ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3AKZ:G55:G57

Extra

PDB:
ATOM 1 O3' G A 54 23.389 26.619 17.124 1.00 72.31 O
ATOM 2 P A A 55 22.005 26.417 16.335 1.00 70.76 P
ATOM 3 OP1 A A 55 21.228 27.678 16.423 1.00 69.56 O
ATOM 4 OP2 A A 55 21.403 25.148 16.817 1.00 70.56 O
ATOM 5 O5' A A 55 22.455 26.204 14.822 1.00 70.87 O
ATOM 6 C5' A A 55 23.306 27.142 14.170 1.00 70.97 C
ATOM 7 C4' A A 55 22.931 27.249 12.713 1.00 70.30 C
ATOM 8 O4' A A 55 23.137 25.963 12.074 1.00 69.65 O
ATOM 9 C3' A A 55 21.479 27.644 12.455 1.00 69.92 C
ATOM 10 O3' A A 55 21.421 28.462 11.293 1.00 67.95 O
ATOM 11 C2' A A 55 20.808 26.304 12.172 1.00 69.80 C
ATOM 12 O2' A A 55 19.658 26.406 11.356 1.00 69.77 O
ATOM 13 C1' A A 55 21.931 25.526 11.489 1.00 69.76 C
ATOM 14 N9 A A 55 21.838 24.081 11.682 1.00 70.57 N
ATOM 15 C8 A A 55 21.508 23.410 12.835 1.00 71.08 C
ATOM 16 N7 A A 55 21.510 22.107 12.707 1.00 70.72 N
ATOM 17 C5 A A 55 21.864 21.903 11.381 1.00 70.90 C
ATOM 18 C6 A A 55 22.044 20.736 10.620 1.00 70.90 C
ATOM 19 N6 A A 55 21.883 19.503 11.106 1.00 70.09 N
ATOM 20 N1 A A 55 22.400 20.881 9.325 1.00 71.27 N
ATOM 21 C2 A A 55 22.561 22.118 8.839 1.00 71.48 C
ATOM 22 N3 A A 55 22.420 23.290 9.453 1.00 70.72 N
ATOM 23 C4 A A 55 22.067 23.111 10.737 1.00 70.80 C
ATOM 24 P G A 56 20.402 29.703 11.243 1.00 66.33 P
ATOM 25 OP1 G A 56 21.119 30.885 11.784 1.00 65.35 O
ATOM 26 OP2 G A 56 19.119 29.279 11.859 1.00 65.73 O
ATOM 27 O5' G A 56 20.160 29.932 9.685 1.00 65.83 O
TER

ATOM 1 O3' G B 56 18.425 27.351 7.435 1.00 65.77 O
ATOM 2 P U B 57 18.843 25.871 7.899 1.00 64.18 P
ATOM 3 OP1 U B 57 17.610 25.105 8.211 1.00 65.18 O
ATOM 4 OP2 U B 57 19.902 26.007 8.929 1.00 65.18 O
ATOM 5 O5' U B 57 19.513 25.236 6.604 1.00 63.60 O
ATOM 6 C5' U B 57 18.951 25.441 5.313 1.00 63.73 C
ATOM 7 C4' U B 57 19.968 25.103 4.254 1.00 64.70 C
ATOM 8 O4' U B 57 21.086 26.024 4.359 1.00 66.06 O
ATOM 9 C3' U B 57 20.545 23.692 4.348 1.00 63.61 C
ATOM 10 O3' U B 57 20.785 23.197 3.038 1.00 59.52 O
ATOM 11 C2' U B 57 21.876 23.917 5.059 1.00 64.54 C
ATOM 12 O2' U B 57 22.845 22.931 4.767 1.00 62.77 O
ATOM 13 C1' U B 57 22.281 25.299 4.545 1.00 66.76 C
ATOM 14 N1 U B 57 23.124 26.042 5.492 1.00 68.63 N
ATOM 15 C2 U B 57 24.470 26.162 5.205 1.00 69.41 C
ATOM 16 O2 U B 57 24.976 25.700 4.196 1.00 70.84 O
ATOM 17 N3 U B 57 25.203 26.845 6.145 1.00 69.40 N
ATOM 18 C4 U B 57 24.735 27.412 7.314 1.00 69.26 C
ATOM 19 O4 U B 57 25.521 27.996 8.062 1.00 69.40 O
ATOM 20 C5 U B 57 23.331 27.254 7.532 1.00 69.27 C
ATOM 21 C6 U B 57 22.592 26.592 6.635 1.00 69.13 C
ATOM 22 P C B 58 20.181 21.771 2.607 1.00 56.46 P
ATOM 23 OP1 C B 58 20.875 21.324 1.373 1.00 56.99 O
ATOM 24 OP2 C B 58 18.702 21.895 2.614 1.00 55.94 O
ATOM 25 O5' C B 58 20.597 20.798 3.798 1.00 53.65 O
TER

Atoms:
OP1: (21.228,27.678,16.423)
OP2: (21.403,25.148,16.817)
C3': (21.479,27.644,12.455)
C1': (21.931,25.526,11.489)
C5': (23.306,27.142,14.170)
O4': (23.137,25.963,12.074)
C8: (21.508,23.410,12.835)
O2': (19.658,26.406,11.356)
C6: (22.044,20.736,10.620)
C5: (21.864,21.903,11.381)
C4: (22.067,23.111,10.737)
P: (22.005,26.417,16.335)
C4': (22.931,27.249,12.713)
C2': (20.808,26.304,12.172)
C2: (22.561,22.118,8.839)
N1: (22.400,20.881,9.325)
N3: (22.420,23.290,9.453)
N6: (21.883,19.503,11.106)
N7: (21.510,22.107,12.707)
N9: (21.838,24.081,11.682)
O5': (22.455,26.204,14.822)
O3': (21.421,28.462,11.293)
C4: (24.735,27.412,7.314)
N3: (25.203,26.845,6.145)
OP1: (17.610,25.105,8.211)
OP2: (19.902,26.007,8.929)
C2: (24.470,26.162,5.205)
C1': (22.281,25.299,4.545)
C3': (20.545,23.692,4.348)
O5': (19.513,25.236,6.604)
O4': (21.086,26.024,4.359)
C5': (18.951,25.441,5.313)
P: (18.843,25.871,7.899)
C4': (19.968,25.103,4.254)
C2': (21.876,23.917,5.059)
O2': (22.845,22.931,4.767)
N1: (23.124,26.042,5.492)
O4: (25.521,27.996,8.062)
O2: (24.976,25.700,4.196)
C6: (22.592,26.592,6.635)
C5: (23.331,27.254,7.532)
O3': (20.785,23.197,3.038)
Image (generated by PyMOL):
PyMOL image
show in jmol