Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:995:985
Extra
PDB:
ATOM 1 O3' C A 94 43.151 78.884 124.106 1.00 49.18 O
ATOM 2 P C A 95 42.084 77.855 123.484 1.00 50.11 P
ATOM 3 OP1 C A 95 42.063 76.656 124.365 1.00 50.90 O
ATOM 4 OP2 C A 95 42.373 77.695 122.036 1.00 48.00 O
ATOM 5 O5' C A 95 40.689 78.613 123.620 1.00 48.69 O
ATOM 6 C5' C A 95 40.176 79.011 124.901 1.00 47.36 C
ATOM 7 C4' C A 95 38.850 79.721 124.735 1.00 46.58 C
ATOM 8 O4' C A 95 39.045 80.951 123.984 1.00 45.18 O
ATOM 9 C3' C A 95 37.797 78.964 123.940 1.00 46.42 C
ATOM 10 O3' C A 95 37.096 78.023 124.742 1.00 45.53 O
ATOM 11 C2' C A 95 36.894 80.085 123.456 1.00 47.01 C
ATOM 12 O2' C A 95 36.021 80.532 124.477 1.00 48.60 O
ATOM 13 C1' C A 95 37.922 81.178 123.144 1.00 46.82 C
ATOM 14 N1 C A 95 38.379 81.192 121.735 1.00 46.27 N
ATOM 15 C2 C A 95 37.607 81.868 120.769 1.00 45.00 C
ATOM 16 O2 C A 95 36.533 82.382 121.103 1.00 45.34 O
ATOM 17 N3 C A 95 38.052 81.935 119.498 1.00 43.56 N
ATOM 18 C4 C A 95 39.203 81.353 119.165 1.00 43.26 C
ATOM 19 N4 C A 95 39.616 81.471 117.906 1.00 42.29 N
ATOM 20 C5 C A 95 39.987 80.629 120.111 1.00 43.94 C
ATOM 21 C6 C A 95 39.543 80.574 121.371 1.00 44.23 C
ATOM 22 P U A 96 36.329 76.795 124.045 1.00 46.39 P
ATOM 23 OP1 U A 96 35.791 75.949 125.134 1.00 48.22 O
ATOM 24 OP2 U A 96 37.209 76.185 123.019 1.00 44.96 O
ATOM 25 O5' U A 96 35.095 77.485 123.313 1.00 45.58 O
TER
ATOM 1 O3' A B 84 32.393 84.415 109.056 1.00 34.83 O
ATOM 2 P G B 85 33.206 85.731 109.484 1.00 33.39 P
ATOM 3 OP1 G B 85 32.614 86.841 108.693 1.00 33.75 O
ATOM 4 OP2 G B 85 34.665 85.452 109.392 1.00 29.17 O
ATOM 5 O5' G B 85 32.856 85.930 111.025 1.00 33.48 O
ATOM 6 C5' G B 85 31.506 86.155 111.458 1.00 35.15 C
ATOM 7 C4' G B 85 31.451 86.251 112.961 1.00 34.75 C
ATOM 8 O4' G B 85 31.949 85.023 113.544 1.00 38.11 O
ATOM 9 C3' G B 85 32.329 87.318 113.576 1.00 36.11 C
ATOM 10 O3' G B 85 31.664 88.573 113.521 1.00 36.69 O
ATOM 11 C2' G B 85 32.504 86.811 115.006 1.00 37.00 C
ATOM 12 O2' G B 85 31.399 87.071 115.842 1.00 37.43 O
ATOM 13 C1' G B 85 32.566 85.301 114.789 1.00 37.19 C
ATOM 14 N9 G B 85 33.913 84.735 114.790 1.00 39.44 N
ATOM 15 C8 G B 85 34.776 84.634 113.724 1.00 40.09 C
ATOM 16 N7 G B 85 35.918 84.085 114.039 1.00 40.46 N
ATOM 17 C5 G B 85 35.806 83.809 115.395 1.00 41.45 C
ATOM 18 C6 G B 85 36.735 83.218 116.293 1.00 41.85 C
ATOM 19 O6 G B 85 37.879 82.817 116.063 1.00 43.22 O
ATOM 20 N1 G B 85 36.209 83.114 117.575 1.00 42.40 N
ATOM 21 C2 G B 85 34.953 83.521 117.948 1.00 42.60 C
ATOM 22 N2 G B 85 34.623 83.318 119.231 1.00 43.46 N
ATOM 23 N3 G B 85 34.082 84.082 117.125 1.00 42.64 N
ATOM 24 C4 G B 85 34.572 84.195 115.872 1.00 40.93 C
ATOM 25 P U B 86 32.469 89.891 113.093 1.00 35.48 P
ATOM 26 OP1 U B 86 31.746 90.487 111.942 1.00 33.75 O
ATOM 27 OP2 U B 86 33.909 89.552 112.964 1.00 34.96 O
ATOM 28 O5' U B 86 32.297 90.862 114.339 1.00 33.67 O
TER
ATOM 2 P C A 95 42.084 77.855 123.484 1.00 50.11 P
ATOM 3 OP1 C A 95 42.063 76.656 124.365 1.00 50.90 O
ATOM 4 OP2 C A 95 42.373 77.695 122.036 1.00 48.00 O
ATOM 5 O5' C A 95 40.689 78.613 123.620 1.00 48.69 O
ATOM 6 C5' C A 95 40.176 79.011 124.901 1.00 47.36 C
ATOM 7 C4' C A 95 38.850 79.721 124.735 1.00 46.58 C
ATOM 8 O4' C A 95 39.045 80.951 123.984 1.00 45.18 O
ATOM 9 C3' C A 95 37.797 78.964 123.940 1.00 46.42 C
ATOM 10 O3' C A 95 37.096 78.023 124.742 1.00 45.53 O
ATOM 11 C2' C A 95 36.894 80.085 123.456 1.00 47.01 C
ATOM 12 O2' C A 95 36.021 80.532 124.477 1.00 48.60 O
ATOM 13 C1' C A 95 37.922 81.178 123.144 1.00 46.82 C
ATOM 14 N1 C A 95 38.379 81.192 121.735 1.00 46.27 N
ATOM 15 C2 C A 95 37.607 81.868 120.769 1.00 45.00 C
ATOM 16 O2 C A 95 36.533 82.382 121.103 1.00 45.34 O
ATOM 17 N3 C A 95 38.052 81.935 119.498 1.00 43.56 N
ATOM 18 C4 C A 95 39.203 81.353 119.165 1.00 43.26 C
ATOM 19 N4 C A 95 39.616 81.471 117.906 1.00 42.29 N
ATOM 20 C5 C A 95 39.987 80.629 120.111 1.00 43.94 C
ATOM 21 C6 C A 95 39.543 80.574 121.371 1.00 44.23 C
ATOM 22 P U A 96 36.329 76.795 124.045 1.00 46.39 P
ATOM 23 OP1 U A 96 35.791 75.949 125.134 1.00 48.22 O
ATOM 24 OP2 U A 96 37.209 76.185 123.019 1.00 44.96 O
ATOM 25 O5' U A 96 35.095 77.485 123.313 1.00 45.58 O
TER
ATOM 1 O3' A B 84 32.393 84.415 109.056 1.00 34.83 O
ATOM 2 P G B 85 33.206 85.731 109.484 1.00 33.39 P
ATOM 3 OP1 G B 85 32.614 86.841 108.693 1.00 33.75 O
ATOM 4 OP2 G B 85 34.665 85.452 109.392 1.00 29.17 O
ATOM 5 O5' G B 85 32.856 85.930 111.025 1.00 33.48 O
ATOM 6 C5' G B 85 31.506 86.155 111.458 1.00 35.15 C
ATOM 7 C4' G B 85 31.451 86.251 112.961 1.00 34.75 C
ATOM 8 O4' G B 85 31.949 85.023 113.544 1.00 38.11 O
ATOM 9 C3' G B 85 32.329 87.318 113.576 1.00 36.11 C
ATOM 10 O3' G B 85 31.664 88.573 113.521 1.00 36.69 O
ATOM 11 C2' G B 85 32.504 86.811 115.006 1.00 37.00 C
ATOM 12 O2' G B 85 31.399 87.071 115.842 1.00 37.43 O
ATOM 13 C1' G B 85 32.566 85.301 114.789 1.00 37.19 C
ATOM 14 N9 G B 85 33.913 84.735 114.790 1.00 39.44 N
ATOM 15 C8 G B 85 34.776 84.634 113.724 1.00 40.09 C
ATOM 16 N7 G B 85 35.918 84.085 114.039 1.00 40.46 N
ATOM 17 C5 G B 85 35.806 83.809 115.395 1.00 41.45 C
ATOM 18 C6 G B 85 36.735 83.218 116.293 1.00 41.85 C
ATOM 19 O6 G B 85 37.879 82.817 116.063 1.00 43.22 O
ATOM 20 N1 G B 85 36.209 83.114 117.575 1.00 42.40 N
ATOM 21 C2 G B 85 34.953 83.521 117.948 1.00 42.60 C
ATOM 22 N2 G B 85 34.623 83.318 119.231 1.00 43.46 N
ATOM 23 N3 G B 85 34.082 84.082 117.125 1.00 42.64 N
ATOM 24 C4 G B 85 34.572 84.195 115.872 1.00 40.93 C
ATOM 25 P U B 86 32.469 89.891 113.093 1.00 35.48 P
ATOM 26 OP1 U B 86 31.746 90.487 111.942 1.00 33.75 O
ATOM 27 OP2 U B 86 33.909 89.552 112.964 1.00 34.96 O
ATOM 28 O5' U B 86 32.297 90.862 114.339 1.00 33.67 O
TER
Atoms:
C2: (37.607,81.868,120.769)
OP1: (42.063,76.656,124.365)
OP2: (42.373,77.695,122.036)
C4: (39.203,81.353,119.165)
O5': (40.689,78.613,123.620)
C3': (37.797,78.964,123.940)
C1': (37.922,81.178,123.144)
O4': (39.045,80.951,123.984)
C5': (40.176,79.011,124.901)
P: (42.084,77.855,123.484)
O2: (36.533,82.382,121.103)
C4': (38.850,79.721,124.735)
C2': (36.894,80.085,123.456)
O2': (36.021,80.532,124.477)
N1: (38.379,81.192,121.735)
N3: (38.052,81.935,119.498)
N4: (39.616,81.471,117.906)
C6: (39.543,80.574,121.371)
C5: (39.987,80.629,120.111)
O3': (37.096,78.023,124.742)
OP1: (42.063,76.656,124.365)
OP2: (42.373,77.695,122.036)
C4: (39.203,81.353,119.165)
O5': (40.689,78.613,123.620)
C3': (37.797,78.964,123.940)
C1': (37.922,81.178,123.144)
O4': (39.045,80.951,123.984)
C5': (40.176,79.011,124.901)
P: (42.084,77.855,123.484)
O2: (36.533,82.382,121.103)
C4': (38.850,79.721,124.735)
C2': (36.894,80.085,123.456)
O2': (36.021,80.532,124.477)
N1: (38.379,81.192,121.735)
N3: (38.052,81.935,119.498)
N4: (39.616,81.471,117.906)
C6: (39.543,80.574,121.371)
C5: (39.987,80.629,120.111)
O3': (37.096,78.023,124.742)
OP1: (32.614,86.841,108.693)
OP2: (34.665,85.452,109.392)
C3': (32.329,87.318,113.576)
C1': (32.566,85.301,114.789)
C5': (31.506,86.155,111.458)
O6: (37.879,82.817,116.063)
O4': (31.949,85.023,113.544)
C8: (34.776,84.634,113.724)
C2: (34.953,83.521,117.948)
C6: (36.735,83.218,116.293)
C5: (35.806,83.809,115.395)
C4: (34.572,84.195,115.872)
P: (33.206,85.731,109.484)
C4': (31.451,86.251,112.961)
C2': (32.504,86.811,115.006)
O2': (31.399,87.071,115.842)
N1: (36.209,83.114,117.575)
N2: (34.623,83.318,119.231)
N3: (34.082,84.082,117.125)
N7: (35.918,84.085,114.039)
N9: (33.913,84.735,114.790)
O5': (32.856,85.930,111.025)
O3': (31.664,88.573,113.521)
OP2: (34.665,85.452,109.392)
C3': (32.329,87.318,113.576)
C1': (32.566,85.301,114.789)
C5': (31.506,86.155,111.458)
O6: (37.879,82.817,116.063)
O4': (31.949,85.023,113.544)
C8: (34.776,84.634,113.724)
C2: (34.953,83.521,117.948)
C6: (36.735,83.218,116.293)
C5: (35.806,83.809,115.395)
C4: (34.572,84.195,115.872)
P: (33.206,85.731,109.484)
C4': (31.451,86.251,112.961)
C2': (32.504,86.811,115.006)
O2': (31.399,87.071,115.842)
N1: (36.209,83.114,117.575)
N2: (34.623,83.318,119.231)
N3: (34.082,84.082,117.125)
N7: (35.918,84.085,114.039)
N9: (33.913,84.735,114.790)
O5': (32.856,85.930,111.025)
O3': (31.664,88.573,113.521)
Image (generated by PyMOL):