Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MMS:C54:C3
Extra
PDB:
ATOM 1 O3' C A 53 13.379 1.321 10.455 1.00 47.83 O
ATOM 2 P C A 54 13.943 0.357 11.610 1.00 45.15 P
ATOM 3 OP1 C A 54 14.345 1.217 12.749 1.00 50.66 O
ATOM 4 OP2 C A 54 14.937 -0.579 11.008 1.00 37.59 O
ATOM 5 O5' C A 54 12.669 -0.496 12.036 1.00 27.84 O
ATOM 6 C5' C A 54 11.541 0.141 12.636 1.00 26.44 C
ATOM 7 C4' C A 54 10.431 -0.855 12.852 1.00 36.80 C
ATOM 8 O4' C A 54 9.967 -1.354 11.569 1.00 46.02 O
ATOM 9 C3' C A 54 10.793 -2.111 13.623 1.00 39.57 C
ATOM 10 O3' C A 54 10.794 -1.905 15.026 1.00 48.60 O
ATOM 11 C2' C A 54 9.713 -3.084 13.169 1.00 42.79 C
ATOM 12 O2' C A 54 8.473 -2.848 13.811 1.00 36.52 O
ATOM 13 C1' C A 54 9.576 -2.714 11.693 1.00 39.01 C
ATOM 14 N1 C A 54 10.448 -3.539 10.827 1.00 31.92 N
ATOM 15 C2 C A 54 10.029 -4.832 10.461 1.00 29.04 C
ATOM 16 O2 C A 54 8.934 -5.259 10.875 1.00 27.41 O
ATOM 17 N3 C A 54 10.831 -5.584 9.672 1.00 26.50 N
ATOM 18 C4 C A 54 12.005 -5.100 9.255 1.00 26.95 C
ATOM 19 N4 C A 54 12.768 -5.879 8.473 1.00 32.01 N
ATOM 20 C5 C A 54 12.453 -3.798 9.614 1.00 31.44 C
ATOM 21 C6 C A 54 11.652 -3.059 10.389 1.00 27.18 C
ATOM 22 P A A 55 11.685 -2.860 15.964 1.00 49.11 P
ATOM 23 OP1 A A 55 11.676 -2.277 17.331 1.00 55.01 O
ATOM 24 OP2 A A 55 12.987 -3.106 15.282 1.00 36.36 O
ATOM 25 O5' A A 55 10.861 -4.222 15.988 1.00 33.45 O
TER
ATOM 1 O3' U B 2 9.295 -17.321 6.812 1.00 61.44 O
ATOM 2 P G B 3 8.426 -16.576 5.682 1.00 62.77 P
ATOM 3 OP1 G B 3 7.391 -17.524 5.177 1.00 63.46 O
ATOM 4 OP2 G B 3 9.391 -15.966 4.732 1.00 48.23 O
ATOM 5 O5' G B 3 7.673 -15.417 6.482 1.00 57.93 O
ATOM 6 C5' G B 3 6.589 -15.737 7.376 1.00 58.01 C
ATOM 7 C4' G B 3 6.160 -14.521 8.162 1.00 54.61 C
ATOM 8 O4' G B 3 7.279 -14.019 8.937 1.00 57.89 O
ATOM 9 C3' G B 3 5.693 -13.296 7.392 1.00 56.27 C
ATOM 10 O3' G B 3 4.352 -13.378 6.946 1.00 61.66 O
ATOM 11 C2' G B 3 5.851 -12.189 8.425 1.00 52.95 C
ATOM 12 O2' G B 3 4.779 -12.130 9.346 1.00 49.43 O
ATOM 13 C1' G B 3 7.119 -12.626 9.148 1.00 47.41 C
ATOM 14 N9 G B 3 8.274 -11.911 8.616 1.00 41.21 N
ATOM 15 C8 G B 3 9.205 -12.347 7.703 1.00 35.70 C
ATOM 16 N7 G B 3 10.100 -11.440 7.414 1.00 39.32 N
ATOM 17 C5 G B 3 9.741 -10.342 8.190 1.00 34.83 C
ATOM 18 C6 G B 3 10.333 -9.051 8.304 1.00 30.48 C
ATOM 19 O6 G B 3 11.333 -8.604 7.728 1.00 27.46 O
ATOM 20 N1 G B 3 9.635 -8.245 9.199 1.00 30.56 N
ATOM 21 C2 G B 3 8.511 -8.623 9.898 1.00 43.91 C
ATOM 22 N2 G B 3 7.967 -7.703 10.717 1.00 37.62 N
ATOM 23 N3 G B 3 7.957 -9.818 9.803 1.00 43.41 N
ATOM 24 C4 G B 3 8.619 -10.620 8.938 1.00 41.38 C
ATOM 25 P G B 4 3.878 -12.469 5.704 1.00 66.88 P
ATOM 26 OP1 G B 4 2.452 -12.820 5.440 1.00 64.70 O
ATOM 27 OP2 G B 4 4.889 -12.575 4.612 1.00 48.03 O
ATOM 28 O5' G B 4 3.943 -10.971 6.248 1.00 63.61 O
TER
ATOM 2 P C A 54 13.943 0.357 11.610 1.00 45.15 P
ATOM 3 OP1 C A 54 14.345 1.217 12.749 1.00 50.66 O
ATOM 4 OP2 C A 54 14.937 -0.579 11.008 1.00 37.59 O
ATOM 5 O5' C A 54 12.669 -0.496 12.036 1.00 27.84 O
ATOM 6 C5' C A 54 11.541 0.141 12.636 1.00 26.44 C
ATOM 7 C4' C A 54 10.431 -0.855 12.852 1.00 36.80 C
ATOM 8 O4' C A 54 9.967 -1.354 11.569 1.00 46.02 O
ATOM 9 C3' C A 54 10.793 -2.111 13.623 1.00 39.57 C
ATOM 10 O3' C A 54 10.794 -1.905 15.026 1.00 48.60 O
ATOM 11 C2' C A 54 9.713 -3.084 13.169 1.00 42.79 C
ATOM 12 O2' C A 54 8.473 -2.848 13.811 1.00 36.52 O
ATOM 13 C1' C A 54 9.576 -2.714 11.693 1.00 39.01 C
ATOM 14 N1 C A 54 10.448 -3.539 10.827 1.00 31.92 N
ATOM 15 C2 C A 54 10.029 -4.832 10.461 1.00 29.04 C
ATOM 16 O2 C A 54 8.934 -5.259 10.875 1.00 27.41 O
ATOM 17 N3 C A 54 10.831 -5.584 9.672 1.00 26.50 N
ATOM 18 C4 C A 54 12.005 -5.100 9.255 1.00 26.95 C
ATOM 19 N4 C A 54 12.768 -5.879 8.473 1.00 32.01 N
ATOM 20 C5 C A 54 12.453 -3.798 9.614 1.00 31.44 C
ATOM 21 C6 C A 54 11.652 -3.059 10.389 1.00 27.18 C
ATOM 22 P A A 55 11.685 -2.860 15.964 1.00 49.11 P
ATOM 23 OP1 A A 55 11.676 -2.277 17.331 1.00 55.01 O
ATOM 24 OP2 A A 55 12.987 -3.106 15.282 1.00 36.36 O
ATOM 25 O5' A A 55 10.861 -4.222 15.988 1.00 33.45 O
TER
ATOM 1 O3' U B 2 9.295 -17.321 6.812 1.00 61.44 O
ATOM 2 P G B 3 8.426 -16.576 5.682 1.00 62.77 P
ATOM 3 OP1 G B 3 7.391 -17.524 5.177 1.00 63.46 O
ATOM 4 OP2 G B 3 9.391 -15.966 4.732 1.00 48.23 O
ATOM 5 O5' G B 3 7.673 -15.417 6.482 1.00 57.93 O
ATOM 6 C5' G B 3 6.589 -15.737 7.376 1.00 58.01 C
ATOM 7 C4' G B 3 6.160 -14.521 8.162 1.00 54.61 C
ATOM 8 O4' G B 3 7.279 -14.019 8.937 1.00 57.89 O
ATOM 9 C3' G B 3 5.693 -13.296 7.392 1.00 56.27 C
ATOM 10 O3' G B 3 4.352 -13.378 6.946 1.00 61.66 O
ATOM 11 C2' G B 3 5.851 -12.189 8.425 1.00 52.95 C
ATOM 12 O2' G B 3 4.779 -12.130 9.346 1.00 49.43 O
ATOM 13 C1' G B 3 7.119 -12.626 9.148 1.00 47.41 C
ATOM 14 N9 G B 3 8.274 -11.911 8.616 1.00 41.21 N
ATOM 15 C8 G B 3 9.205 -12.347 7.703 1.00 35.70 C
ATOM 16 N7 G B 3 10.100 -11.440 7.414 1.00 39.32 N
ATOM 17 C5 G B 3 9.741 -10.342 8.190 1.00 34.83 C
ATOM 18 C6 G B 3 10.333 -9.051 8.304 1.00 30.48 C
ATOM 19 O6 G B 3 11.333 -8.604 7.728 1.00 27.46 O
ATOM 20 N1 G B 3 9.635 -8.245 9.199 1.00 30.56 N
ATOM 21 C2 G B 3 8.511 -8.623 9.898 1.00 43.91 C
ATOM 22 N2 G B 3 7.967 -7.703 10.717 1.00 37.62 N
ATOM 23 N3 G B 3 7.957 -9.818 9.803 1.00 43.41 N
ATOM 24 C4 G B 3 8.619 -10.620 8.938 1.00 41.38 C
ATOM 25 P G B 4 3.878 -12.469 5.704 1.00 66.88 P
ATOM 26 OP1 G B 4 2.452 -12.820 5.440 1.00 64.70 O
ATOM 27 OP2 G B 4 4.889 -12.575 4.612 1.00 48.03 O
ATOM 28 O5' G B 4 3.943 -10.971 6.248 1.00 63.61 O
TER
Atoms:
C2: (10.029,-4.832,10.461)
OP1: (14.345,1.217,12.749)
OP2: (14.937,-0.579,11.008)
C4: (12.005,-5.100,9.255)
O5': (12.669,-0.496,12.036)
C3': (10.793,-2.111,13.623)
C1': (9.576,-2.714,11.693)
O4': (9.967,-1.354,11.569)
C5': (11.541,0.141,12.636)
P: (13.943,0.357,11.610)
O2: (8.934,-5.259,10.875)
C4': (10.431,-0.855,12.852)
C2': (9.713,-3.084,13.169)
O2': (8.473,-2.848,13.811)
N1: (10.448,-3.539,10.827)
N3: (10.831,-5.584,9.672)
N4: (12.768,-5.879,8.473)
C6: (11.652,-3.059,10.389)
C5: (12.453,-3.798,9.614)
O3': (10.794,-1.905,15.026)
OP1: (14.345,1.217,12.749)
OP2: (14.937,-0.579,11.008)
C4: (12.005,-5.100,9.255)
O5': (12.669,-0.496,12.036)
C3': (10.793,-2.111,13.623)
C1': (9.576,-2.714,11.693)
O4': (9.967,-1.354,11.569)
C5': (11.541,0.141,12.636)
P: (13.943,0.357,11.610)
O2: (8.934,-5.259,10.875)
C4': (10.431,-0.855,12.852)
C2': (9.713,-3.084,13.169)
O2': (8.473,-2.848,13.811)
N1: (10.448,-3.539,10.827)
N3: (10.831,-5.584,9.672)
N4: (12.768,-5.879,8.473)
C6: (11.652,-3.059,10.389)
C5: (12.453,-3.798,9.614)
O3': (10.794,-1.905,15.026)
OP1: (7.391,-17.524,5.177)
OP2: (9.391,-15.966,4.732)
C3': (5.693,-13.296,7.392)
C1': (7.119,-12.626,9.148)
C5': (6.589,-15.737,7.376)
O6: (11.333,-8.604,7.728)
O4': (7.279,-14.019,8.937)
C8: (9.205,-12.347,7.703)
C2: (8.511,-8.623,9.898)
C6: (10.333,-9.051,8.304)
C5: (9.741,-10.342,8.190)
C4: (8.619,-10.620,8.938)
P: (8.426,-16.576,5.682)
C4': (6.160,-14.521,8.162)
C2': (5.851,-12.189,8.425)
O2': (4.779,-12.130,9.346)
N1: (9.635,-8.245,9.199)
N2: (7.967,-7.703,10.717)
N3: (7.957,-9.818,9.803)
N7: (10.100,-11.440,7.414)
N9: (8.274,-11.911,8.616)
O5': (7.673,-15.417,6.482)
O3': (4.352,-13.378,6.946)
OP2: (9.391,-15.966,4.732)
C3': (5.693,-13.296,7.392)
C1': (7.119,-12.626,9.148)
C5': (6.589,-15.737,7.376)
O6: (11.333,-8.604,7.728)
O4': (7.279,-14.019,8.937)
C8: (9.205,-12.347,7.703)
C2: (8.511,-8.623,9.898)
C6: (10.333,-9.051,8.304)
C5: (9.741,-10.342,8.190)
C4: (8.619,-10.620,8.938)
P: (8.426,-16.576,5.682)
C4': (6.160,-14.521,8.162)
C2': (5.851,-12.189,8.425)
O2': (4.779,-12.130,9.346)
N1: (9.635,-8.245,9.199)
N2: (7.967,-7.703,10.717)
N3: (7.957,-9.818,9.803)
N7: (10.100,-11.440,7.414)
N9: (8.274,-11.911,8.616)
O5': (7.673,-15.417,6.482)
O3': (4.352,-13.378,6.946)
Image (generated by PyMOL):