ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZH7:B16:B18

Extra

PDB:
ATOM 1 O3' G A 15 -37.887 48.148 11.406 1.00 51.69 O
ATOM 2 P A A 16 -37.141 48.127 12.832 1.00 57.77 P
ATOM 3 OP1 A A 16 -38.185 48.122 13.881 1.00 58.19 O
ATOM 4 OP2 A A 16 -36.071 49.156 12.874 1.00 56.36 O
ATOM 5 O5' A A 16 -36.414 46.716 12.838 1.00 58.33 O
ATOM 6 C5' A A 16 -37.162 45.517 12.888 1.00 60.33 C
ATOM 7 C4' A A 16 -36.325 44.435 13.499 1.00 62.59 C
ATOM 8 O4' A A 16 -35.127 44.307 12.692 1.00 63.04 O
ATOM 9 C3' A A 16 -35.796 44.733 14.895 1.00 64.68 C
ATOM 10 O3' A A 16 -36.760 44.525 15.943 1.00 64.93 O
ATOM 11 C2' A A 16 -34.521 43.904 14.960 1.00 65.94 C
ATOM 12 O2' A A 16 -34.694 42.538 15.263 1.00 70.28 O
ATOM 13 C1' A A 16 -34.015 44.015 13.522 1.00 64.26 C
ATOM 14 N9 A A 16 -32.985 45.035 13.331 1.00 62.40 N
ATOM 15 C8 A A 16 -32.935 46.324 13.807 1.00 61.58 C
ATOM 16 N7 A A 16 -31.847 46.972 13.466 1.00 60.85 N
ATOM 17 C5 A A 16 -31.135 46.050 12.709 1.00 61.98 C
ATOM 18 C6 A A 16 -29.891 46.120 12.040 1.00 62.30 C
ATOM 19 N6 A A 16 -29.112 47.207 12.028 1.00 62.21 N
ATOM 20 N1 A A 16 -29.473 45.015 11.374 1.00 61.89 N
ATOM 21 C2 A A 16 -30.254 43.924 11.385 1.00 61.63 C
ATOM 22 N3 A A 16 -31.436 43.738 11.971 1.00 61.18 N
ATOM 23 C4 A A 16 -31.825 44.852 12.621 1.00 62.07 C
ATOM 24 P U A 17 -37.508 43.097 16.122 1.00 95.82 P
ATOM 25 OP1 U A 17 -38.027 42.646 14.797 1.00 96.85 O
ATOM 26 OP2 U A 17 -38.446 43.243 17.268 1.00 96.10 O
ATOM 27 O5' U A 17 -36.383 42.066 16.579 1.00 96.76 O
TER

ATOM 1 O3' U B 17 -33.338 40.358 17.606 1.00 99.04 O
ATOM 2 P U B 18 -32.085 40.894 16.736 1.00 78.16 P
ATOM 3 OP1 U B 18 -30.825 40.636 17.483 1.00 78.29 O
ATOM 4 OP2 U B 18 -32.415 42.280 16.310 1.00 77.69 O
ATOM 5 O5' U B 18 -32.058 39.948 15.453 1.00 78.25 O
ATOM 6 C5' U B 18 -31.151 38.849 15.367 1.00 77.60 C
ATOM 7 C4' U B 18 -30.943 38.476 13.923 1.00 77.36 C
ATOM 8 O4' U B 18 -32.208 38.041 13.370 1.00 77.15 O
ATOM 9 C3' U B 18 -30.505 39.635 13.046 1.00 77.97 C
ATOM 10 O3' U B 18 -29.088 39.840 13.109 1.00 78.72 O
ATOM 11 C2' U B 18 -31.104 39.323 11.676 1.00 77.82 C
ATOM 12 O2' U B 18 -30.298 38.556 10.806 1.00 78.84 O
ATOM 13 C1' U B 18 -32.368 38.547 12.056 1.00 77.47 C
ATOM 14 N1 U B 18 -33.618 39.319 12.015 1.00 77.04 N
ATOM 15 C2 U B 18 -34.239 39.476 10.792 1.00 76.15 C
ATOM 16 O2 U B 18 -33.764 39.048 9.759 1.00 75.70 O
ATOM 17 N3 U B 18 -35.430 40.162 10.829 1.00 76.17 N
ATOM 18 C4 U B 18 -36.046 40.707 11.945 1.00 76.96 C
ATOM 19 O4 U B 18 -37.159 41.235 11.833 1.00 77.13 O
ATOM 20 C5 U B 18 -35.324 40.528 13.168 1.00 77.10 C
ATOM 21 C6 U B 18 -34.164 39.857 13.162 1.00 77.16 C
ATOM 22 P C B 19 -28.063 38.600 12.933 1.00 63.44 P
ATOM 23 OP1 C B 19 -28.581 37.550 12.024 1.00 64.12 O
ATOM 24 OP2 C B 19 -27.631 38.235 14.304 1.00 62.26 O
ATOM 25 O5' C B 19 -26.801 39.265 12.238 1.00 62.54 O
TER

Atoms:
OP1: (-38.185,48.122,13.881)
OP2: (-36.071,49.156,12.874)
C3': (-35.796,44.733,14.895)
C1': (-34.015,44.015,13.522)
C5': (-37.162,45.517,12.888)
O4': (-35.127,44.307,12.692)
C8: (-32.935,46.324,13.807)
O2': (-34.694,42.538,15.263)
C6: (-29.891,46.120,12.040)
C5: (-31.135,46.050,12.709)
C4: (-31.825,44.852,12.621)
P: (-37.141,48.127,12.832)
C4': (-36.325,44.435,13.499)
C2': (-34.521,43.904,14.960)
C2: (-30.254,43.924,11.385)
N1: (-29.473,45.015,11.374)
N3: (-31.436,43.738,11.971)
N6: (-29.112,47.207,12.028)
N7: (-31.847,46.972,13.466)
N9: (-32.985,45.035,13.331)
O5': (-36.414,46.716,12.838)
O3': (-36.760,44.525,15.943)
C4: (-36.046,40.707,11.945)
N3: (-35.430,40.162,10.829)
OP1: (-30.825,40.636,17.483)
OP2: (-32.415,42.280,16.310)
C2: (-34.239,39.476,10.792)
C1': (-32.368,38.547,12.056)
C3': (-30.505,39.635,13.046)
O5': (-32.058,39.948,15.453)
O4': (-32.208,38.041,13.370)
C5': (-31.151,38.849,15.367)
P: (-32.085,40.894,16.736)
C4': (-30.943,38.476,13.923)
C2': (-31.104,39.323,11.676)
O2': (-30.298,38.556,10.806)
N1: (-33.618,39.319,12.015)
O4: (-37.159,41.235,11.833)
O2: (-33.764,39.048,9.759)
C6: (-34.164,39.857,13.162)
C5: (-35.324,40.528,13.168)
O3': (-29.088,39.840,13.109)
Image (generated by PyMOL):
PyMOL image
show in jmol