Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:V57:V59
Extra
PDB:
ATOM 1 O3' G A 56 -129.426 -2.023 44.306 1.00122.33 O
ATOM 2 P A A 57 -128.064 -2.855 44.456 1.00114.77 P
ATOM 3 OP1 A A 57 -128.435 -4.220 44.916 1.00114.77 O
ATOM 4 OP2 A A 57 -127.146 -2.036 45.301 1.00114.77 O
ATOM 5 O5' A A 57 -127.521 -2.913 42.959 1.00114.77 O
ATOM 6 C5' A A 57 -126.839 -1.801 42.379 1.00114.77 C
ATOM 7 C4' A A 57 -125.390 -2.126 42.092 1.00114.77 C
ATOM 8 O4' A A 57 -124.566 -1.682 43.212 1.00114.77 O
ATOM 9 C3' A A 57 -125.087 -3.613 41.910 1.00114.77 C
ATOM 10 O3' A A 57 -124.005 -3.774 40.987 1.00114.77 O
ATOM 11 C2' A A 57 -124.644 -4.027 43.309 1.00114.77 C
ATOM 12 O2' A A 57 -123.865 -5.204 43.364 1.00114.77 O
ATOM 13 C1' A A 57 -123.862 -2.788 43.749 1.00114.77 C
ATOM 14 N9 A A 57 -123.777 -2.616 45.201 1.00111.99 N
ATOM 15 C8 A A 57 -124.650 -3.059 46.160 1.00111.99 C
ATOM 16 N7 A A 57 -124.289 -2.755 47.385 1.00111.99 N
ATOM 17 C5 A A 57 -123.092 -2.064 47.234 1.00111.99 C
ATOM 18 C6 A A 57 -122.195 -1.471 48.159 1.00111.99 C
ATOM 19 N6 A A 57 -122.345 -1.459 49.489 1.00111.99 N
ATOM 20 N1 A A 57 -121.103 -0.866 47.647 1.00111.99 N
ATOM 21 C2 A A 57 -120.930 -0.871 46.317 1.00111.99 C
ATOM 22 N3 A A 57 -121.694 -1.381 45.353 1.00111.99 N
ATOM 23 C4 A A 57 -122.772 -1.977 45.884 1.00111.99 C
ATOM 24 P U A 58 -124.282 -4.326 39.498 1.00113.23 P
ATOM 25 OP1 U A 58 -125.356 -3.485 38.911 1.00113.23 O
ATOM 26 OP2 U A 58 -124.503 -5.800 39.610 1.00113.23 O
ATOM 27 O5' U A 58 -122.908 -4.035 38.751 1.00113.23 O
TER
ATOM 1 O3' U B 58 -119.714 -5.527 40.050 1.00113.23 O
ATOM 2 P U B 59 -119.713 -5.481 41.662 1.00106.94 P
ATOM 3 OP1 U B 59 -119.904 -6.874 42.141 1.00106.94 O
ATOM 4 OP2 U B 59 -120.691 -4.447 42.075 1.00106.94 O
ATOM 5 O5' U B 59 -118.237 -4.996 41.998 1.00106.94 O
ATOM 6 C5' U B 59 -117.990 -4.146 43.106 1.00106.94 C
ATOM 7 C4' U B 59 -117.137 -2.967 42.722 1.00106.94 C
ATOM 8 O4' U B 59 -117.759 -2.282 41.603 1.00106.94 O
ATOM 9 C3' U B 59 -116.937 -1.933 43.821 1.00106.94 C
ATOM 10 O3' U B 59 -115.586 -1.460 43.805 1.00106.94 O
ATOM 11 C2' U B 59 -117.918 -0.805 43.466 1.00106.94 C
ATOM 12 O2' U B 59 -117.478 0.492 43.825 1.00106.94 O
ATOM 13 C1' U B 59 -118.094 -0.946 41.945 1.00106.94 C
ATOM 14 N1 U B 59 -119.500 -0.698 41.475 1.00105.70 N
ATOM 15 C2 U B 59 -120.029 0.589 41.416 1.00105.70 C
ATOM 16 O2 U B 59 -119.395 1.590 41.729 1.00105.70 O
ATOM 17 N3 U B 59 -121.343 0.655 40.972 1.00105.70 N
ATOM 18 C4 U B 59 -122.173 -0.399 40.591 1.00105.70 C
ATOM 19 O4 U B 59 -123.332 -0.201 40.203 1.00105.70 O
ATOM 20 C5 U B 59 -121.562 -1.685 40.677 1.00105.70 C
ATOM 21 C6 U B 59 -120.294 -1.774 41.105 1.00105.70 C
ATOM 22 P C B 60 -114.443 -2.253 44.634 1.00128.51 P
ATOM 23 OP1 C B 60 -113.293 -1.326 44.799 1.00128.51 O
ATOM 24 OP2 C B 60 -114.220 -3.555 43.946 1.00128.51 O
ATOM 25 O5' C B 60 -115.141 -2.505 46.043 1.00128.51 O
TER
ATOM 2 P A A 57 -128.064 -2.855 44.456 1.00114.77 P
ATOM 3 OP1 A A 57 -128.435 -4.220 44.916 1.00114.77 O
ATOM 4 OP2 A A 57 -127.146 -2.036 45.301 1.00114.77 O
ATOM 5 O5' A A 57 -127.521 -2.913 42.959 1.00114.77 O
ATOM 6 C5' A A 57 -126.839 -1.801 42.379 1.00114.77 C
ATOM 7 C4' A A 57 -125.390 -2.126 42.092 1.00114.77 C
ATOM 8 O4' A A 57 -124.566 -1.682 43.212 1.00114.77 O
ATOM 9 C3' A A 57 -125.087 -3.613 41.910 1.00114.77 C
ATOM 10 O3' A A 57 -124.005 -3.774 40.987 1.00114.77 O
ATOM 11 C2' A A 57 -124.644 -4.027 43.309 1.00114.77 C
ATOM 12 O2' A A 57 -123.865 -5.204 43.364 1.00114.77 O
ATOM 13 C1' A A 57 -123.862 -2.788 43.749 1.00114.77 C
ATOM 14 N9 A A 57 -123.777 -2.616 45.201 1.00111.99 N
ATOM 15 C8 A A 57 -124.650 -3.059 46.160 1.00111.99 C
ATOM 16 N7 A A 57 -124.289 -2.755 47.385 1.00111.99 N
ATOM 17 C5 A A 57 -123.092 -2.064 47.234 1.00111.99 C
ATOM 18 C6 A A 57 -122.195 -1.471 48.159 1.00111.99 C
ATOM 19 N6 A A 57 -122.345 -1.459 49.489 1.00111.99 N
ATOM 20 N1 A A 57 -121.103 -0.866 47.647 1.00111.99 N
ATOM 21 C2 A A 57 -120.930 -0.871 46.317 1.00111.99 C
ATOM 22 N3 A A 57 -121.694 -1.381 45.353 1.00111.99 N
ATOM 23 C4 A A 57 -122.772 -1.977 45.884 1.00111.99 C
ATOM 24 P U A 58 -124.282 -4.326 39.498 1.00113.23 P
ATOM 25 OP1 U A 58 -125.356 -3.485 38.911 1.00113.23 O
ATOM 26 OP2 U A 58 -124.503 -5.800 39.610 1.00113.23 O
ATOM 27 O5' U A 58 -122.908 -4.035 38.751 1.00113.23 O
TER
ATOM 1 O3' U B 58 -119.714 -5.527 40.050 1.00113.23 O
ATOM 2 P U B 59 -119.713 -5.481 41.662 1.00106.94 P
ATOM 3 OP1 U B 59 -119.904 -6.874 42.141 1.00106.94 O
ATOM 4 OP2 U B 59 -120.691 -4.447 42.075 1.00106.94 O
ATOM 5 O5' U B 59 -118.237 -4.996 41.998 1.00106.94 O
ATOM 6 C5' U B 59 -117.990 -4.146 43.106 1.00106.94 C
ATOM 7 C4' U B 59 -117.137 -2.967 42.722 1.00106.94 C
ATOM 8 O4' U B 59 -117.759 -2.282 41.603 1.00106.94 O
ATOM 9 C3' U B 59 -116.937 -1.933 43.821 1.00106.94 C
ATOM 10 O3' U B 59 -115.586 -1.460 43.805 1.00106.94 O
ATOM 11 C2' U B 59 -117.918 -0.805 43.466 1.00106.94 C
ATOM 12 O2' U B 59 -117.478 0.492 43.825 1.00106.94 O
ATOM 13 C1' U B 59 -118.094 -0.946 41.945 1.00106.94 C
ATOM 14 N1 U B 59 -119.500 -0.698 41.475 1.00105.70 N
ATOM 15 C2 U B 59 -120.029 0.589 41.416 1.00105.70 C
ATOM 16 O2 U B 59 -119.395 1.590 41.729 1.00105.70 O
ATOM 17 N3 U B 59 -121.343 0.655 40.972 1.00105.70 N
ATOM 18 C4 U B 59 -122.173 -0.399 40.591 1.00105.70 C
ATOM 19 O4 U B 59 -123.332 -0.201 40.203 1.00105.70 O
ATOM 20 C5 U B 59 -121.562 -1.685 40.677 1.00105.70 C
ATOM 21 C6 U B 59 -120.294 -1.774 41.105 1.00105.70 C
ATOM 22 P C B 60 -114.443 -2.253 44.634 1.00128.51 P
ATOM 23 OP1 C B 60 -113.293 -1.326 44.799 1.00128.51 O
ATOM 24 OP2 C B 60 -114.220 -3.555 43.946 1.00128.51 O
ATOM 25 O5' C B 60 -115.141 -2.505 46.043 1.00128.51 O
TER
Atoms:
OP1: (-128.435,-4.220,44.916)
OP2: (-127.146,-2.036,45.301)
C3': (-125.087,-3.613,41.910)
C1': (-123.862,-2.788,43.749)
C5': (-126.839,-1.801,42.379)
O4': (-124.566,-1.682,43.212)
C8: (-124.650,-3.059,46.160)
O2': (-123.865,-5.204,43.364)
C6: (-122.195,-1.471,48.159)
C5: (-123.092,-2.064,47.234)
C4: (-122.772,-1.977,45.884)
P: (-128.064,-2.855,44.456)
C4': (-125.390,-2.126,42.092)
C2': (-124.644,-4.027,43.309)
C2: (-120.930,-0.871,46.317)
N1: (-121.103,-0.866,47.647)
N3: (-121.694,-1.381,45.353)
N6: (-122.345,-1.459,49.489)
N7: (-124.289,-2.755,47.385)
N9: (-123.777,-2.616,45.201)
O5': (-127.521,-2.913,42.959)
O3': (-124.005,-3.774,40.987)
OP2: (-127.146,-2.036,45.301)
C3': (-125.087,-3.613,41.910)
C1': (-123.862,-2.788,43.749)
C5': (-126.839,-1.801,42.379)
O4': (-124.566,-1.682,43.212)
C8: (-124.650,-3.059,46.160)
O2': (-123.865,-5.204,43.364)
C6: (-122.195,-1.471,48.159)
C5: (-123.092,-2.064,47.234)
C4: (-122.772,-1.977,45.884)
P: (-128.064,-2.855,44.456)
C4': (-125.390,-2.126,42.092)
C2': (-124.644,-4.027,43.309)
C2: (-120.930,-0.871,46.317)
N1: (-121.103,-0.866,47.647)
N3: (-121.694,-1.381,45.353)
N6: (-122.345,-1.459,49.489)
N7: (-124.289,-2.755,47.385)
N9: (-123.777,-2.616,45.201)
O5': (-127.521,-2.913,42.959)
O3': (-124.005,-3.774,40.987)
C4: (-122.173,-0.399,40.591)
N3: (-121.343,0.655,40.972)
OP1: (-119.904,-6.874,42.141)
OP2: (-120.691,-4.447,42.075)
C2: (-120.029,0.589,41.416)
C1': (-118.094,-0.946,41.945)
C3': (-116.937,-1.933,43.821)
O5': (-118.237,-4.996,41.998)
O4': (-117.759,-2.282,41.603)
C5': (-117.990,-4.146,43.106)
P: (-119.713,-5.481,41.662)
C4': (-117.137,-2.967,42.722)
C2': (-117.918,-0.805,43.466)
O2': (-117.478,0.492,43.825)
N1: (-119.500,-0.698,41.475)
O4: (-123.332,-0.201,40.203)
O2: (-119.395,1.590,41.729)
C6: (-120.294,-1.774,41.105)
C5: (-121.562,-1.685,40.677)
O3': (-115.586,-1.460,43.805)
N3: (-121.343,0.655,40.972)
OP1: (-119.904,-6.874,42.141)
OP2: (-120.691,-4.447,42.075)
C2: (-120.029,0.589,41.416)
C1': (-118.094,-0.946,41.945)
C3': (-116.937,-1.933,43.821)
O5': (-118.237,-4.996,41.998)
O4': (-117.759,-2.282,41.603)
C5': (-117.990,-4.146,43.106)
P: (-119.713,-5.481,41.662)
C4': (-117.137,-2.967,42.722)
C2': (-117.918,-0.805,43.466)
O2': (-117.478,0.492,43.825)
N1: (-119.500,-0.698,41.475)
O4: (-123.332,-0.201,40.203)
O2: (-119.395,1.590,41.729)
C6: (-120.294,-1.774,41.105)
C5: (-121.562,-1.685,40.677)
O3': (-115.586,-1.460,43.805)
Image (generated by PyMOL):