 1.00 29.42 C
ATOM 22 N2 G B2332 61.254 102.330 109.221 1.00 26.69 N
ATOM 23 N3 G B2332 59.384 103.535 109.834 1.00 29.08 N
ATOM 24 C4 G B2332 58.997 104.743 110.293 1.00 29.44 C
ATOM 25 P U B2333 55.216 103.482 114.991 1.00 33.46 P
ATOM 26 OP1 U B2333 54.178 102.731 115.742 1.00 32.39 O
ATOM 27 OP2 U B2333 55.581 104.849 115.427 1.00 34.12 O
ATOM 28 O5' U B2333 56.555 102.623 114.898 1.00 34.18 O
TER
ATOM 2 P A A1017 56.498 94.777 112.864 1.00 38.35 P
ATOM 3 OP1 A A1017 55.145 94.649 113.462 1.00 34.92 O
ATOM 4 OP2 A A1017 57.015 93.690 111.996 1.00 36.72 O
ATOM 5 O5' A A1017 56.539 96.145 112.051 1.00 38.26 O
ATOM 6 C5' A A1017 55.978 97.362 112.595 1.00 36.79 C
ATOM 7 C4' A A1017 56.301 98.523 111.685 1.00 37.21 C
ATOM 8 O4' A A1017 57.737 98.681 111.650 1.00 36.93 O
ATOM 9 C3' A A1017 55.901 98.307 110.231 1.00 37.77 C
ATOM 10 O3' A A1017 54.575 98.777 109.978 1.00 39.59 O
ATOM 11 C2' A A1017 56.905 99.166 109.478 1.00 36.53 C
ATOM 12 O2' A A1017 56.540 100.529 109.487 1.00 36.29 O
ATOM 13 C1' A A1017 58.156 99.001 110.337 1.00 36.40 C
ATOM 14 N9 A A1017 59.112 97.981 109.900 1.00 36.49 N
ATOM 15 C8 A A1017 59.014 96.618 110.025 1.00 36.26 C
ATOM 16 N7 A A1017 60.065 95.972 109.585 1.00 35.64 N
ATOM 17 C5 A A1017 60.906 96.973 109.124 1.00 34.80 C
ATOM 18 C6 A A1017 62.182 96.941 108.535 1.00 35.24 C
ATOM 19 N6 A A1017 62.858 95.818 108.290 1.00 35.01 N
ATOM 20 N1 A A1017 62.750 98.120 108.196 1.00 35.85 N
ATOM 21 C2 A A1017 62.072 99.247 108.431 1.00 36.38 C
ATOM 22 N3 A A1017 60.866 99.406 108.974 1.00 38.14 N
ATOM 23 C4 A A1017 60.329 98.215 109.303 1.00 36.23 C
ATOM 24 P G A1018 53.300 97.930 110.478 1.00 39.11 P
ATOM 25 OP1 G A1018 52.889 98.465 111.815 1.00 34.79 O
ATOM 26 OP2 G A1018 53.605 96.481 110.320 1.00 36.87 O
ATOM 27 O5' G A1018 52.180 98.306 109.414 1.00 36.95 O
TER
ATOM 1 O3' A B2331 54.071 109.316 111.503 1.00 35.39 O
ATOM 2 P G B2332 54.437 108.619 112.893 1.00 33.68 P
ATOM 3 OP1 G B2332 53.200 108.632 113.699 1.00 31.85 O
ATOM 4 OP2 G B2332 55.660 109.265 113.416 1.00 34.09 O
ATOM 5 O5' G B2332 54.826 107.128 112.484 1.00 33.21 O
ATOM 6 C5' G B2332 53.853 106.227 111.926 1.00 30.45 C
ATOM 7 C4' G B2332 54.516 104.937 111.492 1.00 30.36 C
ATOM 8 O4' G B2332 55.382 105.183 110.355 1.00 30.60 O
ATOM 9 C3' G B2332 55.432 104.272 112.504 1.00 31.54 C
ATOM 10 O3' G B2332 54.708 103.521 113.470 1.00 33.89 O
ATOM 11 C2' G B2332 56.300 103.396 111.612 1.00 30.43 C
ATOM 12 O2' G B2332 55.651 102.214 111.195 1.00 29.37 O
ATOM 13 C1' G B2332 56.503 104.317 110.410 1.00 29.55 C
ATOM 14 N9 G B2332 57.704 105.136 110.550 1.00 29.80 N
ATOM 15 C8 G B2332 57.774 106.439 110.986 1.00 28.79 C
ATOM 16 N7 G B2332 58.995 106.893 111.046 1.00 29.97 N
ATOM 17 C5 G B2332 59.779 105.830 110.616 1.00 30.60 C
ATOM 18 C6 G B2332 61.186 105.723 110.485 1.00 32.13 C
ATOM 19 O6 G B2332 62.050 106.573 110.745 1.00 35.41 O
ATOM 20 N1 G B2332 61.562 104.471 110.005 1.00 30.03 N
ATOM 21 C2 G B2332 60.698 103.454 109.696 1.00 29.42 C
ATOM 22 N2 G B2332 61.254 102.330 109.221 1.00 26.69 N
ATOM 23 N3 G B2332 59.384 103.535 109.834 1.00 29.08 N
ATOM 24 C4 G B2332 58.997 104.743 110.293 1.00 29.44 C
ATOM 25 P U B2333 55.216 103.482 114.991 1.00 33.46 P
ATOM 26 OP1 U B2333 54.178 102.731 115.742 1.00 32.39 O
ATOM 27 OP2 U B2333 55.581 104.849 115.427 1.00 34.12 O
ATOM 28 O5' U B2333 56.555 102.623 114.898 1.00 34.18 O
TER
Atoms:
OP1: (55.145,94.649,113.462)
OP2: (57.015,93.690,111.996)
C3': (55.901,98.307,110.231)
C1': (58.156,99.001,110.337)
C5': (55.978,97.362,112.595)
O4': (57.737,98.681,111.650)
C8: (59.014,96.618,110.025)
O2': (56.540,100.529,109.487)
C6: (62.182,96.941,108.535)
C5: (60.906,96.973,109.124)
C4: (60.329,98.215,109.303)
P: (56.498,94.777,112.864)
C4': (56.301,98.523,111.685)
C2': (56.905,99.166,109.478)
C2: (62.072,99.247,108.431)
N1: (62.750,98.120,108.196)
N3: (60.866,99.406,108.974)
N6: (62.858,95.818,108.290)
N7: (60.065,95.972,109.585)
N9: (59.112,97.981,109.900)
O5': (56.539,96.145,112.051)
O3': (54.575,98.777,109.978)
OP2: (57.015,93.690,111.996)
C3': (55.901,98.307,110.231)
C1': (58.156,99.001,110.337)
C5': (55.978,97.362,112.595)
O4': (57.737,98.681,111.650)
C8: (59.014,96.618,110.025)
O2': (56.540,100.529,109.487)
C6: (62.182,96.941,108.535)
C5: (60.906,96.973,109.124)
C4: (60.329,98.215,109.303)
P: (56.498,94.777,112.864)
C4': (56.301,98.523,111.685)
C2': (56.905,99.166,109.478)
C2: (62.072,99.247,108.431)
N1: (62.750,98.120,108.196)
N3: (60.866,99.406,108.974)
N6: (62.858,95.818,108.290)
N7: (60.065,95.972,109.585)
N9: (59.112,97.981,109.900)
O5': (56.539,96.145,112.051)
O3': (54.575,98.777,109.978)
OP1: (53.200,108.632,113.699)
OP2: (55.660,109.265,113.416)
C3': (55.432,104.272,112.504)
C1': (56.503,104.317,110.410)
C5': (53.853,106.227,111.926)
O6: (62.050,106.573,110.745)
O4': (55.382,105.183,110.355)
C8: (57.774,106.439,110.986)
C2: (60.698,103.454,109.696)
C6: (61.186,105.723,110.485)
C5: (59.779,105.830,110.616)
C4: (58.997,104.743,110.293)
P: (54.437,108.619,112.893)
C4': (54.516,104.937,111.492)
C2': (56.300,103.396,111.612)
O2': (55.651,102.214,111.195)
N1: (61.562,104.471,110.005)
N2: (61.254,102.330,109.221)
N3: (59.384,103.535,109.834)
N7: (58.995,106.893,111.046)
N9: (57.704,105.136,110.550)
O5': (54.826,107.128,112.484)
O3': (54.708,103.521,113.470)
OP2: (55.660,109.265,113.416)
C3': (55.432,104.272,112.504)
C1': (56.503,104.317,110.410)
C5': (53.853,106.227,111.926)
O6: (62.050,106.573,110.745)
O4': (55.382,105.183,110.355)
C8: (57.774,106.439,110.986)
C2: (60.698,103.454,109.696)
C6: (61.186,105.723,110.485)
C5: (59.779,105.830,110.616)
C4: (58.997,104.743,110.293)
P: (54.437,108.619,112.893)
C4': (54.516,104.937,111.492)
C2': (56.300,103.396,111.612)
O2': (55.651,102.214,111.195)
N1: (61.562,104.471,110.005)
N2: (61.254,102.330,109.221)
N3: (59.384,103.535,109.834)
N7: (58.995,106.893,111.046)
N9: (57.704,105.136,110.550)
O5': (54.826,107.128,112.484)
O3': (54.708,103.521,113.470)
Image (generated by PyMOL):