ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2O3W:B8:A12

Extra

PDB:
ATOM 1 O3' U A 7 5.301 -0.999 9.497 1.00 56.75 O
ATOM 2 P C A 8 5.072 -0.334 8.063 1.00 54.11 P
ATOM 3 OP1 C A 8 4.715 -1.385 7.075 1.00 49.10 O
ATOM 4 OP2 C A 8 6.216 0.591 7.803 1.00 54.46 O
ATOM 5 O5' C A 8 3.797 0.582 8.282 1.00 53.34 O
ATOM 6 C5' C A 8 2.513 0.017 8.487 1.00 51.07 C
ATOM 7 C4' C A 8 1.581 1.070 9.028 1.00 46.73 C
ATOM 8 O4' C A 8 2.200 1.677 10.199 1.00 42.65 O
ATOM 9 C3' C A 8 1.372 2.275 8.129 1.00 44.18 C
ATOM 10 O3' C A 8 0.443 2.010 7.090 1.00 45.83 O
ATOM 11 C2' C A 8 0.847 3.294 9.125 1.00 41.65 C
ATOM 12 O2' C A 8 -0.480 3.015 9.502 1.00 42.82 O
ATOM 13 C1' C A 8 1.760 3.020 10.317 1.00 39.12 C
ATOM 14 N1 C A 8 2.925 3.904 10.301 1.00 35.42 N
ATOM 15 C2 C A 8 2.755 5.201 10.736 1.00 34.34 C
ATOM 16 O2 C A 8 1.652 5.532 11.113 1.00 34.19 O
ATOM 17 N3 C A 8 3.798 6.053 10.727 1.00 34.42 N
ATOM 18 C4 C A 8 4.991 5.630 10.292 1.00 32.15 C
ATOM 19 N4 C A 8 5.998 6.484 10.304 1.00 33.75 N
ATOM 20 C5 C A 8 5.198 4.308 9.835 1.00 29.28 C
ATOM 21 C6 C A 8 4.148 3.479 9.860 1.00 33.73 C
ATOM 22 P C A 9 0.544 2.831 5.711 1.00 45.84 P
ATOM 23 OP1 C A 9 -0.356 2.208 4.714 1.00 44.63 O
ATOM 24 OP2 C A 9 1.976 3.036 5.387 1.00 46.12 O
ATOM 25 O5' C A 9 -0.113 4.228 6.070 1.00 43.93 O
TER

ATOM 1 O3' G B 11 3.739 18.484 12.450 1.00 63.22 O
ATOM 2 P G B 12 3.745 17.807 13.906 1.00 67.48 P
ATOM 3 OP1 G B 12 3.113 18.812 14.799 1.00 68.16 O
ATOM 4 OP2 G B 12 5.112 17.310 14.209 1.00 67.56 O
ATOM 5 O5' G B 12 2.762 16.552 13.764 1.00 67.48 O
ATOM 6 C5' G B 12 1.395 16.746 13.408 1.00 65.45 C
ATOM 7 C4' G B 12 0.709 15.429 13.115 1.00 62.63 C
ATOM 8 O4' G B 12 1.341 14.760 11.995 1.00 58.45 O
ATOM 9 C3' G B 12 0.720 14.343 14.177 1.00 63.65 C
ATOM 10 O3' G B 12 -0.214 14.611 15.216 1.00 68.81 O
ATOM 11 C2' G B 12 0.266 13.143 13.352 1.00 60.03 C
ATOM 12 O2' G B 12 -1.119 13.187 13.073 1.00 57.10 O
ATOM 13 C1' G B 12 1.036 13.372 12.052 1.00 56.28 C
ATOM 14 N9 G B 12 2.274 12.601 12.006 1.00 51.16 N
ATOM 15 C8 G B 12 3.555 13.065 12.162 1.00 50.87 C
ATOM 16 N7 G B 12 4.457 12.127 12.054 1.00 47.42 N
ATOM 17 C5 G B 12 3.725 10.976 11.809 1.00 46.96 C
ATOM 18 C6 G B 12 4.156 9.641 11.565 1.00 46.21 C
ATOM 19 O6 G B 12 5.318 9.202 11.500 1.00 45.11 O
ATOM 20 N1 G B 12 3.075 8.786 11.369 1.00 43.93 N
ATOM 21 C2 G B 12 1.760 9.171 11.388 1.00 44.88 C
ATOM 22 N2 G B 12 0.866 8.210 11.181 1.00 44.39 N
ATOM 23 N3 G B 12 1.351 10.409 11.594 1.00 45.91 N
ATOM 24 C4 G B 12 2.376 11.252 11.792 1.00 47.73 C
ATOM 25 P A B 13 -0.076 13.858 16.633 1.00 70.56 P
ATOM 26 OP1 A B 13 -1.043 14.593 17.489 1.00 71.62 O
ATOM 27 OP2 A B 13 1.357 13.784 17.035 1.00 69.03 O
ATOM 28 O5' A B 13 -0.626 12.376 16.384 1.00 65.33 O
TER

Atoms:
C2: (2.755,5.201,10.736)
OP1: (4.715,-1.385,7.075)
OP2: (6.216,0.591,7.803)
C4: (4.991,5.630,10.292)
O5': (3.797,0.582,8.282)
C3': (1.372,2.275,8.129)
C1': (1.760,3.020,10.317)
O4': (2.200,1.677,10.199)
C5': (2.513,0.017,8.487)
P: (5.072,-0.334,8.063)
O2: (1.652,5.532,11.113)
C4': (1.581,1.070,9.028)
C2': (0.847,3.294,9.125)
O2': (-0.480,3.015,9.502)
N1: (2.925,3.904,10.301)
N3: (3.798,6.053,10.727)
N4: (5.998,6.484,10.304)
C6: (4.148,3.479,9.860)
C5: (5.198,4.308,9.835)
O3': (0.443,2.010,7.090)
OP1: (3.113,18.812,14.799)
OP2: (5.112,17.310,14.209)
C3': (0.720,14.343,14.177)
C1': (1.036,13.372,12.052)
C5': (1.395,16.746,13.408)
O6: (5.318,9.202,11.500)
O4': (1.341,14.760,11.995)
C8: (3.555,13.065,12.162)
C2: (1.760,9.171,11.388)
C6: (4.156,9.641,11.565)
C5: (3.725,10.976,11.809)
C4: (2.376,11.252,11.792)
P: (3.745,17.807,13.906)
C4': (0.709,15.429,13.115)
C2': (0.266,13.143,13.352)
O2': (-1.119,13.187,13.073)
N1: (3.075,8.786,11.369)
N2: (0.866,8.210,11.181)
N3: (1.351,10.409,11.594)
N7: (4.457,12.127,12.054)
N9: (2.274,12.601,12.006)
O5': (2.762,16.552,13.764)
O3': (-0.214,14.611,15.216)
Image (generated by PyMOL):
PyMOL image
show in jmol