ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ6:02331:02018

Extra

PDB:
ATOM 1 O3' G A2330 56.426 114.795 111.043 1.00 48.97 O
ATOM 2 P A A2331 56.451 113.635 112.154 1.00 48.74 P
ATOM 3 OP1 A A2331 55.496 113.972 113.244 1.00 47.47 O
ATOM 4 OP2 A A2331 57.869 113.383 112.483 1.00 52.15 O
ATOM 5 O5' A A2331 55.899 112.358 111.380 1.00 48.42 O
ATOM 6 C5' A A2331 54.536 112.299 110.944 1.00 45.69 C
ATOM 7 C4' A A2331 54.313 111.069 110.107 1.00 46.27 C
ATOM 8 O4' A A2331 55.133 111.131 108.908 1.00 44.96 O
ATOM 9 C3' A A2331 54.716 109.758 110.761 1.00 45.95 C
ATOM 10 O3' A A2331 53.713 109.293 111.645 1.00 46.00 O
ATOM 11 C2' A A2331 54.911 108.847 109.558 1.00 46.57 C
ATOM 12 O2' A A2331 53.695 108.358 109.024 1.00 47.15 O
ATOM 13 C1' A A2331 55.554 109.817 108.560 1.00 46.61 C
ATOM 14 N9 A A2331 57.014 109.768 108.614 1.00 44.54 N
ATOM 15 C8 A A2331 57.884 110.705 109.109 1.00 43.19 C
ATOM 16 N7 A A2331 59.143 110.361 109.005 1.00 42.68 N
ATOM 17 C5 A A2331 59.101 109.116 108.402 1.00 42.61 C
ATOM 18 C6 A A2331 60.108 108.225 108.004 1.00 42.97 C
ATOM 19 N6 A A2331 61.410 108.474 108.135 1.00 42.35 N
ATOM 20 N1 A A2331 59.726 107.057 107.443 1.00 43.55 N
ATOM 21 C2 A A2331 58.418 106.823 107.279 1.00 43.81 C
ATOM 22 N3 A A2331 57.379 107.591 107.596 1.00 43.45 N
ATOM 23 C4 A A2331 57.795 108.735 108.162 1.00 43.92 C
ATOM 24 P G A2332 54.130 108.606 113.035 1.00 43.25 P
ATOM 25 OP1 G A2332 52.926 108.629 113.898 1.00 45.07 O
ATOM 26 OP2 G A2332 55.384 109.225 113.512 1.00 46.56 O
ATOM 27 O5' G A2332 54.477 107.104 112.645 1.00 43.57 O
TER

ATOM 1 O3' C B2017 48.464 110.951 103.079 1.00 52.93 O
ATOM 2 P G B2018 47.671 111.416 104.394 1.00 56.38 P
ATOM 3 OP1 G B2018 46.833 110.292 104.911 1.00 57.24 O
ATOM 4 OP2 G B2018 47.061 112.745 104.148 1.00 55.07 O
ATOM 5 O5' G B2018 48.867 111.666 105.397 1.00 55.54 O
ATOM 6 C5' G B2018 48.682 111.665 106.806 1.00 54.27 C
ATOM 7 C4' G B2018 50.005 111.399 107.463 1.00 52.23 C
ATOM 8 O4' G B2018 50.277 109.976 107.420 1.00 50.80 O
ATOM 9 C3' G B2018 51.172 112.077 106.756 1.00 52.33 C
ATOM 10 O3' G B2018 52.128 112.500 107.709 1.00 54.39 O
ATOM 11 C2' G B2018 51.698 110.972 105.846 1.00 50.44 C
ATOM 12 O2' G B2018 53.056 111.103 105.499 1.00 50.97 O
ATOM 13 C1' G B2018 51.475 109.737 106.711 1.00 48.60 C
ATOM 14 N9 G B2018 51.311 108.502 105.947 1.00 45.90 N
ATOM 15 C8 G B2018 50.260 108.155 105.133 1.00 42.64 C
ATOM 16 N7 G B2018 50.393 106.968 104.607 1.00 41.39 N
ATOM 17 C5 G B2018 51.603 106.506 105.097 1.00 41.63 C
ATOM 18 C6 G B2018 52.267 105.274 104.894 1.00 41.66 C
ATOM 19 O6 G B2018 51.915 104.308 104.209 1.00 42.15 O
ATOM 20 N1 G B2018 53.463 105.219 105.597 1.00 42.11 N
ATOM 21 C2 G B2018 53.956 106.214 106.389 1.00 39.56 C
ATOM 22 N2 G B2018 55.121 105.974 106.972 1.00 39.50 N
ATOM 23 N3 G B2018 53.351 107.361 106.592 1.00 41.61 N
ATOM 24 C4 G B2018 52.186 107.441 105.921 1.00 43.41 C
ATOM 25 P G B2019 52.406 114.072 107.906 1.00 53.89 P
ATOM 26 OP1 G B2019 53.148 114.575 106.723 1.00 50.52 O
ATOM 27 OP2 G B2019 52.964 114.283 109.271 1.00 57.03 O
ATOM 28 O5' G B2019 50.961 114.740 107.926 1.00 52.00 O
TER

Atoms:
OP1: (55.496,113.972,113.244)
OP2: (57.869,113.383,112.483)
C3': (54.716,109.758,110.761)
C1': (55.554,109.817,108.560)
C5': (54.536,112.299,110.944)
O4': (55.133,111.131,108.908)
C8: (57.884,110.705,109.109)
O2': (53.695,108.358,109.024)
C6: (60.108,108.225,108.004)
C5: (59.101,109.116,108.402)
C4: (57.795,108.735,108.162)
P: (56.451,113.635,112.154)
C4': (54.313,111.069,110.107)
C2': (54.911,108.847,109.558)
C2: (58.418,106.823,107.279)
N1: (59.726,107.057,107.443)
N3: (57.379,107.591,107.596)
N6: (61.410,108.474,108.135)
N7: (59.143,110.361,109.005)
N9: (57.014,109.768,108.614)
O5': (55.899,112.358,111.380)
O3': (53.713,109.293,111.645)
OP1: (46.833,110.292,104.911)
OP2: (47.061,112.745,104.148)
C3': (51.172,112.077,106.756)
C1': (51.475,109.737,106.711)
C5': (48.682,111.665,106.806)
O6: (51.915,104.308,104.209)
O4': (50.277,109.976,107.420)
C8: (50.260,108.155,105.133)
C2: (53.956,106.214,106.389)
C6: (52.267,105.274,104.894)
C5: (51.603,106.506,105.097)
C4: (52.186,107.441,105.921)
P: (47.671,111.416,104.394)
C4': (50.005,111.399,107.463)
C2': (51.698,110.972,105.846)
O2': (53.056,111.103,105.499)
N1: (53.463,105.219,105.597)
N2: (55.121,105.974,106.972)
N3: (53.351,107.361,106.592)
N7: (50.393,106.968,104.607)
N9: (51.311,108.502,105.947)
O5': (48.867,111.666,105.397)
O3': (52.128,112.500,107.709)
Image (generated by PyMOL):
PyMOL image
show in jmol