Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2029:A2020
Extra
PDB:
ATOM 1 O3' G A2028 -78.195 -88.690 -3.812 1.00 0.01 O
ATOM 2 P C A2029 -79.260 -89.714 -4.427 1.00 0.01 P
ATOM 3 OP1 C A2029 -79.173 -90.939 -3.618 1.00 0.01 O
ATOM 4 OP2 C A2029 -79.016 -89.821 -5.863 1.00 0.01 O
ATOM 5 O5' C A2029 -80.628 -88.984 -4.168 1.00 0.01 O
ATOM 6 C5' C A2029 -81.433 -89.371 -3.092 1.00 0.01 C
ATOM 7 C4' C A2029 -82.840 -88.919 -3.275 1.00 0.01 C
ATOM 8 O4' C A2029 -82.889 -87.484 -3.261 1.00 0.01 O
ATOM 9 C3' C A2029 -83.484 -89.301 -4.576 1.00 0.01 C
ATOM 10 O3' C A2029 -83.986 -90.607 -4.550 1.00 0.01 O
ATOM 11 C2' C A2029 -84.560 -88.246 -4.730 1.00 0.01 C
ATOM 12 O2' C A2029 -85.676 -88.569 -3.934 1.00 0.01 O
ATOM 13 C1' C A2029 -83.878 -87.026 -4.128 1.00 0.01 C
ATOM 14 N1 C A2029 -83.230 -86.183 -5.126 1.00 0.01 N
ATOM 15 C2 C A2029 -83.985 -85.448 -5.995 1.00 0.01 C
ATOM 16 O2 C A2029 -85.193 -85.553 -5.958 1.00 0.01 O
ATOM 17 N3 C A2029 -83.376 -84.670 -6.876 1.00 0.01 N
ATOM 18 C4 C A2029 -82.059 -84.590 -6.886 1.00 0.01 C
ATOM 19 N4 C A2029 -81.509 -83.806 -7.801 1.00 0.01 N
ATOM 20 C5 C A2029 -81.252 -85.314 -5.981 1.00 0.01 C
ATOM 21 C6 C A2029 -81.881 -86.096 -5.119 1.00 0.01 C
ATOM 22 P A A2030 -83.848 -91.522 -5.819 1.00 0.01 P
ATOM 23 OP1 A A2030 -84.242 -92.856 -5.419 1.00 0.01 O
ATOM 24 OP2 A A2030 -82.523 -91.316 -6.359 1.00 0.01 O
ATOM 25 O5' A A2030 -84.921 -90.926 -6.798 1.00 0.01 O
TER
ATOM 1 O3' U B2019 -87.143 -78.345 -16.270 1.00 0.01 O
ATOM 2 P G B2020 -87.500 -77.486 -14.995 1.00 0.01 P
ATOM 3 OP1 G B2020 -88.630 -76.623 -15.368 1.00 0.01 O
ATOM 4 OP2 G B2020 -86.261 -76.862 -14.535 1.00 0.01 O
ATOM 5 O5' G B2020 -87.968 -78.581 -13.965 1.00 0.01 O
ATOM 6 C5' G B2020 -89.328 -78.899 -13.864 1.00 0.01 C
ATOM 7 C4' G B2020 -89.547 -80.212 -13.186 1.00 0.01 C
ATOM 8 O4' G B2020 -88.433 -81.082 -13.419 1.00 0.01 O
ATOM 9 C3' G B2020 -89.670 -80.172 -11.681 1.00 0.01 C
ATOM 10 O3' G B2020 -90.956 -79.766 -11.256 1.00 0.01 O
ATOM 11 C2' G B2020 -89.348 -81.599 -11.324 1.00 0.01 C
ATOM 12 O2' G B2020 -90.448 -82.435 -11.614 1.00 0.01 O
ATOM 13 C1' G B2020 -88.238 -81.899 -12.309 1.00 0.01 C
ATOM 14 N9 G B2020 -86.939 -81.583 -11.752 1.00 0.01 N
ATOM 15 C8 G B2020 -86.096 -80.594 -12.121 1.00 0.01 C
ATOM 16 N7 G B2020 -85.003 -80.577 -11.428 1.00 0.01 N
ATOM 17 C5 G B2020 -85.158 -81.621 -10.549 1.00 0.01 C
ATOM 18 C6 G B2020 -84.308 -82.111 -9.541 1.00 0.01 C
ATOM 19 O6 G B2020 -83.207 -81.707 -9.174 1.00 0.01 O
ATOM 20 N1 G B2020 -84.865 -83.193 -8.915 1.00 0.01 N
ATOM 21 C2 G B2020 -86.068 -83.713 -9.209 1.00 0.01 C
ATOM 22 N2 G B2020 -86.426 -84.721 -8.469 1.00 0.01 N
ATOM 23 N3 G B2020 -86.869 -83.312 -10.137 1.00 0.01 N
ATOM 24 C4 G B2020 -86.347 -82.254 -10.753 1.00 0.01 C
ATOM 25 P U B2021 -91.131 -78.815 -10.000 1.00 0.01 P
ATOM 26 OP1 U B2021 -92.523 -78.362 -9.992 1.00 0.01 O
ATOM 27 OP2 U B2021 -90.068 -77.825 -10.058 1.00 0.01 O
ATOM 28 O5' U B2021 -90.890 -79.798 -8.805 1.00 0.01 O
TER
ATOM 2 P C A2029 -79.260 -89.714 -4.427 1.00 0.01 P
ATOM 3 OP1 C A2029 -79.173 -90.939 -3.618 1.00 0.01 O
ATOM 4 OP2 C A2029 -79.016 -89.821 -5.863 1.00 0.01 O
ATOM 5 O5' C A2029 -80.628 -88.984 -4.168 1.00 0.01 O
ATOM 6 C5' C A2029 -81.433 -89.371 -3.092 1.00 0.01 C
ATOM 7 C4' C A2029 -82.840 -88.919 -3.275 1.00 0.01 C
ATOM 8 O4' C A2029 -82.889 -87.484 -3.261 1.00 0.01 O
ATOM 9 C3' C A2029 -83.484 -89.301 -4.576 1.00 0.01 C
ATOM 10 O3' C A2029 -83.986 -90.607 -4.550 1.00 0.01 O
ATOM 11 C2' C A2029 -84.560 -88.246 -4.730 1.00 0.01 C
ATOM 12 O2' C A2029 -85.676 -88.569 -3.934 1.00 0.01 O
ATOM 13 C1' C A2029 -83.878 -87.026 -4.128 1.00 0.01 C
ATOM 14 N1 C A2029 -83.230 -86.183 -5.126 1.00 0.01 N
ATOM 15 C2 C A2029 -83.985 -85.448 -5.995 1.00 0.01 C
ATOM 16 O2 C A2029 -85.193 -85.553 -5.958 1.00 0.01 O
ATOM 17 N3 C A2029 -83.376 -84.670 -6.876 1.00 0.01 N
ATOM 18 C4 C A2029 -82.059 -84.590 -6.886 1.00 0.01 C
ATOM 19 N4 C A2029 -81.509 -83.806 -7.801 1.00 0.01 N
ATOM 20 C5 C A2029 -81.252 -85.314 -5.981 1.00 0.01 C
ATOM 21 C6 C A2029 -81.881 -86.096 -5.119 1.00 0.01 C
ATOM 22 P A A2030 -83.848 -91.522 -5.819 1.00 0.01 P
ATOM 23 OP1 A A2030 -84.242 -92.856 -5.419 1.00 0.01 O
ATOM 24 OP2 A A2030 -82.523 -91.316 -6.359 1.00 0.01 O
ATOM 25 O5' A A2030 -84.921 -90.926 -6.798 1.00 0.01 O
TER
ATOM 1 O3' U B2019 -87.143 -78.345 -16.270 1.00 0.01 O
ATOM 2 P G B2020 -87.500 -77.486 -14.995 1.00 0.01 P
ATOM 3 OP1 G B2020 -88.630 -76.623 -15.368 1.00 0.01 O
ATOM 4 OP2 G B2020 -86.261 -76.862 -14.535 1.00 0.01 O
ATOM 5 O5' G B2020 -87.968 -78.581 -13.965 1.00 0.01 O
ATOM 6 C5' G B2020 -89.328 -78.899 -13.864 1.00 0.01 C
ATOM 7 C4' G B2020 -89.547 -80.212 -13.186 1.00 0.01 C
ATOM 8 O4' G B2020 -88.433 -81.082 -13.419 1.00 0.01 O
ATOM 9 C3' G B2020 -89.670 -80.172 -11.681 1.00 0.01 C
ATOM 10 O3' G B2020 -90.956 -79.766 -11.256 1.00 0.01 O
ATOM 11 C2' G B2020 -89.348 -81.599 -11.324 1.00 0.01 C
ATOM 12 O2' G B2020 -90.448 -82.435 -11.614 1.00 0.01 O
ATOM 13 C1' G B2020 -88.238 -81.899 -12.309 1.00 0.01 C
ATOM 14 N9 G B2020 -86.939 -81.583 -11.752 1.00 0.01 N
ATOM 15 C8 G B2020 -86.096 -80.594 -12.121 1.00 0.01 C
ATOM 16 N7 G B2020 -85.003 -80.577 -11.428 1.00 0.01 N
ATOM 17 C5 G B2020 -85.158 -81.621 -10.549 1.00 0.01 C
ATOM 18 C6 G B2020 -84.308 -82.111 -9.541 1.00 0.01 C
ATOM 19 O6 G B2020 -83.207 -81.707 -9.174 1.00 0.01 O
ATOM 20 N1 G B2020 -84.865 -83.193 -8.915 1.00 0.01 N
ATOM 21 C2 G B2020 -86.068 -83.713 -9.209 1.00 0.01 C
ATOM 22 N2 G B2020 -86.426 -84.721 -8.469 1.00 0.01 N
ATOM 23 N3 G B2020 -86.869 -83.312 -10.137 1.00 0.01 N
ATOM 24 C4 G B2020 -86.347 -82.254 -10.753 1.00 0.01 C
ATOM 25 P U B2021 -91.131 -78.815 -10.000 1.00 0.01 P
ATOM 26 OP1 U B2021 -92.523 -78.362 -9.992 1.00 0.01 O
ATOM 27 OP2 U B2021 -90.068 -77.825 -10.058 1.00 0.01 O
ATOM 28 O5' U B2021 -90.890 -79.798 -8.805 1.00 0.01 O
TER
Atoms:
C2: (-83.985,-85.448,-5.995)
OP1: (-79.173,-90.939,-3.618)
OP2: (-79.016,-89.821,-5.863)
C4: (-82.059,-84.590,-6.886)
O5': (-80.628,-88.984,-4.168)
C3': (-83.484,-89.301,-4.576)
C1': (-83.878,-87.026,-4.128)
O4': (-82.889,-87.484,-3.261)
C5': (-81.433,-89.371,-3.092)
P: (-79.260,-89.714,-4.427)
O2: (-85.193,-85.553,-5.958)
C4': (-82.840,-88.919,-3.275)
C2': (-84.560,-88.246,-4.730)
O2': (-85.676,-88.569,-3.934)
N1: (-83.230,-86.183,-5.126)
N3: (-83.376,-84.670,-6.876)
N4: (-81.509,-83.806,-7.801)
C6: (-81.881,-86.096,-5.119)
C5: (-81.252,-85.314,-5.981)
O3': (-83.986,-90.607,-4.550)
OP1: (-79.173,-90.939,-3.618)
OP2: (-79.016,-89.821,-5.863)
C4: (-82.059,-84.590,-6.886)
O5': (-80.628,-88.984,-4.168)
C3': (-83.484,-89.301,-4.576)
C1': (-83.878,-87.026,-4.128)
O4': (-82.889,-87.484,-3.261)
C5': (-81.433,-89.371,-3.092)
P: (-79.260,-89.714,-4.427)
O2: (-85.193,-85.553,-5.958)
C4': (-82.840,-88.919,-3.275)
C2': (-84.560,-88.246,-4.730)
O2': (-85.676,-88.569,-3.934)
N1: (-83.230,-86.183,-5.126)
N3: (-83.376,-84.670,-6.876)
N4: (-81.509,-83.806,-7.801)
C6: (-81.881,-86.096,-5.119)
C5: (-81.252,-85.314,-5.981)
O3': (-83.986,-90.607,-4.550)
OP1: (-88.630,-76.623,-15.368)
OP2: (-86.261,-76.862,-14.535)
C3': (-89.670,-80.172,-11.681)
C1': (-88.238,-81.899,-12.309)
C5': (-89.328,-78.899,-13.864)
O6: (-83.207,-81.707,-9.174)
O4': (-88.433,-81.082,-13.419)
C8: (-86.096,-80.594,-12.121)
C2: (-86.068,-83.713,-9.209)
C6: (-84.308,-82.111,-9.541)
C5: (-85.158,-81.621,-10.549)
C4: (-86.347,-82.254,-10.753)
P: (-87.500,-77.486,-14.995)
C4': (-89.547,-80.212,-13.186)
C2': (-89.348,-81.599,-11.324)
O2': (-90.448,-82.435,-11.614)
N1: (-84.865,-83.193,-8.915)
N2: (-86.426,-84.721,-8.469)
N3: (-86.869,-83.312,-10.137)
N7: (-85.003,-80.577,-11.428)
N9: (-86.939,-81.583,-11.752)
O5': (-87.968,-78.581,-13.965)
O3': (-90.956,-79.766,-11.256)
OP2: (-86.261,-76.862,-14.535)
C3': (-89.670,-80.172,-11.681)
C1': (-88.238,-81.899,-12.309)
C5': (-89.328,-78.899,-13.864)
O6: (-83.207,-81.707,-9.174)
O4': (-88.433,-81.082,-13.419)
C8: (-86.096,-80.594,-12.121)
C2: (-86.068,-83.713,-9.209)
C6: (-84.308,-82.111,-9.541)
C5: (-85.158,-81.621,-10.549)
C4: (-86.347,-82.254,-10.753)
P: (-87.500,-77.486,-14.995)
C4': (-89.547,-80.212,-13.186)
C2': (-89.348,-81.599,-11.324)
O2': (-90.448,-82.435,-11.614)
N1: (-84.865,-83.193,-8.915)
N2: (-86.426,-84.721,-8.469)
N3: (-86.869,-83.312,-10.137)
N7: (-85.003,-80.577,-11.428)
N9: (-86.939,-81.583,-11.752)
O5': (-87.968,-78.581,-13.965)
O3': (-90.956,-79.766,-11.256)
Image (generated by PyMOL):