ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:01017:02332

Extra

PDB:
ATOM 1 O3' A A1016 57.708 94.489 114.171 1.00 41.64 O
ATOM 2 P A A1017 56.681 94.318 112.942 1.00 40.84 P
ATOM 3 OP1 A A1017 55.328 94.155 113.517 1.00 41.02 O
ATOM 4 OP2 A A1017 57.210 93.290 112.016 1.00 43.89 O
ATOM 5 O5' A A1017 56.733 95.721 112.194 1.00 38.71 O
ATOM 6 C5' A A1017 56.166 96.909 112.779 1.00 34.53 C
ATOM 7 C4' A A1017 56.456 98.091 111.888 1.00 38.79 C
ATOM 8 O4' A A1017 57.888 98.329 111.881 1.00 38.03 O
ATOM 9 C3' A A1017 56.093 97.859 110.424 1.00 40.22 C
ATOM 10 O3' A A1017 54.746 98.250 110.146 1.00 44.05 O
ATOM 11 C2' A A1017 57.063 98.783 109.699 1.00 38.84 C
ATOM 12 O2' A A1017 56.615 100.119 109.749 1.00 41.38 O
ATOM 13 C1' A A1017 58.315 98.664 110.570 1.00 38.08 C
ATOM 14 N9 A A1017 59.289 97.655 110.135 1.00 37.97 N
ATOM 15 C8 A A1017 59.221 96.292 110.303 1.00 38.97 C
ATOM 16 N7 A A1017 60.256 95.646 109.821 1.00 38.97 N
ATOM 17 C5 A A1017 61.061 96.647 109.299 1.00 39.54 C
ATOM 18 C6 A A1017 62.309 96.614 108.645 1.00 40.21 C
ATOM 19 N6 A A1017 62.985 95.492 108.394 1.00 36.59 N
ATOM 20 N1 A A1017 62.842 97.790 108.252 1.00 39.06 N
ATOM 21 C2 A A1017 62.159 98.917 108.497 1.00 40.42 C
ATOM 22 N3 A A1017 60.981 99.078 109.098 1.00 40.00 N
ATOM 23 C4 A A1017 60.478 97.890 109.482 1.00 38.91 C
ATOM 24 P G A1018 53.514 97.276 110.514 1.00 47.38 P
ATOM 25 OP1 G A1018 53.008 97.717 111.848 1.00 46.18 O
ATOM 26 OP2 G A1018 53.879 95.846 110.288 1.00 44.06 O
ATOM 27 O5' G A1018 52.422 97.656 109.421 1.00 47.75 O
TER

ATOM 1 O3' A B2331 54.156 109.083 112.087 1.00 42.52 O
ATOM 2 P G B2332 54.625 108.321 113.422 1.00 40.36 P
ATOM 3 OP1 G B2332 53.441 108.268 114.294 1.00 42.05 O
ATOM 4 OP2 G B2332 55.873 108.944 113.918 1.00 42.16 O
ATOM 5 O5' G B2332 54.971 106.845 112.934 1.00 40.92 O
ATOM 6 C5' G B2332 53.939 105.961 112.445 1.00 37.73 C
ATOM 7 C4' G B2332 54.557 104.695 111.901 1.00 37.22 C
ATOM 8 O4' G B2332 55.373 105.007 110.738 1.00 36.50 O
ATOM 9 C3' G B2332 55.526 103.988 112.838 1.00 36.16 C
ATOM 10 O3' G B2332 54.841 103.199 113.795 1.00 39.30 O
ATOM 11 C2' G B2332 56.351 103.157 111.867 1.00 36.38 C
ATOM 12 O2' G B2332 55.679 101.996 111.414 1.00 36.24 O
ATOM 13 C1' G B2332 56.501 104.142 110.703 1.00 35.08 C
ATOM 14 N9 G B2332 57.710 104.950 110.828 1.00 34.25 N
ATOM 15 C8 G B2332 57.810 106.235 111.312 1.00 34.42 C
ATOM 16 N7 G B2332 59.039 106.672 111.353 1.00 35.41 N
ATOM 17 C5 G B2332 59.795 105.616 110.855 1.00 36.91 C
ATOM 18 C6 G B2332 61.192 105.495 110.668 1.00 38.09 C
ATOM 19 O6 G B2332 62.075 106.319 110.909 1.00 39.61 O
ATOM 20 N1 G B2332 61.532 104.255 110.138 1.00 40.21 N
ATOM 21 C2 G B2332 60.643 103.263 109.819 1.00 38.08 C
ATOM 22 N2 G B2332 61.165 102.146 109.296 1.00 40.83 N
ATOM 23 N3 G B2332 59.340 103.360 109.995 1.00 38.02 N
ATOM 24 C4 G B2332 58.987 104.554 110.513 1.00 36.05 C
ATOM 25 P U B2333 55.396 103.109 115.303 1.00 39.65 P
ATOM 26 OP1 U B2333 54.361 102.388 116.072 1.00 39.70 O
ATOM 27 OP2 U B2333 55.855 104.455 115.760 1.00 37.91 O
ATOM 28 O5' U B2333 56.682 102.172 115.192 1.00 38.16 O
TER

Atoms:
OP1: (55.328,94.155,113.517)
OP2: (57.210,93.290,112.016)
C3': (56.093,97.859,110.424)
C1': (58.315,98.664,110.570)
C5': (56.166,96.909,112.779)
O4': (57.888,98.329,111.881)
C8: (59.221,96.292,110.303)
O2': (56.615,100.119,109.749)
C6: (62.309,96.614,108.645)
C5: (61.061,96.647,109.299)
C4: (60.478,97.890,109.482)
P: (56.681,94.318,112.942)
C4': (56.456,98.091,111.888)
C2': (57.063,98.783,109.699)
C2: (62.159,98.917,108.497)
N1: (62.842,97.790,108.252)
N3: (60.981,99.078,109.098)
N6: (62.985,95.492,108.394)
N7: (60.256,95.646,109.821)
N9: (59.289,97.655,110.135)
O5': (56.733,95.721,112.194)
O3': (54.746,98.250,110.146)
OP1: (53.441,108.268,114.294)
OP2: (55.873,108.944,113.918)
C3': (55.526,103.988,112.838)
C1': (56.501,104.142,110.703)
C5': (53.939,105.961,112.445)
O6: (62.075,106.319,110.909)
O4': (55.373,105.007,110.738)
C8: (57.810,106.235,111.312)
C2: (60.643,103.263,109.819)
C6: (61.192,105.495,110.668)
C5: (59.795,105.616,110.855)
C4: (58.987,104.554,110.513)
P: (54.625,108.321,113.422)
C4': (54.557,104.695,111.901)
C2': (56.351,103.157,111.867)
O2': (55.679,101.996,111.414)
N1: (61.532,104.255,110.138)
N2: (61.165,102.146,109.296)
N3: (59.340,103.360,109.995)
N7: (59.039,106.672,111.353)
N9: (57.710,104.950,110.828)
O5': (54.971,106.845,112.934)
O3': (54.841,103.199,113.795)
Image (generated by PyMOL):
PyMOL image
show in jmol