Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A653:A197
Extra
PDB:
ATOM 1 O3' U A 652 40.660 97.664 34.891 1.00 48.29 O
ATOM 2 P A A 653 41.170 99.054 34.251 1.00 47.49 P
ATOM 3 OP1 A A 653 40.928 100.184 35.192 1.00 44.75 O
ATOM 4 OP2 A A 653 40.669 99.145 32.853 1.00 45.74 O
ATOM 5 O5' A A 653 42.741 98.845 34.156 1.00 47.97 O
ATOM 6 C5' A A 653 43.554 98.929 35.327 1.00 49.07 C
ATOM 7 C4' A A 653 45.006 99.047 34.943 1.00 49.20 C
ATOM 8 O4' A A 653 45.536 97.789 34.461 1.00 50.71 O
ATOM 9 C3' A A 653 45.364 100.057 33.868 1.00 48.16 C
ATOM 10 O3' A A 653 45.467 101.331 34.478 1.00 45.35 O
ATOM 11 C2' A A 653 46.746 99.576 33.459 1.00 49.45 C
ATOM 12 O2' A A 653 47.661 100.004 34.437 1.00 50.62 O
ATOM 13 C1' A A 653 46.601 98.049 33.567 1.00 51.07 C
ATOM 14 N9 A A 653 46.301 97.379 32.303 1.00 52.67 N
ATOM 15 C8 A A 653 45.087 96.897 31.858 1.00 53.09 C
ATOM 16 N7 A A 653 45.134 96.368 30.657 1.00 54.17 N
ATOM 17 C5 A A 653 46.468 96.499 30.290 1.00 53.27 C
ATOM 18 C6 A A 653 47.167 96.139 29.127 1.00 52.35 C
ATOM 19 N6 A A 653 46.602 95.554 28.077 1.00 50.54 N
ATOM 20 N1 A A 653 48.490 96.414 29.079 1.00 52.90 N
ATOM 21 C2 A A 653 49.064 97.012 30.132 1.00 53.00 C
ATOM 22 N3 A A 653 48.516 97.398 31.280 1.00 52.96 N
ATOM 23 C4 A A 653 47.199 97.114 31.297 1.00 53.05 C
ATOM 24 P A A 654 44.794 102.596 33.785 1.00 45.65 P
ATOM 25 OP1 A A 654 44.704 103.694 34.795 1.00 43.78 O
ATOM 26 OP2 A A 654 43.556 102.075 33.158 1.00 42.65 O
ATOM 27 O5' A A 654 45.884 103.039 32.703 1.00 44.43 O
TER
ATOM 1 O3' C B 196 53.232 104.916 34.292 1.00 44.38 O
ATOM 2 P G B 197 53.542 103.724 35.326 1.00 44.81 P
ATOM 3 OP1 G B 197 52.927 104.050 36.635 1.00 43.43 O
ATOM 4 OP2 G B 197 54.999 103.423 35.256 1.00 42.49 O
ATOM 5 O5' G B 197 52.734 102.490 34.713 1.00 46.50 O
ATOM 6 C5' G B 197 51.291 102.482 34.712 1.00 46.09 C
ATOM 7 C4' G B 197 50.773 101.197 34.120 1.00 46.25 C
ATOM 8 O4' G B 197 51.176 101.120 32.727 1.00 46.57 O
ATOM 9 C3' G B 197 51.350 99.936 34.733 1.00 45.91 C
ATOM 10 O3' G B 197 50.699 99.542 35.928 1.00 45.16 O
ATOM 11 C2' G B 197 51.145 98.918 33.627 1.00 45.80 C
ATOM 12 O2' G B 197 49.813 98.443 33.588 1.00 44.76 O
ATOM 13 C1' G B 197 51.447 99.768 32.388 1.00 46.32 C
ATOM 14 N9 G B 197 52.848 99.649 31.983 1.00 47.00 N
ATOM 15 C8 G B 197 53.894 100.491 32.281 1.00 45.93 C
ATOM 16 N7 G B 197 55.036 100.076 31.802 1.00 45.87 N
ATOM 17 C5 G B 197 54.723 98.898 31.141 1.00 46.06 C
ATOM 18 C6 G B 197 55.545 97.992 30.428 1.00 46.53 C
ATOM 19 O6 G B 197 56.756 98.042 30.218 1.00 46.28 O
ATOM 20 N1 G B 197 54.814 96.928 29.931 1.00 48.02 N
ATOM 21 C2 G B 197 53.466 96.754 30.085 1.00 48.53 C
ATOM 22 N2 G B 197 52.951 95.660 29.535 1.00 48.77 N
ATOM 23 N3 G B 197 52.687 97.587 30.731 1.00 47.94 N
ATOM 24 C4 G B 197 53.377 98.628 31.236 1.00 47.01 C
ATOM 25 P U B 198 51.548 98.809 37.073 1.00 46.00 P
ATOM 26 OP1 U B 198 50.607 98.512 38.164 1.00 45.11 O
ATOM 27 OP2 U B 198 52.755 99.630 37.332 1.00 45.90 O
ATOM 28 O5' U B 198 52.045 97.442 36.420 1.00 46.41 O
TER
ATOM 2 P A A 653 41.170 99.054 34.251 1.00 47.49 P
ATOM 3 OP1 A A 653 40.928 100.184 35.192 1.00 44.75 O
ATOM 4 OP2 A A 653 40.669 99.145 32.853 1.00 45.74 O
ATOM 5 O5' A A 653 42.741 98.845 34.156 1.00 47.97 O
ATOM 6 C5' A A 653 43.554 98.929 35.327 1.00 49.07 C
ATOM 7 C4' A A 653 45.006 99.047 34.943 1.00 49.20 C
ATOM 8 O4' A A 653 45.536 97.789 34.461 1.00 50.71 O
ATOM 9 C3' A A 653 45.364 100.057 33.868 1.00 48.16 C
ATOM 10 O3' A A 653 45.467 101.331 34.478 1.00 45.35 O
ATOM 11 C2' A A 653 46.746 99.576 33.459 1.00 49.45 C
ATOM 12 O2' A A 653 47.661 100.004 34.437 1.00 50.62 O
ATOM 13 C1' A A 653 46.601 98.049 33.567 1.00 51.07 C
ATOM 14 N9 A A 653 46.301 97.379 32.303 1.00 52.67 N
ATOM 15 C8 A A 653 45.087 96.897 31.858 1.00 53.09 C
ATOM 16 N7 A A 653 45.134 96.368 30.657 1.00 54.17 N
ATOM 17 C5 A A 653 46.468 96.499 30.290 1.00 53.27 C
ATOM 18 C6 A A 653 47.167 96.139 29.127 1.00 52.35 C
ATOM 19 N6 A A 653 46.602 95.554 28.077 1.00 50.54 N
ATOM 20 N1 A A 653 48.490 96.414 29.079 1.00 52.90 N
ATOM 21 C2 A A 653 49.064 97.012 30.132 1.00 53.00 C
ATOM 22 N3 A A 653 48.516 97.398 31.280 1.00 52.96 N
ATOM 23 C4 A A 653 47.199 97.114 31.297 1.00 53.05 C
ATOM 24 P A A 654 44.794 102.596 33.785 1.00 45.65 P
ATOM 25 OP1 A A 654 44.704 103.694 34.795 1.00 43.78 O
ATOM 26 OP2 A A 654 43.556 102.075 33.158 1.00 42.65 O
ATOM 27 O5' A A 654 45.884 103.039 32.703 1.00 44.43 O
TER
ATOM 1 O3' C B 196 53.232 104.916 34.292 1.00 44.38 O
ATOM 2 P G B 197 53.542 103.724 35.326 1.00 44.81 P
ATOM 3 OP1 G B 197 52.927 104.050 36.635 1.00 43.43 O
ATOM 4 OP2 G B 197 54.999 103.423 35.256 1.00 42.49 O
ATOM 5 O5' G B 197 52.734 102.490 34.713 1.00 46.50 O
ATOM 6 C5' G B 197 51.291 102.482 34.712 1.00 46.09 C
ATOM 7 C4' G B 197 50.773 101.197 34.120 1.00 46.25 C
ATOM 8 O4' G B 197 51.176 101.120 32.727 1.00 46.57 O
ATOM 9 C3' G B 197 51.350 99.936 34.733 1.00 45.91 C
ATOM 10 O3' G B 197 50.699 99.542 35.928 1.00 45.16 O
ATOM 11 C2' G B 197 51.145 98.918 33.627 1.00 45.80 C
ATOM 12 O2' G B 197 49.813 98.443 33.588 1.00 44.76 O
ATOM 13 C1' G B 197 51.447 99.768 32.388 1.00 46.32 C
ATOM 14 N9 G B 197 52.848 99.649 31.983 1.00 47.00 N
ATOM 15 C8 G B 197 53.894 100.491 32.281 1.00 45.93 C
ATOM 16 N7 G B 197 55.036 100.076 31.802 1.00 45.87 N
ATOM 17 C5 G B 197 54.723 98.898 31.141 1.00 46.06 C
ATOM 18 C6 G B 197 55.545 97.992 30.428 1.00 46.53 C
ATOM 19 O6 G B 197 56.756 98.042 30.218 1.00 46.28 O
ATOM 20 N1 G B 197 54.814 96.928 29.931 1.00 48.02 N
ATOM 21 C2 G B 197 53.466 96.754 30.085 1.00 48.53 C
ATOM 22 N2 G B 197 52.951 95.660 29.535 1.00 48.77 N
ATOM 23 N3 G B 197 52.687 97.587 30.731 1.00 47.94 N
ATOM 24 C4 G B 197 53.377 98.628 31.236 1.00 47.01 C
ATOM 25 P U B 198 51.548 98.809 37.073 1.00 46.00 P
ATOM 26 OP1 U B 198 50.607 98.512 38.164 1.00 45.11 O
ATOM 27 OP2 U B 198 52.755 99.630 37.332 1.00 45.90 O
ATOM 28 O5' U B 198 52.045 97.442 36.420 1.00 46.41 O
TER
Atoms:
OP1: (40.928,100.184,35.192)
OP2: (40.669,99.145,32.853)
C3': (45.364,100.057,33.868)
C1': (46.601,98.049,33.567)
C5': (43.554,98.929,35.327)
O4': (45.536,97.789,34.461)
C8: (45.087,96.897,31.858)
O2': (47.661,100.004,34.437)
C6: (47.167,96.139,29.127)
C5: (46.468,96.499,30.290)
C4: (47.199,97.114,31.297)
P: (41.170,99.054,34.251)
C4': (45.006,99.047,34.943)
C2': (46.746,99.576,33.459)
C2: (49.064,97.012,30.132)
N1: (48.490,96.414,29.079)
N3: (48.516,97.398,31.280)
N6: (46.602,95.554,28.077)
N7: (45.134,96.368,30.657)
N9: (46.301,97.379,32.303)
O5': (42.741,98.845,34.156)
O3': (45.467,101.331,34.478)
OP2: (40.669,99.145,32.853)
C3': (45.364,100.057,33.868)
C1': (46.601,98.049,33.567)
C5': (43.554,98.929,35.327)
O4': (45.536,97.789,34.461)
C8: (45.087,96.897,31.858)
O2': (47.661,100.004,34.437)
C6: (47.167,96.139,29.127)
C5: (46.468,96.499,30.290)
C4: (47.199,97.114,31.297)
P: (41.170,99.054,34.251)
C4': (45.006,99.047,34.943)
C2': (46.746,99.576,33.459)
C2: (49.064,97.012,30.132)
N1: (48.490,96.414,29.079)
N3: (48.516,97.398,31.280)
N6: (46.602,95.554,28.077)
N7: (45.134,96.368,30.657)
N9: (46.301,97.379,32.303)
O5': (42.741,98.845,34.156)
O3': (45.467,101.331,34.478)
OP1: (52.927,104.050,36.635)
OP2: (54.999,103.423,35.256)
C3': (51.350,99.936,34.733)
C1': (51.447,99.768,32.388)
C5': (51.291,102.482,34.712)
O6: (56.756,98.042,30.218)
O4': (51.176,101.120,32.727)
C8: (53.894,100.491,32.281)
C2: (53.466,96.754,30.085)
C6: (55.545,97.992,30.428)
C5: (54.723,98.898,31.141)
C4: (53.377,98.628,31.236)
P: (53.542,103.724,35.326)
C4': (50.773,101.197,34.120)
C2': (51.145,98.918,33.627)
O2': (49.813,98.443,33.588)
N1: (54.814,96.928,29.931)
N2: (52.951,95.660,29.535)
N3: (52.687,97.587,30.731)
N7: (55.036,100.076,31.802)
N9: (52.848,99.649,31.983)
O5': (52.734,102.490,34.713)
O3': (50.699,99.542,35.928)
OP2: (54.999,103.423,35.256)
C3': (51.350,99.936,34.733)
C1': (51.447,99.768,32.388)
C5': (51.291,102.482,34.712)
O6: (56.756,98.042,30.218)
O4': (51.176,101.120,32.727)
C8: (53.894,100.491,32.281)
C2: (53.466,96.754,30.085)
C6: (55.545,97.992,30.428)
C5: (54.723,98.898,31.141)
C4: (53.377,98.628,31.236)
P: (53.542,103.724,35.326)
C4': (50.773,101.197,34.120)
C2': (51.145,98.918,33.627)
O2': (49.813,98.443,33.588)
N1: (54.814,96.928,29.931)
N2: (52.951,95.660,29.535)
N3: (52.687,97.587,30.731)
N7: (55.036,100.076,31.802)
N9: (52.848,99.649,31.983)
O5': (52.734,102.490,34.713)
O3': (50.699,99.542,35.928)
Image (generated by PyMOL):