Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:B20:B23
Extra
PDB:
ATOM 1 O3' U A 19 9.730 -6.301 -22.788 1.00 32.79 O
ATOM 2 P A A 20 9.684 -7.858 -23.178 1.00 50.53 P
ATOM 3 OP1 A A 20 11.003 -8.434 -22.849 1.00 45.05 O
ATOM 4 OP2 A A 20 9.207 -7.941 -24.567 1.00 61.94 O
ATOM 5 O5' A A 20 8.578 -8.441 -22.190 1.00 73.79 O
ATOM 6 C5' A A 20 8.795 -9.663 -21.500 1.00 68.16 C
ATOM 7 C4' A A 20 8.127 -9.680 -20.147 1.00 58.91 C
ATOM 8 O4' A A 20 8.232 -8.383 -19.516 1.00 53.39 O
ATOM 9 C3' A A 20 6.638 -9.961 -20.136 1.00 58.96 C
ATOM 10 O3' A A 20 6.341 -11.334 -20.293 1.00 60.37 O
ATOM 11 C2' A A 20 6.213 -9.410 -18.781 1.00 58.04 C
ATOM 12 O2' A A 20 6.513 -10.342 -17.756 1.00 60.98 O
ATOM 13 C1' A A 20 7.147 -8.209 -18.626 1.00 53.95 C
ATOM 14 N9 A A 20 6.479 -6.930 -18.923 1.00 52.04 N
ATOM 15 C8 A A 20 6.713 -6.116 -19.996 1.00 46.82 C
ATOM 16 N7 A A 20 6.000 -5.020 -19.996 1.00 43.01 N
ATOM 17 C5 A A 20 5.252 -5.105 -18.837 1.00 52.15 C
ATOM 18 C6 A A 20 4.302 -4.230 -18.267 1.00 52.34 C
ATOM 19 N6 A A 20 3.948 -3.071 -18.850 1.00 42.37 N
ATOM 20 N1 A A 20 3.739 -4.599 -17.077 1.00 47.00 N
ATOM 21 C2 A A 20 4.112 -5.765 -16.533 1.00 37.67 C
ATOM 22 N3 A A 20 4.996 -6.659 -16.979 1.00 44.33 N
ATOM 23 C4 A A 20 5.544 -6.273 -18.150 1.00 51.93 C
ATOM 24 P A A 21 5.113 -11.789 -21.221 1.00 55.12 P
ATOM 25 OP1 A A 21 5.210 -13.265 -21.367 1.00 55.19 O
ATOM 26 OP2 A A 21 5.152 -10.949 -22.438 1.00 40.40 O
ATOM 27 O5' A A 21 3.825 -11.402 -20.348 1.00 61.96 O
TER
ATOM 1 O3' U B 22 2.482 -15.330 -13.723 1.00 76.65 O
ATOM 2 P G B 23 2.252 -14.111 -12.704 1.00 69.66 P
ATOM 3 OP1 G B 23 3.118 -14.364 -11.526 1.00 70.74 O
ATOM 4 OP2 G B 23 0.783 -13.972 -12.504 1.00 52.98 O
ATOM 5 O5' G B 23 2.802 -12.860 -13.513 1.00 65.51 O
ATOM 6 C5' G B 23 4.192 -12.655 -13.695 1.00 57.85 C
ATOM 7 C4' G B 23 4.462 -11.326 -14.347 1.00 52.22 C
ATOM 8 O4' G B 23 3.712 -11.223 -15.592 1.00 45.23 O
ATOM 9 C3' G B 23 4.025 -10.106 -13.556 1.00 47.62 C
ATOM 10 O3' G B 23 4.950 -9.740 -12.552 1.00 42.99 O
ATOM 11 C2' G B 23 3.851 -9.059 -14.643 1.00 47.88 C
ATOM 12 O2' G B 23 5.111 -8.586 -15.077 1.00 51.99 O
ATOM 13 C1' G B 23 3.242 -9.901 -15.762 1.00 43.52 C
ATOM 14 N9 G B 23 1.767 -9.907 -15.681 1.00 42.38 N
ATOM 15 C8 G B 23 0.898 -10.951 -15.432 1.00 43.91 C
ATOM 16 N7 G B 23 -0.363 -10.580 -15.393 1.00 41.30 N
ATOM 17 C5 G B 23 -0.313 -9.207 -15.613 1.00 39.69 C
ATOM 18 C6 G B 23 -1.346 -8.247 -15.689 1.00 34.99 C
ATOM 19 O6 G B 23 -2.559 -8.441 -15.571 1.00 40.25 O
ATOM 20 N1 G B 23 -0.852 -6.962 -15.940 1.00 27.29 N
ATOM 21 C2 G B 23 0.477 -6.633 -16.107 1.00 36.83 C
ATOM 22 N2 G B 23 0.786 -5.336 -16.339 1.00 20.84 N
ATOM 23 N3 G B 23 1.448 -7.531 -16.038 1.00 42.90 N
ATOM 24 C4 G B 23 0.986 -8.780 -15.794 1.00 42.35 C
ATOM 25 P G B 24 4.428 -9.234 -11.123 1.00 61.51 P
ATOM 26 OP1 G B 24 5.547 -9.391 -10.164 1.00 63.60 O
ATOM 27 OP2 G B 24 3.152 -9.933 -10.859 1.00 65.59 O
ATOM 28 O5' G B 24 4.158 -7.697 -11.378 1.00 37.73 O
TER
ATOM 2 P A A 20 9.684 -7.858 -23.178 1.00 50.53 P
ATOM 3 OP1 A A 20 11.003 -8.434 -22.849 1.00 45.05 O
ATOM 4 OP2 A A 20 9.207 -7.941 -24.567 1.00 61.94 O
ATOM 5 O5' A A 20 8.578 -8.441 -22.190 1.00 73.79 O
ATOM 6 C5' A A 20 8.795 -9.663 -21.500 1.00 68.16 C
ATOM 7 C4' A A 20 8.127 -9.680 -20.147 1.00 58.91 C
ATOM 8 O4' A A 20 8.232 -8.383 -19.516 1.00 53.39 O
ATOM 9 C3' A A 20 6.638 -9.961 -20.136 1.00 58.96 C
ATOM 10 O3' A A 20 6.341 -11.334 -20.293 1.00 60.37 O
ATOM 11 C2' A A 20 6.213 -9.410 -18.781 1.00 58.04 C
ATOM 12 O2' A A 20 6.513 -10.342 -17.756 1.00 60.98 O
ATOM 13 C1' A A 20 7.147 -8.209 -18.626 1.00 53.95 C
ATOM 14 N9 A A 20 6.479 -6.930 -18.923 1.00 52.04 N
ATOM 15 C8 A A 20 6.713 -6.116 -19.996 1.00 46.82 C
ATOM 16 N7 A A 20 6.000 -5.020 -19.996 1.00 43.01 N
ATOM 17 C5 A A 20 5.252 -5.105 -18.837 1.00 52.15 C
ATOM 18 C6 A A 20 4.302 -4.230 -18.267 1.00 52.34 C
ATOM 19 N6 A A 20 3.948 -3.071 -18.850 1.00 42.37 N
ATOM 20 N1 A A 20 3.739 -4.599 -17.077 1.00 47.00 N
ATOM 21 C2 A A 20 4.112 -5.765 -16.533 1.00 37.67 C
ATOM 22 N3 A A 20 4.996 -6.659 -16.979 1.00 44.33 N
ATOM 23 C4 A A 20 5.544 -6.273 -18.150 1.00 51.93 C
ATOM 24 P A A 21 5.113 -11.789 -21.221 1.00 55.12 P
ATOM 25 OP1 A A 21 5.210 -13.265 -21.367 1.00 55.19 O
ATOM 26 OP2 A A 21 5.152 -10.949 -22.438 1.00 40.40 O
ATOM 27 O5' A A 21 3.825 -11.402 -20.348 1.00 61.96 O
TER
ATOM 1 O3' U B 22 2.482 -15.330 -13.723 1.00 76.65 O
ATOM 2 P G B 23 2.252 -14.111 -12.704 1.00 69.66 P
ATOM 3 OP1 G B 23 3.118 -14.364 -11.526 1.00 70.74 O
ATOM 4 OP2 G B 23 0.783 -13.972 -12.504 1.00 52.98 O
ATOM 5 O5' G B 23 2.802 -12.860 -13.513 1.00 65.51 O
ATOM 6 C5' G B 23 4.192 -12.655 -13.695 1.00 57.85 C
ATOM 7 C4' G B 23 4.462 -11.326 -14.347 1.00 52.22 C
ATOM 8 O4' G B 23 3.712 -11.223 -15.592 1.00 45.23 O
ATOM 9 C3' G B 23 4.025 -10.106 -13.556 1.00 47.62 C
ATOM 10 O3' G B 23 4.950 -9.740 -12.552 1.00 42.99 O
ATOM 11 C2' G B 23 3.851 -9.059 -14.643 1.00 47.88 C
ATOM 12 O2' G B 23 5.111 -8.586 -15.077 1.00 51.99 O
ATOM 13 C1' G B 23 3.242 -9.901 -15.762 1.00 43.52 C
ATOM 14 N9 G B 23 1.767 -9.907 -15.681 1.00 42.38 N
ATOM 15 C8 G B 23 0.898 -10.951 -15.432 1.00 43.91 C
ATOM 16 N7 G B 23 -0.363 -10.580 -15.393 1.00 41.30 N
ATOM 17 C5 G B 23 -0.313 -9.207 -15.613 1.00 39.69 C
ATOM 18 C6 G B 23 -1.346 -8.247 -15.689 1.00 34.99 C
ATOM 19 O6 G B 23 -2.559 -8.441 -15.571 1.00 40.25 O
ATOM 20 N1 G B 23 -0.852 -6.962 -15.940 1.00 27.29 N
ATOM 21 C2 G B 23 0.477 -6.633 -16.107 1.00 36.83 C
ATOM 22 N2 G B 23 0.786 -5.336 -16.339 1.00 20.84 N
ATOM 23 N3 G B 23 1.448 -7.531 -16.038 1.00 42.90 N
ATOM 24 C4 G B 23 0.986 -8.780 -15.794 1.00 42.35 C
ATOM 25 P G B 24 4.428 -9.234 -11.123 1.00 61.51 P
ATOM 26 OP1 G B 24 5.547 -9.391 -10.164 1.00 63.60 O
ATOM 27 OP2 G B 24 3.152 -9.933 -10.859 1.00 65.59 O
ATOM 28 O5' G B 24 4.158 -7.697 -11.378 1.00 37.73 O
TER
Atoms:
OP1: (11.003,-8.434,-22.849)
OP2: (9.207,-7.941,-24.567)
C3': (6.638,-9.961,-20.136)
C1': (7.147,-8.209,-18.626)
C5': (8.795,-9.663,-21.500)
O4': (8.232,-8.383,-19.516)
C8: (6.713,-6.116,-19.996)
O2': (6.513,-10.342,-17.756)
C6: (4.302,-4.230,-18.267)
C5: (5.252,-5.105,-18.837)
C4: (5.544,-6.273,-18.150)
P: (9.684,-7.858,-23.178)
C4': (8.127,-9.680,-20.147)
C2': (6.213,-9.410,-18.781)
C2: (4.112,-5.765,-16.533)
N1: (3.739,-4.599,-17.077)
N3: (4.996,-6.659,-16.979)
N6: (3.948,-3.071,-18.850)
N7: (6.000,-5.020,-19.996)
N9: (6.479,-6.930,-18.923)
O5': (8.578,-8.441,-22.190)
O3': (6.341,-11.334,-20.293)
OP2: (9.207,-7.941,-24.567)
C3': (6.638,-9.961,-20.136)
C1': (7.147,-8.209,-18.626)
C5': (8.795,-9.663,-21.500)
O4': (8.232,-8.383,-19.516)
C8: (6.713,-6.116,-19.996)
O2': (6.513,-10.342,-17.756)
C6: (4.302,-4.230,-18.267)
C5: (5.252,-5.105,-18.837)
C4: (5.544,-6.273,-18.150)
P: (9.684,-7.858,-23.178)
C4': (8.127,-9.680,-20.147)
C2': (6.213,-9.410,-18.781)
C2: (4.112,-5.765,-16.533)
N1: (3.739,-4.599,-17.077)
N3: (4.996,-6.659,-16.979)
N6: (3.948,-3.071,-18.850)
N7: (6.000,-5.020,-19.996)
N9: (6.479,-6.930,-18.923)
O5': (8.578,-8.441,-22.190)
O3': (6.341,-11.334,-20.293)
OP1: (3.118,-14.364,-11.526)
OP2: (0.783,-13.972,-12.504)
C3': (4.025,-10.106,-13.556)
C1': (3.242,-9.901,-15.762)
C5': (4.192,-12.655,-13.695)
O6: (-2.559,-8.441,-15.571)
O4': (3.712,-11.223,-15.592)
C8: (0.898,-10.951,-15.432)
C2: (0.477,-6.633,-16.107)
C6: (-1.346,-8.247,-15.689)
C5: (-0.313,-9.207,-15.613)
C4: (0.986,-8.780,-15.794)
P: (2.252,-14.111,-12.704)
C4': (4.462,-11.326,-14.347)
C2': (3.851,-9.059,-14.643)
O2': (5.111,-8.586,-15.077)
N1: (-0.852,-6.962,-15.940)
N2: (0.786,-5.336,-16.339)
N3: (1.448,-7.531,-16.038)
N7: (-0.363,-10.580,-15.393)
N9: (1.767,-9.907,-15.681)
O5': (2.802,-12.860,-13.513)
O3': (4.950,-9.740,-12.552)
OP2: (0.783,-13.972,-12.504)
C3': (4.025,-10.106,-13.556)
C1': (3.242,-9.901,-15.762)
C5': (4.192,-12.655,-13.695)
O6: (-2.559,-8.441,-15.571)
O4': (3.712,-11.223,-15.592)
C8: (0.898,-10.951,-15.432)
C2: (0.477,-6.633,-16.107)
C6: (-1.346,-8.247,-15.689)
C5: (-0.313,-9.207,-15.613)
C4: (0.986,-8.780,-15.794)
P: (2.252,-14.111,-12.704)
C4': (4.462,-11.326,-14.347)
C2': (3.851,-9.059,-14.643)
O2': (5.111,-8.586,-15.077)
N1: (-0.852,-6.962,-15.940)
N2: (0.786,-5.336,-16.339)
N3: (1.448,-7.531,-16.038)
N7: (-0.363,-10.580,-15.393)
N9: (1.767,-9.907,-15.681)
O5': (2.802,-12.860,-13.513)
O3': (4.950,-9.740,-12.552)
Image (generated by PyMOL):