Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A4:A74
Extra
PDB:
ATOM 1 O3' A A 3 -29.007 -0.398 -27.475 1.00 44.81 O
ATOM 2 P C A 4 -28.654 1.080 -26.966 1.00 49.88 P
ATOM 3 OP1 C A 4 -29.054 2.031 -28.027 1.00 53.93 O
ATOM 4 OP2 C A 4 -27.263 1.082 -26.463 1.00 48.09 O
ATOM 5 O5' C A 4 -29.654 1.277 -25.734 1.00 44.80 O
ATOM 6 C5' C A 4 -31.054 1.149 -25.945 1.00 44.03 C
ATOM 7 C4' C A 4 -31.782 0.998 -24.624 1.00 43.55 C
ATOM 8 O4' C A 4 -31.346 -0.219 -23.968 1.00 42.34 O
ATOM 9 C3' C A 4 -31.492 2.088 -23.607 1.00 43.60 C
ATOM 10 O3' C A 4 -32.300 3.231 -23.848 1.00 48.27 O
ATOM 11 C2' C A 4 -31.877 1.384 -22.313 1.00 39.42 C
ATOM 12 O2' C A 4 -33.274 1.332 -22.114 1.00 42.34 O
ATOM 13 C1' C A 4 -31.330 -0.018 -22.567 1.00 42.48 C
ATOM 14 N1 C A 4 -29.940 -0.184 -22.066 1.00 42.29 N
ATOM 15 C2 C A 4 -29.738 -0.466 -20.712 1.00 43.56 C
ATOM 16 O2 C A 4 -30.726 -0.573 -19.973 1.00 41.59 O
ATOM 17 N3 C A 4 -28.470 -0.614 -20.252 1.00 42.19 N
ATOM 18 C4 C A 4 -27.439 -0.490 -21.090 1.00 40.79 C
ATOM 19 N4 C A 4 -26.207 -0.646 -20.595 1.00 40.34 N
ATOM 20 C5 C A 4 -27.626 -0.202 -22.475 1.00 44.02 C
ATOM 21 C6 C A 4 -28.880 -0.057 -22.916 1.00 44.33 C
ATOM 22 P C A 5 -31.770 4.671 -23.400 1.00 47.47 P
ATOM 23 OP1 C A 5 -32.754 5.681 -23.852 1.00 50.75 O
ATOM 24 OP2 C A 5 -30.353 4.783 -23.817 1.00 45.66 O
ATOM 25 O5' C A 5 -31.843 4.593 -21.805 1.00 44.52 O
TER
ATOM 1 O3' U B 73 -24.544 -4.201 -9.422 1.00 49.91 O
ATOM 2 P G B 74 -25.776 -4.895 -10.169 1.00 56.76 P
ATOM 3 OP1 G B 74 -26.543 -5.673 -9.169 1.00 54.27 O
ATOM 4 OP2 G B 74 -25.238 -5.566 -11.373 1.00 61.89 O
ATOM 5 O5' G B 74 -26.683 -3.660 -10.628 1.00 50.24 O
ATOM 6 C5' G B 74 -27.478 -2.971 -9.670 1.00 50.07 C
ATOM 7 C4' G B 74 -28.631 -2.247 -10.342 1.00 48.70 C
ATOM 8 O4' G B 74 -28.135 -1.095 -11.066 1.00 45.91 O
ATOM 9 C3' G B 74 -29.376 -3.062 -11.388 1.00 49.15 C
ATOM 10 O3' G B 74 -30.376 -3.865 -10.777 1.00 47.97 O
ATOM 11 C2' G B 74 -29.996 -1.959 -12.236 1.00 44.66 C
ATOM 12 O2' G B 74 -31.153 -1.414 -11.633 1.00 46.54 O
ATOM 13 C1' G B 74 -28.872 -0.927 -12.262 1.00 42.31 C
ATOM 14 N9 G B 74 -27.958 -1.092 -13.388 1.00 39.46 N
ATOM 15 C8 G B 74 -26.609 -1.350 -13.331 1.00 41.20 C
ATOM 16 N7 G B 74 -26.046 -1.449 -14.504 1.00 36.51 N
ATOM 17 C5 G B 74 -27.089 -1.247 -15.398 1.00 37.87 C
ATOM 18 C6 G B 74 -27.086 -1.238 -16.812 1.00 40.97 C
ATOM 19 O6 G B 74 -26.129 -1.415 -17.580 1.00 40.71 O
ATOM 20 N1 G B 74 -28.358 -0.993 -17.327 1.00 42.41 N
ATOM 21 C2 G B 74 -29.487 -0.784 -16.570 1.00 41.61 C
ATOM 22 N2 G B 74 -30.626 -0.564 -17.243 1.00 41.58 N
ATOM 23 N3 G B 74 -29.502 -0.788 -15.243 1.00 41.88 N
ATOM 24 C4 G B 74 -28.272 -1.025 -14.727 1.00 41.40 C
ATOM 25 P U B 75 -30.689 -5.314 -11.376 1.00 51.13 P
ATOM 26 OP1 U B 75 -31.564 -6.020 -10.414 1.00 49.53 O
ATOM 27 OP2 U B 75 -29.404 -5.919 -11.790 1.00 45.36 O
ATOM 28 O5' U B 75 -31.554 -4.988 -12.682 1.00 47.93 O
TER
ATOM 2 P C A 4 -28.654 1.080 -26.966 1.00 49.88 P
ATOM 3 OP1 C A 4 -29.054 2.031 -28.027 1.00 53.93 O
ATOM 4 OP2 C A 4 -27.263 1.082 -26.463 1.00 48.09 O
ATOM 5 O5' C A 4 -29.654 1.277 -25.734 1.00 44.80 O
ATOM 6 C5' C A 4 -31.054 1.149 -25.945 1.00 44.03 C
ATOM 7 C4' C A 4 -31.782 0.998 -24.624 1.00 43.55 C
ATOM 8 O4' C A 4 -31.346 -0.219 -23.968 1.00 42.34 O
ATOM 9 C3' C A 4 -31.492 2.088 -23.607 1.00 43.60 C
ATOM 10 O3' C A 4 -32.300 3.231 -23.848 1.00 48.27 O
ATOM 11 C2' C A 4 -31.877 1.384 -22.313 1.00 39.42 C
ATOM 12 O2' C A 4 -33.274 1.332 -22.114 1.00 42.34 O
ATOM 13 C1' C A 4 -31.330 -0.018 -22.567 1.00 42.48 C
ATOM 14 N1 C A 4 -29.940 -0.184 -22.066 1.00 42.29 N
ATOM 15 C2 C A 4 -29.738 -0.466 -20.712 1.00 43.56 C
ATOM 16 O2 C A 4 -30.726 -0.573 -19.973 1.00 41.59 O
ATOM 17 N3 C A 4 -28.470 -0.614 -20.252 1.00 42.19 N
ATOM 18 C4 C A 4 -27.439 -0.490 -21.090 1.00 40.79 C
ATOM 19 N4 C A 4 -26.207 -0.646 -20.595 1.00 40.34 N
ATOM 20 C5 C A 4 -27.626 -0.202 -22.475 1.00 44.02 C
ATOM 21 C6 C A 4 -28.880 -0.057 -22.916 1.00 44.33 C
ATOM 22 P C A 5 -31.770 4.671 -23.400 1.00 47.47 P
ATOM 23 OP1 C A 5 -32.754 5.681 -23.852 1.00 50.75 O
ATOM 24 OP2 C A 5 -30.353 4.783 -23.817 1.00 45.66 O
ATOM 25 O5' C A 5 -31.843 4.593 -21.805 1.00 44.52 O
TER
ATOM 1 O3' U B 73 -24.544 -4.201 -9.422 1.00 49.91 O
ATOM 2 P G B 74 -25.776 -4.895 -10.169 1.00 56.76 P
ATOM 3 OP1 G B 74 -26.543 -5.673 -9.169 1.00 54.27 O
ATOM 4 OP2 G B 74 -25.238 -5.566 -11.373 1.00 61.89 O
ATOM 5 O5' G B 74 -26.683 -3.660 -10.628 1.00 50.24 O
ATOM 6 C5' G B 74 -27.478 -2.971 -9.670 1.00 50.07 C
ATOM 7 C4' G B 74 -28.631 -2.247 -10.342 1.00 48.70 C
ATOM 8 O4' G B 74 -28.135 -1.095 -11.066 1.00 45.91 O
ATOM 9 C3' G B 74 -29.376 -3.062 -11.388 1.00 49.15 C
ATOM 10 O3' G B 74 -30.376 -3.865 -10.777 1.00 47.97 O
ATOM 11 C2' G B 74 -29.996 -1.959 -12.236 1.00 44.66 C
ATOM 12 O2' G B 74 -31.153 -1.414 -11.633 1.00 46.54 O
ATOM 13 C1' G B 74 -28.872 -0.927 -12.262 1.00 42.31 C
ATOM 14 N9 G B 74 -27.958 -1.092 -13.388 1.00 39.46 N
ATOM 15 C8 G B 74 -26.609 -1.350 -13.331 1.00 41.20 C
ATOM 16 N7 G B 74 -26.046 -1.449 -14.504 1.00 36.51 N
ATOM 17 C5 G B 74 -27.089 -1.247 -15.398 1.00 37.87 C
ATOM 18 C6 G B 74 -27.086 -1.238 -16.812 1.00 40.97 C
ATOM 19 O6 G B 74 -26.129 -1.415 -17.580 1.00 40.71 O
ATOM 20 N1 G B 74 -28.358 -0.993 -17.327 1.00 42.41 N
ATOM 21 C2 G B 74 -29.487 -0.784 -16.570 1.00 41.61 C
ATOM 22 N2 G B 74 -30.626 -0.564 -17.243 1.00 41.58 N
ATOM 23 N3 G B 74 -29.502 -0.788 -15.243 1.00 41.88 N
ATOM 24 C4 G B 74 -28.272 -1.025 -14.727 1.00 41.40 C
ATOM 25 P U B 75 -30.689 -5.314 -11.376 1.00 51.13 P
ATOM 26 OP1 U B 75 -31.564 -6.020 -10.414 1.00 49.53 O
ATOM 27 OP2 U B 75 -29.404 -5.919 -11.790 1.00 45.36 O
ATOM 28 O5' U B 75 -31.554 -4.988 -12.682 1.00 47.93 O
TER
Atoms:
C2: (-29.738,-0.466,-20.712)
OP1: (-29.054,2.031,-28.027)
OP2: (-27.263,1.082,-26.463)
C4: (-27.439,-0.490,-21.090)
O5': (-29.654,1.277,-25.734)
C3': (-31.492,2.088,-23.607)
C1': (-31.330,-0.018,-22.567)
O4': (-31.346,-0.219,-23.968)
C5': (-31.054,1.149,-25.945)
P: (-28.654,1.080,-26.966)
O2: (-30.726,-0.573,-19.973)
C4': (-31.782,0.998,-24.624)
C2': (-31.877,1.384,-22.313)
O2': (-33.274,1.332,-22.114)
N1: (-29.940,-0.184,-22.066)
N3: (-28.470,-0.614,-20.252)
N4: (-26.207,-0.646,-20.595)
C6: (-28.880,-0.057,-22.916)
C5: (-27.626,-0.202,-22.475)
O3': (-32.300,3.231,-23.848)
OP1: (-29.054,2.031,-28.027)
OP2: (-27.263,1.082,-26.463)
C4: (-27.439,-0.490,-21.090)
O5': (-29.654,1.277,-25.734)
C3': (-31.492,2.088,-23.607)
C1': (-31.330,-0.018,-22.567)
O4': (-31.346,-0.219,-23.968)
C5': (-31.054,1.149,-25.945)
P: (-28.654,1.080,-26.966)
O2: (-30.726,-0.573,-19.973)
C4': (-31.782,0.998,-24.624)
C2': (-31.877,1.384,-22.313)
O2': (-33.274,1.332,-22.114)
N1: (-29.940,-0.184,-22.066)
N3: (-28.470,-0.614,-20.252)
N4: (-26.207,-0.646,-20.595)
C6: (-28.880,-0.057,-22.916)
C5: (-27.626,-0.202,-22.475)
O3': (-32.300,3.231,-23.848)
OP1: (-26.543,-5.673,-9.169)
OP2: (-25.238,-5.566,-11.373)
C3': (-29.376,-3.062,-11.388)
C1': (-28.872,-0.927,-12.262)
C5': (-27.478,-2.971,-9.670)
O6: (-26.129,-1.415,-17.580)
O4': (-28.135,-1.095,-11.066)
C8: (-26.609,-1.350,-13.331)
C2: (-29.487,-0.784,-16.570)
C6: (-27.086,-1.238,-16.812)
C5: (-27.089,-1.247,-15.398)
C4: (-28.272,-1.025,-14.727)
P: (-25.776,-4.895,-10.169)
C4': (-28.631,-2.247,-10.342)
C2': (-29.996,-1.959,-12.236)
O2': (-31.153,-1.414,-11.633)
N1: (-28.358,-0.993,-17.327)
N2: (-30.626,-0.564,-17.243)
N3: (-29.502,-0.788,-15.243)
N7: (-26.046,-1.449,-14.504)
N9: (-27.958,-1.092,-13.388)
O5': (-26.683,-3.660,-10.628)
O3': (-30.376,-3.865,-10.777)
OP2: (-25.238,-5.566,-11.373)
C3': (-29.376,-3.062,-11.388)
C1': (-28.872,-0.927,-12.262)
C5': (-27.478,-2.971,-9.670)
O6: (-26.129,-1.415,-17.580)
O4': (-28.135,-1.095,-11.066)
C8: (-26.609,-1.350,-13.331)
C2: (-29.487,-0.784,-16.570)
C6: (-27.086,-1.238,-16.812)
C5: (-27.089,-1.247,-15.398)
C4: (-28.272,-1.025,-14.727)
P: (-25.776,-4.895,-10.169)
C4': (-28.631,-2.247,-10.342)
C2': (-29.996,-1.959,-12.236)
O2': (-31.153,-1.414,-11.633)
N1: (-28.358,-0.993,-17.327)
N2: (-30.626,-0.564,-17.243)
N3: (-29.502,-0.788,-15.243)
N7: (-26.046,-1.449,-14.504)
N9: (-27.958,-1.092,-13.388)
O5': (-26.683,-3.660,-10.628)
O3': (-30.376,-3.865,-10.777)
Image (generated by PyMOL):