Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A488:A520
Extra
PDB:
ATOM 1 O3' A A 487 -48.416 59.282 73.431 1.00 46.36 O
ATOM 2 P A A 488 -49.618 58.499 72.709 1.00 46.02 P
ATOM 3 OP1 A A 488 -49.001 57.333 72.026 1.00 43.95 O
ATOM 4 OP2 A A 488 -50.407 59.477 71.912 1.00 41.88 O
ATOM 5 O5' A A 488 -50.561 58.006 73.895 1.00 15.66 O
ATOM 6 C5' A A 488 -51.388 56.857 73.715 1.00 17.91 C
ATOM 7 C4' A A 488 -51.909 56.389 75.032 1.00 19.46 C
ATOM 8 O4' A A 488 -50.805 56.235 75.951 1.00 20.00 O
ATOM 9 C3' A A 488 -52.850 57.362 75.705 1.00 20.28 C
ATOM 10 O3' A A 488 -54.168 57.083 75.273 1.00 21.97 O
ATOM 11 C2' A A 488 -52.681 57.016 77.180 1.00 20.71 C
ATOM 12 O2' A A 488 -53.422 55.860 77.542 1.00 21.51 O
ATOM 13 C1' A A 488 -51.199 56.649 77.246 1.00 20.92 C
ATOM 14 N9 A A 488 -50.302 57.732 77.657 1.00 22.13 N
ATOM 15 C8 A A 488 -50.026 58.900 76.991 1.00 22.40 C
ATOM 16 N7 A A 488 -49.098 59.625 77.562 1.00 21.70 N
ATOM 17 C5 A A 488 -48.757 58.896 78.690 1.00 21.72 C
ATOM 18 C6 A A 488 -47.816 59.114 79.701 1.00 21.21 C
ATOM 19 N6 A A 488 -46.984 60.156 79.727 1.00 22.74 N
ATOM 20 N1 A A 488 -47.744 58.208 80.697 1.00 21.34 N
ATOM 21 C2 A A 488 -48.555 57.152 80.654 1.00 22.18 C
ATOM 22 N3 A A 488 -49.462 56.825 79.747 1.00 22.34 N
ATOM 23 C4 A A 488 -49.514 57.748 78.778 1.00 22.15 C
ATOM 24 P C A 489 -54.813 57.937 74.086 1.00 85.26 P
ATOM 25 OP1 C A 489 -55.012 57.010 72.947 1.00 46.31 O
ATOM 26 OP2 C A 489 -54.030 59.179 73.889 1.00 46.89 O
ATOM 27 O5' C A 489 -56.255 58.268 74.656 1.00 37.32 O
TER
ATOM 1 O3' G B 519 -59.230 49.084 78.063 1.00 27.89 O
ATOM 2 P G B 520 -57.757 48.435 78.015 1.00 28.70 P
ATOM 3 OP1 G B 520 -57.709 47.516 76.849 1.00 43.92 O
ATOM 4 OP2 G B 520 -57.408 47.918 79.360 1.00 42.35 O
ATOM 5 O5' G B 520 -56.815 49.676 77.712 1.00 8.84 O
ATOM 6 C5' G B 520 -56.883 50.357 76.451 1.00 6.76 C
ATOM 7 C4' G B 520 -55.849 51.455 76.395 1.00 4.70 C
ATOM 8 O4' G B 520 -56.116 52.415 77.453 1.00 4.42 O
ATOM 9 C3' G B 520 -54.418 51.006 76.631 1.00 3.56 C
ATOM 10 O3' G B 520 -53.793 50.586 75.434 1.00 2.84 O
ATOM 11 C2' G B 520 -53.749 52.259 77.177 1.00 4.23 C
ATOM 12 O2' G B 520 -53.340 53.110 76.138 1.00 4.71 O
ATOM 13 C1' G B 520 -54.887 52.924 77.957 1.00 4.09 C
ATOM 14 N9 G B 520 -54.808 52.659 79.393 1.00 26.59 N
ATOM 15 C8 G B 520 -55.606 51.823 80.142 1.00 26.74 C
ATOM 16 N7 G B 520 -55.253 51.764 81.397 1.00 26.40 N
ATOM 17 C5 G B 520 -54.164 52.619 81.486 1.00 27.57 C
ATOM 18 C6 G B 520 -53.350 52.952 82.593 1.00 28.58 C
ATOM 19 O6 G B 520 -53.424 52.539 83.753 1.00 30.37 O
ATOM 20 N1 G B 520 -52.357 53.859 82.241 1.00 28.63 N
ATOM 21 C2 G B 520 -52.167 54.374 80.987 1.00 28.70 C
ATOM 22 N2 G B 520 -51.164 55.233 80.856 1.00 29.69 N
ATOM 23 N3 G B 520 -52.911 54.066 79.941 1.00 28.58 N
ATOM 24 C4 G B 520 -53.885 53.189 80.260 1.00 27.59 C
ATOM 25 P C B 521 -52.404 49.794 75.516 1.00 39.65 P
ATOM 26 OP1 C B 521 -51.965 49.431 74.143 1.00 40.20 O
ATOM 27 OP2 C B 521 -52.535 48.735 76.549 1.00 40.43 O
ATOM 28 O5' C B 521 -51.388 50.885 76.059 1.00 11.80 O
TER
ATOM 2 P A A 488 -49.618 58.499 72.709 1.00 46.02 P
ATOM 3 OP1 A A 488 -49.001 57.333 72.026 1.00 43.95 O
ATOM 4 OP2 A A 488 -50.407 59.477 71.912 1.00 41.88 O
ATOM 5 O5' A A 488 -50.561 58.006 73.895 1.00 15.66 O
ATOM 6 C5' A A 488 -51.388 56.857 73.715 1.00 17.91 C
ATOM 7 C4' A A 488 -51.909 56.389 75.032 1.00 19.46 C
ATOM 8 O4' A A 488 -50.805 56.235 75.951 1.00 20.00 O
ATOM 9 C3' A A 488 -52.850 57.362 75.705 1.00 20.28 C
ATOM 10 O3' A A 488 -54.168 57.083 75.273 1.00 21.97 O
ATOM 11 C2' A A 488 -52.681 57.016 77.180 1.00 20.71 C
ATOM 12 O2' A A 488 -53.422 55.860 77.542 1.00 21.51 O
ATOM 13 C1' A A 488 -51.199 56.649 77.246 1.00 20.92 C
ATOM 14 N9 A A 488 -50.302 57.732 77.657 1.00 22.13 N
ATOM 15 C8 A A 488 -50.026 58.900 76.991 1.00 22.40 C
ATOM 16 N7 A A 488 -49.098 59.625 77.562 1.00 21.70 N
ATOM 17 C5 A A 488 -48.757 58.896 78.690 1.00 21.72 C
ATOM 18 C6 A A 488 -47.816 59.114 79.701 1.00 21.21 C
ATOM 19 N6 A A 488 -46.984 60.156 79.727 1.00 22.74 N
ATOM 20 N1 A A 488 -47.744 58.208 80.697 1.00 21.34 N
ATOM 21 C2 A A 488 -48.555 57.152 80.654 1.00 22.18 C
ATOM 22 N3 A A 488 -49.462 56.825 79.747 1.00 22.34 N
ATOM 23 C4 A A 488 -49.514 57.748 78.778 1.00 22.15 C
ATOM 24 P C A 489 -54.813 57.937 74.086 1.00 85.26 P
ATOM 25 OP1 C A 489 -55.012 57.010 72.947 1.00 46.31 O
ATOM 26 OP2 C A 489 -54.030 59.179 73.889 1.00 46.89 O
ATOM 27 O5' C A 489 -56.255 58.268 74.656 1.00 37.32 O
TER
ATOM 1 O3' G B 519 -59.230 49.084 78.063 1.00 27.89 O
ATOM 2 P G B 520 -57.757 48.435 78.015 1.00 28.70 P
ATOM 3 OP1 G B 520 -57.709 47.516 76.849 1.00 43.92 O
ATOM 4 OP2 G B 520 -57.408 47.918 79.360 1.00 42.35 O
ATOM 5 O5' G B 520 -56.815 49.676 77.712 1.00 8.84 O
ATOM 6 C5' G B 520 -56.883 50.357 76.451 1.00 6.76 C
ATOM 7 C4' G B 520 -55.849 51.455 76.395 1.00 4.70 C
ATOM 8 O4' G B 520 -56.116 52.415 77.453 1.00 4.42 O
ATOM 9 C3' G B 520 -54.418 51.006 76.631 1.00 3.56 C
ATOM 10 O3' G B 520 -53.793 50.586 75.434 1.00 2.84 O
ATOM 11 C2' G B 520 -53.749 52.259 77.177 1.00 4.23 C
ATOM 12 O2' G B 520 -53.340 53.110 76.138 1.00 4.71 O
ATOM 13 C1' G B 520 -54.887 52.924 77.957 1.00 4.09 C
ATOM 14 N9 G B 520 -54.808 52.659 79.393 1.00 26.59 N
ATOM 15 C8 G B 520 -55.606 51.823 80.142 1.00 26.74 C
ATOM 16 N7 G B 520 -55.253 51.764 81.397 1.00 26.40 N
ATOM 17 C5 G B 520 -54.164 52.619 81.486 1.00 27.57 C
ATOM 18 C6 G B 520 -53.350 52.952 82.593 1.00 28.58 C
ATOM 19 O6 G B 520 -53.424 52.539 83.753 1.00 30.37 O
ATOM 20 N1 G B 520 -52.357 53.859 82.241 1.00 28.63 N
ATOM 21 C2 G B 520 -52.167 54.374 80.987 1.00 28.70 C
ATOM 22 N2 G B 520 -51.164 55.233 80.856 1.00 29.69 N
ATOM 23 N3 G B 520 -52.911 54.066 79.941 1.00 28.58 N
ATOM 24 C4 G B 520 -53.885 53.189 80.260 1.00 27.59 C
ATOM 25 P C B 521 -52.404 49.794 75.516 1.00 39.65 P
ATOM 26 OP1 C B 521 -51.965 49.431 74.143 1.00 40.20 O
ATOM 27 OP2 C B 521 -52.535 48.735 76.549 1.00 40.43 O
ATOM 28 O5' C B 521 -51.388 50.885 76.059 1.00 11.80 O
TER
Atoms:
OP1: (-49.001,57.333,72.026)
OP2: (-50.407,59.477,71.912)
C3': (-52.850,57.362,75.705)
C1': (-51.199,56.649,77.246)
C5': (-51.388,56.857,73.715)
O4': (-50.805,56.235,75.951)
C8: (-50.026,58.900,76.991)
O2': (-53.422,55.860,77.542)
C6: (-47.816,59.114,79.701)
C5: (-48.757,58.896,78.690)
C4: (-49.514,57.748,78.778)
P: (-49.618,58.499,72.709)
C4': (-51.909,56.389,75.032)
C2': (-52.681,57.016,77.180)
C2: (-48.555,57.152,80.654)
N1: (-47.744,58.208,80.697)
N3: (-49.462,56.825,79.747)
N6: (-46.984,60.156,79.727)
N7: (-49.098,59.625,77.562)
N9: (-50.302,57.732,77.657)
O5': (-50.561,58.006,73.895)
O3': (-54.168,57.083,75.273)
OP2: (-50.407,59.477,71.912)
C3': (-52.850,57.362,75.705)
C1': (-51.199,56.649,77.246)
C5': (-51.388,56.857,73.715)
O4': (-50.805,56.235,75.951)
C8: (-50.026,58.900,76.991)
O2': (-53.422,55.860,77.542)
C6: (-47.816,59.114,79.701)
C5: (-48.757,58.896,78.690)
C4: (-49.514,57.748,78.778)
P: (-49.618,58.499,72.709)
C4': (-51.909,56.389,75.032)
C2': (-52.681,57.016,77.180)
C2: (-48.555,57.152,80.654)
N1: (-47.744,58.208,80.697)
N3: (-49.462,56.825,79.747)
N6: (-46.984,60.156,79.727)
N7: (-49.098,59.625,77.562)
N9: (-50.302,57.732,77.657)
O5': (-50.561,58.006,73.895)
O3': (-54.168,57.083,75.273)
OP1: (-57.709,47.516,76.849)
OP2: (-57.408,47.918,79.360)
C3': (-54.418,51.006,76.631)
C1': (-54.887,52.924,77.957)
C5': (-56.883,50.357,76.451)
O6: (-53.424,52.539,83.753)
O4': (-56.116,52.415,77.453)
C8: (-55.606,51.823,80.142)
C2: (-52.167,54.374,80.987)
C6: (-53.350,52.952,82.593)
C5: (-54.164,52.619,81.486)
C4: (-53.885,53.189,80.260)
P: (-57.757,48.435,78.015)
C4': (-55.849,51.455,76.395)
C2': (-53.749,52.259,77.177)
O2': (-53.340,53.110,76.138)
N1: (-52.357,53.859,82.241)
N2: (-51.164,55.233,80.856)
N3: (-52.911,54.066,79.941)
N7: (-55.253,51.764,81.397)
N9: (-54.808,52.659,79.393)
O5': (-56.815,49.676,77.712)
O3': (-53.793,50.586,75.434)
OP2: (-57.408,47.918,79.360)
C3': (-54.418,51.006,76.631)
C1': (-54.887,52.924,77.957)
C5': (-56.883,50.357,76.451)
O6: (-53.424,52.539,83.753)
O4': (-56.116,52.415,77.453)
C8: (-55.606,51.823,80.142)
C2: (-52.167,54.374,80.987)
C6: (-53.350,52.952,82.593)
C5: (-54.164,52.619,81.486)
C4: (-53.885,53.189,80.260)
P: (-57.757,48.435,78.015)
C4': (-55.849,51.455,76.395)
C2': (-53.749,52.259,77.177)
O2': (-53.340,53.110,76.138)
N1: (-52.357,53.859,82.241)
N2: (-51.164,55.233,80.856)
N3: (-52.911,54.066,79.941)
N7: (-55.253,51.764,81.397)
N9: (-54.808,52.659,79.393)
O5': (-56.815,49.676,77.712)
O3': (-53.793,50.586,75.434)
Image (generated by PyMOL):