Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1350:A1352
Extra
PDB:
ATOM 1 O3' U A1349 14.905 -56.395 -22.506 1.00 51.52 O
ATOM 2 P A A1350 14.792 -55.031 -21.664 1.00 44.75 P
ATOM 3 OP1 A A1350 16.038 -54.287 -21.967 1.00 43.75 O
ATOM 4 OP2 A A1350 14.460 -55.348 -20.249 1.00 48.81 O
ATOM 5 O5' A A1350 13.565 -54.317 -22.393 1.00 50.71 O
ATOM 6 C5' A A1350 12.615 -53.513 -21.705 1.00 55.67 C
ATOM 7 C4' A A1350 11.425 -53.241 -22.606 1.00 48.36 C
ATOM 8 O4' A A1350 10.579 -54.397 -22.715 1.00 52.36 O
ATOM 9 C3' A A1350 10.462 -52.160 -22.155 1.00 45.36 C
ATOM 10 O3' A A1350 10.938 -50.951 -22.708 1.00 48.48 O
ATOM 11 C2' A A1350 9.126 -52.547 -22.813 1.00 47.87 C
ATOM 12 O2' A A1350 8.752 -51.744 -23.915 1.00 55.47 O
ATOM 13 C1' A A1350 9.375 -53.974 -23.289 1.00 44.20 C
ATOM 14 N9 A A1350 8.328 -54.941 -22.991 1.00 46.86 N
ATOM 15 C8 A A1350 7.650 -55.176 -21.817 1.00 52.92 C
ATOM 16 N7 A A1350 6.770 -56.148 -21.899 1.00 54.05 N
ATOM 17 C5 A A1350 6.876 -56.581 -23.218 1.00 52.91 C
ATOM 18 C6 A A1350 6.210 -57.596 -23.947 1.00 52.88 C
ATOM 19 N6 A A1350 5.279 -58.399 -23.424 1.00 60.65 N
ATOM 20 N1 A A1350 6.543 -57.759 -25.252 1.00 51.57 N
ATOM 21 C2 A A1350 7.479 -56.960 -25.782 1.00 49.99 C
ATOM 22 N3 A A1350 8.179 -55.981 -25.202 1.00 48.10 N
ATOM 23 C4 A A1350 7.826 -55.840 -23.904 1.00 51.71 C
ATOM 24 P U A1351 11.770 -49.924 -21.808 1.00 48.71 P
ATOM 25 OP1 U A1351 13.134 -49.857 -22.420 1.00 47.82 O
ATOM 26 OP2 U A1351 11.630 -50.312 -20.379 1.00 49.45 O
ATOM 27 O5' U A1351 10.957 -48.576 -22.030 1.00 44.35 O
TER
ATOM 1 O3' U B1351 7.513 -47.445 -24.436 1.00 56.38 O
ATOM 2 P U B1352 6.708 -48.809 -24.732 1.00 56.10 P
ATOM 3 OP1 U B1352 5.360 -48.429 -25.227 1.00 56.44 O
ATOM 4 OP2 U B1352 6.830 -49.727 -23.559 1.00 46.96 O
ATOM 5 O5' U B1352 7.505 -49.475 -25.938 1.00 52.14 O
ATOM 6 C5' U B1352 7.305 -49.027 -27.280 1.00 50.51 C
ATOM 7 C4' U B1352 7.769 -50.055 -28.265 1.00 47.81 C
ATOM 8 O4' U B1352 9.214 -50.101 -28.259 1.00 52.77 O
ATOM 9 C3' U B1352 7.276 -51.477 -28.048 1.00 44.35 C
ATOM 10 O3' U B1352 6.926 -52.007 -29.313 1.00 40.35 O
ATOM 11 C2' U B1352 8.493 -52.197 -27.477 1.00 48.70 C
ATOM 12 O2' U B1352 8.592 -53.560 -27.839 1.00 56.60 O
ATOM 13 C1' U B1352 9.645 -51.445 -28.133 1.00 56.28 C
ATOM 14 N1 U B1352 10.889 -51.510 -27.340 1.00 55.75 N
ATOM 15 C2 U B1352 11.947 -52.317 -27.801 1.00 55.28 C
ATOM 16 O2 U B1352 11.895 -52.976 -28.830 1.00 52.18 O
ATOM 17 N3 U B1352 13.062 -52.316 -27.004 1.00 58.87 N
ATOM 18 C4 U B1352 13.236 -51.615 -25.818 1.00 60.48 C
ATOM 19 O4 U B1352 14.315 -51.678 -25.216 1.00 61.23 O
ATOM 20 C5 U B1352 12.114 -50.827 -25.415 1.00 57.86 C
ATOM 21 C6 U B1352 11.013 -50.801 -26.165 1.00 56.21 C
ATOM 22 P C B1353 5.372 -52.070 -29.744 1.00 46.26 P
ATOM 23 OP1 C B1353 5.241 -52.229 -31.215 1.00 40.30 O
ATOM 24 OP2 C B1353 4.702 -50.923 -29.064 1.00 52.56 O
ATOM 25 O5' C B1353 4.810 -53.425 -29.121 1.00 43.65 O
TER
ATOM 2 P A A1350 14.792 -55.031 -21.664 1.00 44.75 P
ATOM 3 OP1 A A1350 16.038 -54.287 -21.967 1.00 43.75 O
ATOM 4 OP2 A A1350 14.460 -55.348 -20.249 1.00 48.81 O
ATOM 5 O5' A A1350 13.565 -54.317 -22.393 1.00 50.71 O
ATOM 6 C5' A A1350 12.615 -53.513 -21.705 1.00 55.67 C
ATOM 7 C4' A A1350 11.425 -53.241 -22.606 1.00 48.36 C
ATOM 8 O4' A A1350 10.579 -54.397 -22.715 1.00 52.36 O
ATOM 9 C3' A A1350 10.462 -52.160 -22.155 1.00 45.36 C
ATOM 10 O3' A A1350 10.938 -50.951 -22.708 1.00 48.48 O
ATOM 11 C2' A A1350 9.126 -52.547 -22.813 1.00 47.87 C
ATOM 12 O2' A A1350 8.752 -51.744 -23.915 1.00 55.47 O
ATOM 13 C1' A A1350 9.375 -53.974 -23.289 1.00 44.20 C
ATOM 14 N9 A A1350 8.328 -54.941 -22.991 1.00 46.86 N
ATOM 15 C8 A A1350 7.650 -55.176 -21.817 1.00 52.92 C
ATOM 16 N7 A A1350 6.770 -56.148 -21.899 1.00 54.05 N
ATOM 17 C5 A A1350 6.876 -56.581 -23.218 1.00 52.91 C
ATOM 18 C6 A A1350 6.210 -57.596 -23.947 1.00 52.88 C
ATOM 19 N6 A A1350 5.279 -58.399 -23.424 1.00 60.65 N
ATOM 20 N1 A A1350 6.543 -57.759 -25.252 1.00 51.57 N
ATOM 21 C2 A A1350 7.479 -56.960 -25.782 1.00 49.99 C
ATOM 22 N3 A A1350 8.179 -55.981 -25.202 1.00 48.10 N
ATOM 23 C4 A A1350 7.826 -55.840 -23.904 1.00 51.71 C
ATOM 24 P U A1351 11.770 -49.924 -21.808 1.00 48.71 P
ATOM 25 OP1 U A1351 13.134 -49.857 -22.420 1.00 47.82 O
ATOM 26 OP2 U A1351 11.630 -50.312 -20.379 1.00 49.45 O
ATOM 27 O5' U A1351 10.957 -48.576 -22.030 1.00 44.35 O
TER
ATOM 1 O3' U B1351 7.513 -47.445 -24.436 1.00 56.38 O
ATOM 2 P U B1352 6.708 -48.809 -24.732 1.00 56.10 P
ATOM 3 OP1 U B1352 5.360 -48.429 -25.227 1.00 56.44 O
ATOM 4 OP2 U B1352 6.830 -49.727 -23.559 1.00 46.96 O
ATOM 5 O5' U B1352 7.505 -49.475 -25.938 1.00 52.14 O
ATOM 6 C5' U B1352 7.305 -49.027 -27.280 1.00 50.51 C
ATOM 7 C4' U B1352 7.769 -50.055 -28.265 1.00 47.81 C
ATOM 8 O4' U B1352 9.214 -50.101 -28.259 1.00 52.77 O
ATOM 9 C3' U B1352 7.276 -51.477 -28.048 1.00 44.35 C
ATOM 10 O3' U B1352 6.926 -52.007 -29.313 1.00 40.35 O
ATOM 11 C2' U B1352 8.493 -52.197 -27.477 1.00 48.70 C
ATOM 12 O2' U B1352 8.592 -53.560 -27.839 1.00 56.60 O
ATOM 13 C1' U B1352 9.645 -51.445 -28.133 1.00 56.28 C
ATOM 14 N1 U B1352 10.889 -51.510 -27.340 1.00 55.75 N
ATOM 15 C2 U B1352 11.947 -52.317 -27.801 1.00 55.28 C
ATOM 16 O2 U B1352 11.895 -52.976 -28.830 1.00 52.18 O
ATOM 17 N3 U B1352 13.062 -52.316 -27.004 1.00 58.87 N
ATOM 18 C4 U B1352 13.236 -51.615 -25.818 1.00 60.48 C
ATOM 19 O4 U B1352 14.315 -51.678 -25.216 1.00 61.23 O
ATOM 20 C5 U B1352 12.114 -50.827 -25.415 1.00 57.86 C
ATOM 21 C6 U B1352 11.013 -50.801 -26.165 1.00 56.21 C
ATOM 22 P C B1353 5.372 -52.070 -29.744 1.00 46.26 P
ATOM 23 OP1 C B1353 5.241 -52.229 -31.215 1.00 40.30 O
ATOM 24 OP2 C B1353 4.702 -50.923 -29.064 1.00 52.56 O
ATOM 25 O5' C B1353 4.810 -53.425 -29.121 1.00 43.65 O
TER
Atoms:
OP1: (16.038,-54.287,-21.967)
OP2: (14.460,-55.348,-20.249)
C3': (10.462,-52.160,-22.155)
C1': (9.375,-53.974,-23.289)
C5': (12.615,-53.513,-21.705)
O4': (10.579,-54.397,-22.715)
C8: (7.650,-55.176,-21.817)
O2': (8.752,-51.744,-23.915)
C6: (6.210,-57.596,-23.947)
C5: (6.876,-56.581,-23.218)
C4: (7.826,-55.840,-23.904)
P: (14.792,-55.031,-21.664)
C4': (11.425,-53.241,-22.606)
C2': (9.126,-52.547,-22.813)
C2: (7.479,-56.960,-25.782)
N1: (6.543,-57.759,-25.252)
N3: (8.179,-55.981,-25.202)
N6: (5.279,-58.399,-23.424)
N7: (6.770,-56.148,-21.899)
N9: (8.328,-54.941,-22.991)
O5': (13.565,-54.317,-22.393)
O3': (10.938,-50.951,-22.708)
OP2: (14.460,-55.348,-20.249)
C3': (10.462,-52.160,-22.155)
C1': (9.375,-53.974,-23.289)
C5': (12.615,-53.513,-21.705)
O4': (10.579,-54.397,-22.715)
C8: (7.650,-55.176,-21.817)
O2': (8.752,-51.744,-23.915)
C6: (6.210,-57.596,-23.947)
C5: (6.876,-56.581,-23.218)
C4: (7.826,-55.840,-23.904)
P: (14.792,-55.031,-21.664)
C4': (11.425,-53.241,-22.606)
C2': (9.126,-52.547,-22.813)
C2: (7.479,-56.960,-25.782)
N1: (6.543,-57.759,-25.252)
N3: (8.179,-55.981,-25.202)
N6: (5.279,-58.399,-23.424)
N7: (6.770,-56.148,-21.899)
N9: (8.328,-54.941,-22.991)
O5': (13.565,-54.317,-22.393)
O3': (10.938,-50.951,-22.708)
C4: (13.236,-51.615,-25.818)
N3: (13.062,-52.316,-27.004)
OP1: (5.360,-48.429,-25.227)
OP2: (6.830,-49.727,-23.559)
C2: (11.947,-52.317,-27.801)
C1': (9.645,-51.445,-28.133)
C3': (7.276,-51.477,-28.048)
O5': (7.505,-49.475,-25.938)
O4': (9.214,-50.101,-28.259)
C5': (7.305,-49.027,-27.280)
P: (6.708,-48.809,-24.732)
C4': (7.769,-50.055,-28.265)
C2': (8.493,-52.197,-27.477)
O2': (8.592,-53.560,-27.839)
N1: (10.889,-51.510,-27.340)
O4: (14.315,-51.678,-25.216)
O2: (11.895,-52.976,-28.830)
C6: (11.013,-50.801,-26.165)
C5: (12.114,-50.827,-25.415)
O3': (6.926,-52.007,-29.313)
N3: (13.062,-52.316,-27.004)
OP1: (5.360,-48.429,-25.227)
OP2: (6.830,-49.727,-23.559)
C2: (11.947,-52.317,-27.801)
C1': (9.645,-51.445,-28.133)
C3': (7.276,-51.477,-28.048)
O5': (7.505,-49.475,-25.938)
O4': (9.214,-50.101,-28.259)
C5': (7.305,-49.027,-27.280)
P: (6.708,-48.809,-24.732)
C4': (7.769,-50.055,-28.265)
C2': (8.493,-52.197,-27.477)
O2': (8.592,-53.560,-27.839)
N1: (10.889,-51.510,-27.340)
O4: (14.315,-51.678,-25.216)
O2: (11.895,-52.976,-28.830)
C6: (11.013,-50.801,-26.165)
C5: (12.114,-50.827,-25.415)
O3': (6.926,-52.007,-29.313)
Image (generated by PyMOL):