ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1344:A1346

Extra

PDB:
ATOM 1 O3' U A1343 15.442 -56.319 -21.851 1.00 37.73 O
ATOM 2 P A A1344 15.335 -55.021 -20.941 1.00 51.57 P
ATOM 3 OP1 A A1344 16.647 -54.331 -21.033 1.00 71.60 O
ATOM 4 OP2 A A1344 14.838 -55.448 -19.601 1.00 49.05 O
ATOM 5 O5' A A1344 14.244 -54.173 -21.688 1.00 55.37 O
ATOM 6 C5' A A1344 13.396 -53.277 -20.998 1.00 55.37 C
ATOM 7 C4' A A1344 12.232 -52.911 -21.870 1.00 55.99 C
ATOM 8 O4' A A1344 11.409 -54.061 -22.106 1.00 51.48 O
ATOM 9 C3' A A1344 11.288 -51.851 -21.353 1.00 48.58 C
ATOM 10 O3' A A1344 11.718 -50.569 -21.746 1.00 60.45 O
ATOM 11 C2' A A1344 9.938 -52.220 -21.977 1.00 53.11 C
ATOM 12 O2' A A1344 9.664 -51.366 -23.072 1.00 69.27 O
ATOM 13 C1' A A1344 10.165 -53.631 -22.521 1.00 52.20 C
ATOM 14 N9 A A1344 9.152 -54.603 -22.107 1.00 53.94 N
ATOM 15 C8 A A1344 8.515 -54.877 -20.943 1.00 56.55 C
ATOM 16 N7 A A1344 7.679 -55.876 -21.062 1.00 55.66 N
ATOM 17 C5 A A1344 7.774 -56.276 -22.375 1.00 53.10 C
ATOM 18 C6 A A1344 7.144 -57.273 -23.129 1.00 63.33 C
ATOM 19 N6 A A1344 6.226 -58.122 -22.656 1.00 71.27 N
ATOM 20 N1 A A1344 7.489 -57.378 -24.423 1.00 65.10 N
ATOM 21 C2 A A1344 8.415 -56.534 -24.899 1.00 69.09 C
ATOM 22 N3 A A1344 9.077 -55.555 -24.293 1.00 56.63 N
ATOM 23 C4 A A1344 8.688 -55.492 -23.019 1.00 53.80 C
ATOM 24 P U A1345 12.324 -49.548 -20.689 1.00 60.40 P
ATOM 25 OP1 U A1345 13.699 -49.229 -21.120 1.00 71.98 O
ATOM 26 OP2 U A1345 12.105 -50.132 -19.344 1.00 68.48 O
ATOM 27 O5' U A1345 11.405 -48.284 -20.881 1.00 62.25 O
TER

ATOM 1 O3' U B1345 8.137 -47.517 -23.652 1.00 68.85 O
ATOM 2 P U B1346 7.330 -48.892 -23.836 1.00 41.67 P
ATOM 3 OP1 U B1346 5.923 -48.524 -24.068 1.00 63.93 O
ATOM 4 OP2 U B1346 7.643 -49.753 -22.694 1.00 54.08 O
ATOM 5 O5' U B1346 7.977 -49.483 -25.150 1.00 42.35 O
ATOM 6 C5' U B1346 7.991 -48.725 -26.349 1.00 51.18 C
ATOM 7 C4' U B1346 8.358 -49.574 -27.532 1.00 46.68 C
ATOM 8 O4' U B1346 9.807 -49.726 -27.564 1.00 59.75 O
ATOM 9 C3' U B1346 7.785 -50.987 -27.496 1.00 45.98 C
ATOM 10 O3' U B1346 7.409 -51.401 -28.811 1.00 53.83 O
ATOM 11 C2' U B1346 8.971 -51.805 -26.981 1.00 54.21 C
ATOM 12 O2' U B1346 8.956 -53.178 -27.291 1.00 55.58 O
ATOM 13 C1' U B1346 10.127 -51.102 -27.642 1.00 59.11 C
ATOM 14 N1 U B1346 11.416 -51.352 -26.976 1.00 56.88 N
ATOM 15 C2 U B1346 12.191 -52.407 -27.446 1.00 59.53 C
ATOM 16 O2 U B1346 11.899 -53.117 -28.385 1.00 60.20 O
ATOM 17 N3 U B1346 13.360 -52.612 -26.778 1.00 60.91 N
ATOM 18 C4 U B1346 13.803 -51.870 -25.697 1.00 61.69 C
ATOM 19 O4 U B1346 14.883 -52.149 -25.168 1.00 66.14 O
ATOM 20 C5 U B1346 12.941 -50.810 -25.266 1.00 52.41 C
ATOM 21 C6 U B1346 11.794 -50.601 -25.902 1.00 53.17 C
ATOM 22 P C B1347 5.845 -51.571 -29.166 1.00 54.90 P
ATOM 23 OP1 C B1347 5.741 -51.805 -30.620 1.00 38.10 O
ATOM 24 OP2 C B1347 5.142 -50.400 -28.567 1.00 51.22 O
ATOM 25 O5' C B1347 5.446 -52.899 -28.379 1.00 49.65 O
TER

Atoms:
OP1: (16.647,-54.331,-21.033)
OP2: (14.838,-55.448,-19.601)
C3': (11.288,-51.851,-21.353)
C1': (10.165,-53.631,-22.521)
C5': (13.396,-53.277,-20.998)
O4': (11.409,-54.061,-22.106)
C8: (8.515,-54.877,-20.943)
O2': (9.664,-51.366,-23.072)
C6: (7.144,-57.273,-23.129)
C5: (7.774,-56.276,-22.375)
C4: (8.688,-55.492,-23.019)
P: (15.335,-55.021,-20.941)
C4': (12.232,-52.911,-21.870)
C2': (9.938,-52.220,-21.977)
C2: (8.415,-56.534,-24.899)
N1: (7.489,-57.378,-24.423)
N3: (9.077,-55.555,-24.293)
N6: (6.226,-58.122,-22.656)
N7: (7.679,-55.876,-21.062)
N9: (9.152,-54.603,-22.107)
O5': (14.244,-54.173,-21.688)
O3': (11.718,-50.569,-21.746)
C4: (13.803,-51.870,-25.697)
N3: (13.360,-52.612,-26.778)
OP1: (5.923,-48.524,-24.068)
OP2: (7.643,-49.753,-22.694)
C2: (12.191,-52.407,-27.446)
C1': (10.127,-51.102,-27.642)
C3': (7.785,-50.987,-27.496)
O5': (7.977,-49.483,-25.150)
O4': (9.807,-49.726,-27.564)
C5': (7.991,-48.725,-26.349)
P: (7.330,-48.892,-23.836)
C4': (8.358,-49.574,-27.532)
C2': (8.971,-51.805,-26.981)
O2': (8.956,-53.178,-27.291)
N1: (11.416,-51.352,-26.976)
O4: (14.883,-52.149,-25.168)
O2: (11.899,-53.117,-28.385)
C6: (11.794,-50.601,-25.902)
C5: (12.941,-50.810,-25.266)
O3': (7.409,-51.401,-28.811)
Image (generated by PyMOL):
PyMOL image
show in jmol