Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X19:X23
Extra
PDB:
ATOM 1 O3' G A 18 3.331 -13.477 50.118 1.00 46.49 O
ATOM 2 P A A 19 4.280 -12.658 51.106 1.00 46.10 P
ATOM 3 OP1 A A 19 4.520 -13.486 52.311 1.00 46.21 O
ATOM 4 OP2 A A 19 3.728 -11.293 51.258 1.00 46.25 O
ATOM 5 O5' A A 19 5.636 -12.558 50.265 1.00 45.66 O
ATOM 6 C5' A A 19 6.461 -13.701 50.055 1.00 45.06 C
ATOM 7 C4' A A 19 7.733 -13.301 49.332 1.00 44.61 C
ATOM 8 O4' A A 19 7.394 -12.702 48.057 1.00 44.56 O
ATOM 9 C3' A A 19 8.568 -12.237 50.027 1.00 44.23 C
ATOM 10 O3' A A 19 9.408 -12.816 51.015 1.00 43.81 O
ATOM 11 C2' A A 19 9.357 -11.652 48.863 1.00 44.28 C
ATOM 12 O2' A A 19 10.480 -12.432 48.502 1.00 44.40 O
ATOM 13 C1' A A 19 8.327 -11.684 47.738 1.00 44.34 C
ATOM 14 N9 A A 19 7.624 -10.415 47.534 1.00 44.28 N
ATOM 15 C8 A A 19 6.315 -10.137 47.823 1.00 44.30 C
ATOM 16 N7 A A 19 5.948 -8.911 47.532 1.00 44.22 N
ATOM 17 C5 A A 19 7.098 -8.340 47.013 1.00 44.35 C
ATOM 18 C6 A A 19 7.378 -7.049 46.511 1.00 44.43 C
ATOM 19 N6 A A 19 6.469 -6.071 46.457 1.00 44.46 N
ATOM 20 N1 A A 19 8.630 -6.797 46.069 1.00 44.29 N
ATOM 21 C2 A A 19 9.541 -7.779 46.127 1.00 44.23 C
ATOM 22 N3 A A 19 9.399 -9.029 46.572 1.00 44.12 N
ATOM 23 C4 A A 19 8.142 -9.251 47.006 1.00 44.24 C
ATOM 24 P U A 20 9.616 -12.072 52.419 1.00 43.52 P
ATOM 25 OP1 U A 20 10.246 -13.035 53.350 1.00 43.75 O
ATOM 26 OP2 U A 20 8.350 -11.407 52.800 1.00 43.38 O
ATOM 27 O5' U A 20 10.689 -10.943 52.069 1.00 43.81 O
TER
ATOM 1 O3' U B 22 18.259 -14.330 47.716 1.00 47.07 O
ATOM 2 P G B 23 17.570 -14.432 46.268 1.00 47.63 P
ATOM 3 OP1 G B 23 17.649 -15.855 45.875 1.00 48.08 O
ATOM 4 OP2 G B 23 18.120 -13.393 45.365 1.00 47.42 O
ATOM 5 O5' G B 23 16.032 -14.117 46.552 1.00 47.41 O
ATOM 6 C5' G B 23 15.677 -12.772 46.701 1.00 47.26 C
ATOM 7 C4' G B 23 14.198 -12.537 46.877 1.00 47.07 C
ATOM 8 O4' G B 23 14.095 -11.471 47.857 1.00 46.94 O
ATOM 9 C3' G B 23 13.526 -12.024 45.607 1.00 46.93 C
ATOM 10 O3' G B 23 12.643 -13.009 45.064 1.00 46.87 O
ATOM 11 C2' G B 23 12.794 -10.762 46.072 1.00 47.05 C
ATOM 12 O2' G B 23 11.484 -11.024 46.533 1.00 46.92 O
ATOM 13 C1' G B 23 13.653 -10.278 47.232 1.00 47.30 C
ATOM 14 N9 G B 23 14.769 -9.401 46.836 1.00 47.31 N
ATOM 15 C8 G B 23 16.017 -9.765 46.377 1.00 47.27 C
ATOM 16 N7 G B 23 16.803 -8.769 46.093 1.00 47.33 N
ATOM 17 C5 G B 23 16.029 -7.655 46.377 1.00 47.32 C
ATOM 18 C6 G B 23 16.355 -6.282 46.267 1.00 47.31 C
ATOM 19 O6 G B 23 17.423 -5.785 45.883 1.00 47.28 O
ATOM 20 N1 G B 23 15.297 -5.461 46.656 1.00 47.35 N
ATOM 21 C2 G B 23 14.074 -5.917 47.098 1.00 47.39 C
ATOM 22 N2 G B 23 13.177 -4.975 47.428 1.00 47.40 N
ATOM 23 N3 G B 23 13.757 -7.205 47.208 1.00 47.21 N
ATOM 24 C4 G B 23 14.778 -8.021 46.834 1.00 47.19 C
ATOM 25 P G B 24 12.361 -13.146 43.486 1.00 46.71 P
ATOM 26 OP1 G B 24 11.216 -14.074 43.353 1.00 46.87 O
ATOM 27 OP2 G B 24 13.630 -13.451 42.791 1.00 46.41 O
ATOM 28 O5' G B 24 11.890 -11.688 43.032 1.00 46.78 O
TER
ATOM 2 P A A 19 4.280 -12.658 51.106 1.00 46.10 P
ATOM 3 OP1 A A 19 4.520 -13.486 52.311 1.00 46.21 O
ATOM 4 OP2 A A 19 3.728 -11.293 51.258 1.00 46.25 O
ATOM 5 O5' A A 19 5.636 -12.558 50.265 1.00 45.66 O
ATOM 6 C5' A A 19 6.461 -13.701 50.055 1.00 45.06 C
ATOM 7 C4' A A 19 7.733 -13.301 49.332 1.00 44.61 C
ATOM 8 O4' A A 19 7.394 -12.702 48.057 1.00 44.56 O
ATOM 9 C3' A A 19 8.568 -12.237 50.027 1.00 44.23 C
ATOM 10 O3' A A 19 9.408 -12.816 51.015 1.00 43.81 O
ATOM 11 C2' A A 19 9.357 -11.652 48.863 1.00 44.28 C
ATOM 12 O2' A A 19 10.480 -12.432 48.502 1.00 44.40 O
ATOM 13 C1' A A 19 8.327 -11.684 47.738 1.00 44.34 C
ATOM 14 N9 A A 19 7.624 -10.415 47.534 1.00 44.28 N
ATOM 15 C8 A A 19 6.315 -10.137 47.823 1.00 44.30 C
ATOM 16 N7 A A 19 5.948 -8.911 47.532 1.00 44.22 N
ATOM 17 C5 A A 19 7.098 -8.340 47.013 1.00 44.35 C
ATOM 18 C6 A A 19 7.378 -7.049 46.511 1.00 44.43 C
ATOM 19 N6 A A 19 6.469 -6.071 46.457 1.00 44.46 N
ATOM 20 N1 A A 19 8.630 -6.797 46.069 1.00 44.29 N
ATOM 21 C2 A A 19 9.541 -7.779 46.127 1.00 44.23 C
ATOM 22 N3 A A 19 9.399 -9.029 46.572 1.00 44.12 N
ATOM 23 C4 A A 19 8.142 -9.251 47.006 1.00 44.24 C
ATOM 24 P U A 20 9.616 -12.072 52.419 1.00 43.52 P
ATOM 25 OP1 U A 20 10.246 -13.035 53.350 1.00 43.75 O
ATOM 26 OP2 U A 20 8.350 -11.407 52.800 1.00 43.38 O
ATOM 27 O5' U A 20 10.689 -10.943 52.069 1.00 43.81 O
TER
ATOM 1 O3' U B 22 18.259 -14.330 47.716 1.00 47.07 O
ATOM 2 P G B 23 17.570 -14.432 46.268 1.00 47.63 P
ATOM 3 OP1 G B 23 17.649 -15.855 45.875 1.00 48.08 O
ATOM 4 OP2 G B 23 18.120 -13.393 45.365 1.00 47.42 O
ATOM 5 O5' G B 23 16.032 -14.117 46.552 1.00 47.41 O
ATOM 6 C5' G B 23 15.677 -12.772 46.701 1.00 47.26 C
ATOM 7 C4' G B 23 14.198 -12.537 46.877 1.00 47.07 C
ATOM 8 O4' G B 23 14.095 -11.471 47.857 1.00 46.94 O
ATOM 9 C3' G B 23 13.526 -12.024 45.607 1.00 46.93 C
ATOM 10 O3' G B 23 12.643 -13.009 45.064 1.00 46.87 O
ATOM 11 C2' G B 23 12.794 -10.762 46.072 1.00 47.05 C
ATOM 12 O2' G B 23 11.484 -11.024 46.533 1.00 46.92 O
ATOM 13 C1' G B 23 13.653 -10.278 47.232 1.00 47.30 C
ATOM 14 N9 G B 23 14.769 -9.401 46.836 1.00 47.31 N
ATOM 15 C8 G B 23 16.017 -9.765 46.377 1.00 47.27 C
ATOM 16 N7 G B 23 16.803 -8.769 46.093 1.00 47.33 N
ATOM 17 C5 G B 23 16.029 -7.655 46.377 1.00 47.32 C
ATOM 18 C6 G B 23 16.355 -6.282 46.267 1.00 47.31 C
ATOM 19 O6 G B 23 17.423 -5.785 45.883 1.00 47.28 O
ATOM 20 N1 G B 23 15.297 -5.461 46.656 1.00 47.35 N
ATOM 21 C2 G B 23 14.074 -5.917 47.098 1.00 47.39 C
ATOM 22 N2 G B 23 13.177 -4.975 47.428 1.00 47.40 N
ATOM 23 N3 G B 23 13.757 -7.205 47.208 1.00 47.21 N
ATOM 24 C4 G B 23 14.778 -8.021 46.834 1.00 47.19 C
ATOM 25 P G B 24 12.361 -13.146 43.486 1.00 46.71 P
ATOM 26 OP1 G B 24 11.216 -14.074 43.353 1.00 46.87 O
ATOM 27 OP2 G B 24 13.630 -13.451 42.791 1.00 46.41 O
ATOM 28 O5' G B 24 11.890 -11.688 43.032 1.00 46.78 O
TER
Atoms:
OP1: (4.520,-13.486,52.311)
OP2: (3.728,-11.293,51.258)
C3': (8.568,-12.237,50.027)
C1': (8.327,-11.684,47.738)
C5': (6.461,-13.701,50.055)
O4': (7.394,-12.702,48.057)
C8: (6.315,-10.137,47.823)
O2': (10.480,-12.432,48.502)
C6: (7.378,-7.049,46.511)
C5: (7.098,-8.340,47.013)
C4: (8.142,-9.251,47.006)
P: (4.280,-12.658,51.106)
C4': (7.733,-13.301,49.332)
C2': (9.357,-11.652,48.863)
C2: (9.541,-7.779,46.127)
N1: (8.630,-6.797,46.069)
N3: (9.399,-9.029,46.572)
N6: (6.469,-6.071,46.457)
N7: (5.948,-8.911,47.532)
N9: (7.624,-10.415,47.534)
O5': (5.636,-12.558,50.265)
O3': (9.408,-12.816,51.015)
OP2: (3.728,-11.293,51.258)
C3': (8.568,-12.237,50.027)
C1': (8.327,-11.684,47.738)
C5': (6.461,-13.701,50.055)
O4': (7.394,-12.702,48.057)
C8: (6.315,-10.137,47.823)
O2': (10.480,-12.432,48.502)
C6: (7.378,-7.049,46.511)
C5: (7.098,-8.340,47.013)
C4: (8.142,-9.251,47.006)
P: (4.280,-12.658,51.106)
C4': (7.733,-13.301,49.332)
C2': (9.357,-11.652,48.863)
C2: (9.541,-7.779,46.127)
N1: (8.630,-6.797,46.069)
N3: (9.399,-9.029,46.572)
N6: (6.469,-6.071,46.457)
N7: (5.948,-8.911,47.532)
N9: (7.624,-10.415,47.534)
O5': (5.636,-12.558,50.265)
O3': (9.408,-12.816,51.015)
OP1: (17.649,-15.855,45.875)
OP2: (18.120,-13.393,45.365)
C3': (13.526,-12.024,45.607)
C1': (13.653,-10.278,47.232)
C5': (15.677,-12.772,46.701)
O6: (17.423,-5.785,45.883)
O4': (14.095,-11.471,47.857)
C8: (16.017,-9.765,46.377)
C2: (14.074,-5.917,47.098)
C6: (16.355,-6.282,46.267)
C5: (16.029,-7.655,46.377)
C4: (14.778,-8.021,46.834)
P: (17.570,-14.432,46.268)
C4': (14.198,-12.537,46.877)
C2': (12.794,-10.762,46.072)
O2': (11.484,-11.024,46.533)
N1: (15.297,-5.461,46.656)
N2: (13.177,-4.975,47.428)
N3: (13.757,-7.205,47.208)
N7: (16.803,-8.769,46.093)
N9: (14.769,-9.401,46.836)
O5': (16.032,-14.117,46.552)
O3': (12.643,-13.009,45.064)
OP2: (18.120,-13.393,45.365)
C3': (13.526,-12.024,45.607)
C1': (13.653,-10.278,47.232)
C5': (15.677,-12.772,46.701)
O6: (17.423,-5.785,45.883)
O4': (14.095,-11.471,47.857)
C8: (16.017,-9.765,46.377)
C2: (14.074,-5.917,47.098)
C6: (16.355,-6.282,46.267)
C5: (16.029,-7.655,46.377)
C4: (14.778,-8.021,46.834)
P: (17.570,-14.432,46.268)
C4': (14.198,-12.537,46.877)
C2': (12.794,-10.762,46.072)
O2': (11.484,-11.024,46.533)
N1: (15.297,-5.461,46.656)
N2: (13.177,-4.975,47.428)
N3: (13.757,-7.205,47.208)
N7: (16.803,-8.769,46.093)
N9: (14.769,-9.401,46.836)
O5': (16.032,-14.117,46.552)
O3': (12.643,-13.009,45.064)
Image (generated by PyMOL):