ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A2337:A2412

Extra

PDB:
ATOM 1 O3' U A2336 85.408 -54.233 2.634 1.00 44.02 O
ATOM 2 P C A2337 85.105 -54.192 4.203 1.00 39.65 P
ATOM 3 OP1 C A2337 86.256 -54.824 4.877 1.00 40.16 O
ATOM 4 OP2 C A2337 83.743 -54.760 4.418 1.00 47.17 O
ATOM 5 O5' C A2337 85.097 -52.634 4.501 1.00 40.97 O
ATOM 6 C5' C A2337 86.258 -51.845 4.300 1.00 32.49 C
ATOM 7 C4' C A2337 86.151 -50.540 5.036 1.00 30.82 C
ATOM 8 O4' C A2337 85.245 -49.655 4.331 1.00 35.26 O
ATOM 9 C3' C A2337 85.573 -50.638 6.428 1.00 33.25 C
ATOM 10 O3' C A2337 86.540 -50.986 7.394 1.00 28.70 O
ATOM 11 C2' C A2337 84.949 -49.271 6.640 1.00 32.69 C
ATOM 12 O2' C A2337 85.936 -48.315 6.971 1.00 32.77 O
ATOM 13 C1' C A2337 84.433 -48.963 5.241 1.00 35.92 C
ATOM 14 N1 C A2337 83.044 -49.417 5.059 1.00 34.05 N
ATOM 15 C2 C A2337 82.050 -48.704 5.722 1.00 36.61 C
ATOM 16 O2 C A2337 82.372 -47.743 6.412 1.00 39.07 O
ATOM 17 N3 C A2337 80.755 -49.054 5.620 1.00 39.01 N
ATOM 18 C4 C A2337 80.425 -50.100 4.874 1.00 40.67 C
ATOM 19 N4 C A2337 79.118 -50.393 4.802 1.00 35.62 N
ATOM 20 C5 C A2337 81.429 -50.862 4.178 1.00 40.10 C
ATOM 21 C6 C A2337 82.715 -50.494 4.289 1.00 32.97 C
ATOM 22 P G A2338 86.090 -51.634 8.792 1.00 24.98 P
ATOM 23 OP1 G A2338 87.258 -51.604 9.675 1.00 43.95 O
ATOM 24 OP2 G A2338 85.443 -52.939 8.516 1.00 34.44 O
ATOM 25 O5' G A2338 85.006 -50.604 9.301 1.00 34.36 O
TER

ATOM 1 O3' G B2411 73.068 -46.155 4.488 1.00 29.41 O
ATOM 2 P G B2412 72.554 -44.665 4.288 1.00 42.08 P
ATOM 3 OP1 G B2412 71.107 -44.733 3.948 1.00 29.61 O
ATOM 4 OP2 G B2412 73.496 -44.008 3.315 1.00 44.20 O
ATOM 5 O5' G B2412 72.752 -44.059 5.762 1.00 37.27 O
ATOM 6 C5' G B2412 72.845 -42.658 5.977 1.00 34.89 C
ATOM 7 C4' G B2412 74.078 -42.298 6.767 1.00 43.20 C
ATOM 8 O4' G B2412 74.246 -43.223 7.875 1.00 35.88 O
ATOM 9 C3' G B2412 75.411 -42.358 6.021 1.00 38.68 C
ATOM 10 O3' G B2412 75.655 -41.193 5.257 1.00 44.80 O
ATOM 11 C2' G B2412 76.387 -42.511 7.158 1.00 34.53 C
ATOM 12 O2' G B2412 76.535 -41.259 7.807 1.00 34.72 O
ATOM 13 C1' G B2412 75.618 -43.458 8.096 1.00 35.04 C
ATOM 14 N9 G B2412 75.880 -44.881 7.796 1.00 33.51 N
ATOM 15 C8 G B2412 74.872 -45.806 7.712 1.00 34.77 C
ATOM 16 N7 G B2412 75.258 -47.009 7.405 1.00 32.74 N
ATOM 17 C5 G B2412 76.628 -46.877 7.248 1.00 38.07 C
ATOM 18 C6 G B2412 77.594 -47.861 6.899 1.00 35.98 C
ATOM 19 O6 G B2412 77.432 -49.058 6.646 1.00 33.33 O
ATOM 20 N1 G B2412 78.875 -47.345 6.864 1.00 35.92 N
ATOM 21 C2 G B2412 79.194 -46.040 7.123 1.00 38.34 C
ATOM 22 N2 G B2412 80.510 -45.757 7.005 1.00 39.71 N
ATOM 23 N3 G B2412 78.298 -45.101 7.452 1.00 35.30 N
ATOM 24 C4 G B2412 77.036 -45.577 7.498 1.00 35.45 C
ATOM 25 P G B2413 76.291 -41.298 3.793 1.00 45.33 P
ATOM 26 OP1 G B2413 76.275 -39.919 3.212 1.00 53.40 O
ATOM 27 OP2 G B2413 75.565 -42.390 3.085 1.00 62.44 O
ATOM 28 O5' G B2413 77.793 -41.744 4.092 1.00 44.14 O
TER

Atoms:
C2: (82.050,-48.704,5.722)
OP1: (86.256,-54.824,4.877)
OP2: (83.743,-54.760,4.418)
C4: (80.425,-50.100,4.874)
O5': (85.097,-52.634,4.501)
C3': (85.573,-50.638,6.428)
C1': (84.433,-48.963,5.241)
O4': (85.245,-49.655,4.331)
C5': (86.258,-51.845,4.300)
P: (85.105,-54.192,4.203)
O2: (82.372,-47.743,6.412)
C4': (86.151,-50.540,5.036)
C2': (84.949,-49.271,6.640)
O2': (85.936,-48.315,6.971)
N1: (83.044,-49.417,5.059)
N3: (80.755,-49.054,5.620)
N4: (79.118,-50.393,4.802)
C6: (82.715,-50.494,4.289)
C5: (81.429,-50.862,4.178)
O3': (86.540,-50.986,7.394)
OP1: (71.107,-44.733,3.948)
OP2: (73.496,-44.008,3.315)
C3': (75.411,-42.358,6.021)
C1': (75.618,-43.458,8.096)
C5': (72.845,-42.658,5.977)
O6: (77.432,-49.058,6.646)
O4': (74.246,-43.223,7.875)
C8: (74.872,-45.806,7.712)
C2: (79.194,-46.040,7.123)
C6: (77.594,-47.861,6.899)
C5: (76.628,-46.877,7.248)
C4: (77.036,-45.577,7.498)
P: (72.554,-44.665,4.288)
C4': (74.078,-42.298,6.767)
C2': (76.387,-42.511,7.158)
O2': (76.535,-41.259,7.807)
N1: (78.875,-47.345,6.864)
N2: (80.510,-45.757,7.005)
N3: (78.298,-45.101,7.452)
N7: (75.258,-47.009,7.405)
N9: (75.880,-44.881,7.796)
O5': (72.752,-44.059,5.762)
O3': (75.655,-41.193,5.257)
Image (generated by PyMOL):
PyMOL image
show in jmol