ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZM5:D57:D59

Extra

PDB:
ATOM 1 O3' G A 56 9.800 10.109 68.808 1.00 94.15 O
ATOM 2 P A A 57 9.334 10.966 70.087 1.00 96.03 P
ATOM 3 OP1 A A 57 10.403 11.963 70.354 1.00 96.08 O
ATOM 4 OP2 A A 57 8.919 10.030 71.165 1.00 95.94 O
ATOM 5 O5' A A 57 8.049 11.751 69.573 1.00 95.60 O
ATOM 6 C5' A A 57 8.074 12.453 68.336 1.00 96.71 C
ATOM 7 C4' A A 57 7.028 13.538 68.335 1.00 97.43 C
ATOM 8 O4' A A 57 5.725 12.933 68.490 1.00 97.35 O
ATOM 9 C3' A A 57 7.152 14.564 69.453 1.00 97.60 C
ATOM 10 O3' A A 57 8.007 15.613 68.974 1.00 98.00 O
ATOM 11 C2' A A 57 5.706 15.015 69.671 1.00 97.73 C
ATOM 12 O2' A A 57 5.332 16.086 68.826 1.00 98.00 O
ATOM 13 C1' A A 57 4.910 13.757 69.296 1.00 97.22 C
ATOM 14 N9 A A 57 4.408 12.934 70.394 1.00 96.96 N
ATOM 15 C8 A A 57 5.118 12.321 71.398 1.00 97.35 C
ATOM 16 N7 A A 57 4.378 11.589 72.196 1.00 96.42 N
ATOM 17 C5 A A 57 3.094 11.741 71.692 1.00 96.13 C
ATOM 18 C6 A A 57 1.852 11.207 72.086 1.00 96.37 C
ATOM 19 N6 A A 57 1.697 10.374 73.115 1.00 95.92 N
ATOM 20 N1 A A 57 0.760 11.563 71.374 1.00 95.85 N
ATOM 21 C2 A A 57 0.917 12.394 70.336 1.00 96.10 C
ATOM 22 N3 A A 57 2.031 12.954 69.864 1.00 96.13 N
ATOM 23 C4 A A 57 3.096 12.581 70.594 1.00 96.33 C
ATOM 24 P U A 58 8.349 16.880 69.907 1.00 98.00 P
ATOM 25 OP1 U A 58 9.672 17.394 69.473 1.00 97.87 O
ATOM 26 OP2 U A 58 8.141 16.505 71.325 1.00 98.00 O
ATOM 27 O5' U A 58 7.241 17.961 69.524 1.00 98.00 O
TER

ATOM 1 O3' U B 58 4.071 19.075 71.340 1.00 97.31 O
ATOM 2 P U B 59 2.927 18.047 71.792 1.00 95.58 P
ATOM 3 OP1 U B 59 2.720 18.278 73.245 1.00 96.85 O
ATOM 4 OP2 U B 59 3.293 16.692 71.309 1.00 93.44 O
ATOM 5 O5' U B 59 1.637 18.560 71.008 1.00 95.23 O
ATOM 6 C5' U B 59 0.427 17.814 71.024 1.00 95.47 C
ATOM 7 C4' U B 59 -0.280 17.928 69.692 1.00 95.74 C
ATOM 8 O4' U B 59 0.693 17.835 68.633 1.00 96.13 O
ATOM 9 C3' U B 59 -1.312 16.832 69.440 1.00 95.37 C
ATOM 10 O3' U B 59 -2.622 17.321 69.742 1.00 94.10 O
ATOM 11 C2' U B 59 -1.245 16.588 67.926 1.00 95.98 C
ATOM 12 O2' U B 59 -2.244 17.277 67.201 1.00 98.00 O
ATOM 13 C1' U B 59 0.121 17.165 67.533 1.00 95.45 C
ATOM 14 N1 U B 59 1.132 16.289 66.914 1.00 93.46 N
ATOM 15 C2 U B 59 0.797 15.604 65.754 1.00 91.66 C
ATOM 16 O2 U B 59 -0.326 15.606 65.276 1.00 89.95 O
ATOM 17 N3 U B 59 1.832 14.907 65.181 1.00 91.31 N
ATOM 18 C4 U B 59 3.133 14.807 65.648 1.00 91.70 C
ATOM 19 O4 U B 59 3.982 14.216 64.973 1.00 90.78 O
ATOM 20 C5 U B 59 3.378 15.493 66.871 1.00 91.88 C
ATOM 21 C6 U B 59 2.400 16.189 67.448 1.00 93.28 C
ATOM 22 P C B 60 -3.102 17.504 71.264 1.00 94.13 P
ATOM 23 OP1 C B 60 -4.479 18.060 71.198 1.00 93.84 O
ATOM 24 OP2 C B 60 -2.064 18.233 72.032 1.00 94.44 O
ATOM 25 O5' C B 60 -3.192 16.017 71.821 1.00 94.22 O
TER

Atoms:
OP1: (10.403,11.963,70.354)
OP2: (8.919,10.030,71.165)
C3': (7.152,14.564,69.453)
C1': (4.910,13.757,69.296)
C5': (8.074,12.453,68.336)
O4': (5.725,12.933,68.490)
C8: (5.118,12.321,71.398)
O2': (5.332,16.086,68.826)
C6: (1.852,11.207,72.086)
C5: (3.094,11.741,71.692)
C4: (3.096,12.581,70.594)
P: (9.334,10.966,70.087)
C4': (7.028,13.538,68.335)
C2': (5.706,15.015,69.671)
C2: (0.917,12.394,70.336)
N1: (0.760,11.563,71.374)
N3: (2.031,12.954,69.864)
N6: (1.697,10.374,73.115)
N7: (4.378,11.589,72.196)
N9: (4.408,12.934,70.394)
O5': (8.049,11.751,69.573)
O3': (8.007,15.613,68.974)
C4: (3.133,14.807,65.648)
N3: (1.832,14.907,65.181)
OP1: (2.720,18.278,73.245)
OP2: (3.293,16.692,71.309)
C2: (0.797,15.604,65.754)
C1': (0.121,17.165,67.533)
C3': (-1.312,16.832,69.440)
O5': (1.637,18.560,71.008)
O4': (0.693,17.835,68.633)
C5': (0.427,17.814,71.024)
P: (2.927,18.047,71.792)
C4': (-0.280,17.928,69.692)
C2': (-1.245,16.588,67.926)
O2': (-2.244,17.277,67.201)
N1: (1.132,16.289,66.914)
O4: (3.982,14.216,64.973)
O2: (-0.326,15.606,65.276)
C6: (2.400,16.189,67.448)
C5: (3.378,15.493,66.871)
O3': (-2.622,17.321,69.742)
Image (generated by PyMOL):
PyMOL image
show in jmol