Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBX:B72:B11
Extra
PDB:
ATOM 1 O3' A A 71 18.047 109.548 89.075 1.00107.60 O
ATOM 2 P C A 72 18.147 111.074 88.589 1.00106.54 P
ATOM 3 OP1 C A 72 17.277 111.891 89.474 1.00105.55 O
ATOM 4 OP2 C A 72 17.935 111.101 87.119 1.00106.12 O
ATOM 5 O5' C A 72 19.668 111.459 88.868 1.00106.81 O
ATOM 6 C5' C A 72 20.311 112.487 88.118 1.00106.73 C
ATOM 7 C4' C A 72 21.778 112.170 87.945 1.00106.21 C
ATOM 8 O4' C A 72 21.925 110.811 87.468 1.00106.42 O
ATOM 9 C3' C A 72 22.510 113.011 86.912 1.00105.95 C
ATOM 10 O3' C A 72 22.743 114.385 87.208 1.00105.66 O
ATOM 11 C2' C A 72 23.677 112.119 86.518 1.00106.25 C
ATOM 12 O2' C A 72 24.738 112.173 87.452 1.00105.92 O
ATOM 13 C1' C A 72 23.025 110.735 86.575 1.00106.75 C
ATOM 14 N1 C A 72 22.505 110.297 85.270 1.00107.64 N
ATOM 15 C2 C A 72 23.414 109.978 84.257 1.00107.95 C
ATOM 16 O2 C A 72 24.634 110.068 84.488 1.00107.20 O
ATOM 17 N3 C A 72 22.939 109.579 83.051 1.00107.92 N
ATOM 18 C4 C A 72 21.621 109.491 82.848 1.00107.50 C
ATOM 19 N4 C A 72 21.201 109.090 81.645 1.00107.17 N
ATOM 20 C5 C A 72 20.676 109.811 83.864 1.00107.42 C
ATOM 21 C6 C A 72 21.158 110.205 85.050 1.00107.56 C
TER
ATOM 1 O3' G B 10 28.573 106.821 72.336 1.00113.60 O
ATOM 2 P G B 11 28.845 105.732 73.492 1.00113.78 P
ATOM 3 OP1 G B 11 30.071 104.967 73.134 1.00114.20 O
ATOM 4 OP2 G B 11 27.573 105.006 73.747 1.00113.76 O
ATOM 5 O5' G B 11 29.162 106.612 74.781 1.00113.05 O
ATOM 6 C5' G B 11 30.316 107.444 74.822 1.00112.02 C
ATOM 7 C4' G B 11 30.462 108.074 76.185 1.00111.34 C
ATOM 8 O4' G B 11 29.404 109.039 76.411 1.00109.54 O
ATOM 9 C3' G B 11 30.373 107.122 77.364 1.00111.84 C
ATOM 10 O3' G B 11 31.618 106.473 77.601 1.00114.93 O
ATOM 11 C2' G B 11 29.962 108.050 78.502 1.00110.00 C
ATOM 12 O2' G B 11 31.056 108.757 79.048 1.00109.89 O
ATOM 13 C1' G B 11 29.052 109.047 77.783 1.00107.45 C
ATOM 14 N9 G B 11 27.642 108.698 77.895 1.00103.23 N
ATOM 15 C8 G B 11 26.841 108.176 76.911 1.00101.94 C
ATOM 16 N7 G B 11 25.618 107.960 77.307 1.00100.95 N
ATOM 17 C5 G B 11 25.609 108.363 78.635 1.00100.17 C
ATOM 18 C6 G B 11 24.560 108.361 79.588 1.00 99.76 C
ATOM 19 O6 G B 11 23.385 108.002 79.442 1.00 99.20 O
ATOM 20 N1 G B 11 24.988 108.843 80.819 1.00 99.43 N
ATOM 21 C2 G B 11 26.260 109.279 81.098 1.00 99.92 C
ATOM 22 N2 G B 11 26.477 109.703 82.351 1.00 99.42 N
ATOM 23 N3 G B 11 27.245 109.295 80.215 1.00100.35 N
ATOM 24 C4 G B 11 26.851 108.823 79.013 1.00101.04 C
ATOM 25 P U B 12 31.643 105.060 78.373 1.00117.49 P
ATOM 26 OP1 U B 12 32.966 104.408 78.151 1.00117.63 O
ATOM 27 OP2 U B 12 30.391 104.340 78.001 1.00116.91 O
ATOM 28 O5' U B 12 31.527 105.463 79.911 1.00117.29 O
TER
ATOM 2 P C A 72 18.147 111.074 88.589 1.00106.54 P
ATOM 3 OP1 C A 72 17.277 111.891 89.474 1.00105.55 O
ATOM 4 OP2 C A 72 17.935 111.101 87.119 1.00106.12 O
ATOM 5 O5' C A 72 19.668 111.459 88.868 1.00106.81 O
ATOM 6 C5' C A 72 20.311 112.487 88.118 1.00106.73 C
ATOM 7 C4' C A 72 21.778 112.170 87.945 1.00106.21 C
ATOM 8 O4' C A 72 21.925 110.811 87.468 1.00106.42 O
ATOM 9 C3' C A 72 22.510 113.011 86.912 1.00105.95 C
ATOM 10 O3' C A 72 22.743 114.385 87.208 1.00105.66 O
ATOM 11 C2' C A 72 23.677 112.119 86.518 1.00106.25 C
ATOM 12 O2' C A 72 24.738 112.173 87.452 1.00105.92 O
ATOM 13 C1' C A 72 23.025 110.735 86.575 1.00106.75 C
ATOM 14 N1 C A 72 22.505 110.297 85.270 1.00107.64 N
ATOM 15 C2 C A 72 23.414 109.978 84.257 1.00107.95 C
ATOM 16 O2 C A 72 24.634 110.068 84.488 1.00107.20 O
ATOM 17 N3 C A 72 22.939 109.579 83.051 1.00107.92 N
ATOM 18 C4 C A 72 21.621 109.491 82.848 1.00107.50 C
ATOM 19 N4 C A 72 21.201 109.090 81.645 1.00107.17 N
ATOM 20 C5 C A 72 20.676 109.811 83.864 1.00107.42 C
ATOM 21 C6 C A 72 21.158 110.205 85.050 1.00107.56 C
TER
ATOM 1 O3' G B 10 28.573 106.821 72.336 1.00113.60 O
ATOM 2 P G B 11 28.845 105.732 73.492 1.00113.78 P
ATOM 3 OP1 G B 11 30.071 104.967 73.134 1.00114.20 O
ATOM 4 OP2 G B 11 27.573 105.006 73.747 1.00113.76 O
ATOM 5 O5' G B 11 29.162 106.612 74.781 1.00113.05 O
ATOM 6 C5' G B 11 30.316 107.444 74.822 1.00112.02 C
ATOM 7 C4' G B 11 30.462 108.074 76.185 1.00111.34 C
ATOM 8 O4' G B 11 29.404 109.039 76.411 1.00109.54 O
ATOM 9 C3' G B 11 30.373 107.122 77.364 1.00111.84 C
ATOM 10 O3' G B 11 31.618 106.473 77.601 1.00114.93 O
ATOM 11 C2' G B 11 29.962 108.050 78.502 1.00110.00 C
ATOM 12 O2' G B 11 31.056 108.757 79.048 1.00109.89 O
ATOM 13 C1' G B 11 29.052 109.047 77.783 1.00107.45 C
ATOM 14 N9 G B 11 27.642 108.698 77.895 1.00103.23 N
ATOM 15 C8 G B 11 26.841 108.176 76.911 1.00101.94 C
ATOM 16 N7 G B 11 25.618 107.960 77.307 1.00100.95 N
ATOM 17 C5 G B 11 25.609 108.363 78.635 1.00100.17 C
ATOM 18 C6 G B 11 24.560 108.361 79.588 1.00 99.76 C
ATOM 19 O6 G B 11 23.385 108.002 79.442 1.00 99.20 O
ATOM 20 N1 G B 11 24.988 108.843 80.819 1.00 99.43 N
ATOM 21 C2 G B 11 26.260 109.279 81.098 1.00 99.92 C
ATOM 22 N2 G B 11 26.477 109.703 82.351 1.00 99.42 N
ATOM 23 N3 G B 11 27.245 109.295 80.215 1.00100.35 N
ATOM 24 C4 G B 11 26.851 108.823 79.013 1.00101.04 C
ATOM 25 P U B 12 31.643 105.060 78.373 1.00117.49 P
ATOM 26 OP1 U B 12 32.966 104.408 78.151 1.00117.63 O
ATOM 27 OP2 U B 12 30.391 104.340 78.001 1.00116.91 O
ATOM 28 O5' U B 12 31.527 105.463 79.911 1.00117.29 O
TER
Atoms:
C2: (23.414,109.978,84.257)
OP1: (17.277,111.891,89.474)
OP2: (17.935,111.101,87.119)
C4: (21.621,109.491,82.848)
O5': (19.668,111.459,88.868)
C3': (22.510,113.011,86.912)
C1': (23.025,110.735,86.575)
O4': (21.925,110.811,87.468)
C5': (20.311,112.487,88.118)
P: (18.147,111.074,88.589)
O2: (24.634,110.068,84.488)
C4': (21.778,112.170,87.945)
C2': (23.677,112.119,86.518)
O2': (24.738,112.173,87.452)
N1: (22.505,110.297,85.270)
N3: (22.939,109.579,83.051)
N4: (21.201,109.090,81.645)
C6: (21.158,110.205,85.050)
C5: (20.676,109.811,83.864)
O3': (22.743,114.385,87.208)
OP1: (17.277,111.891,89.474)
OP2: (17.935,111.101,87.119)
C4: (21.621,109.491,82.848)
O5': (19.668,111.459,88.868)
C3': (22.510,113.011,86.912)
C1': (23.025,110.735,86.575)
O4': (21.925,110.811,87.468)
C5': (20.311,112.487,88.118)
P: (18.147,111.074,88.589)
O2: (24.634,110.068,84.488)
C4': (21.778,112.170,87.945)
C2': (23.677,112.119,86.518)
O2': (24.738,112.173,87.452)
N1: (22.505,110.297,85.270)
N3: (22.939,109.579,83.051)
N4: (21.201,109.090,81.645)
C6: (21.158,110.205,85.050)
C5: (20.676,109.811,83.864)
O3': (22.743,114.385,87.208)
OP1: (30.071,104.967,73.134)
OP2: (27.573,105.006,73.747)
C3': (30.373,107.122,77.364)
C1': (29.052,109.047,77.783)
C5': (30.316,107.444,74.822)
O6: (23.385,108.002,79.442)
O4': (29.404,109.039,76.411)
C8: (26.841,108.176,76.911)
C2: (26.260,109.279,81.098)
C6: (24.560,108.361,79.588)
C5: (25.609,108.363,78.635)
C4: (26.851,108.823,79.013)
P: (28.845,105.732,73.492)
C4': (30.462,108.074,76.185)
C2': (29.962,108.050,78.502)
O2': (31.056,108.757,79.048)
N1: (24.988,108.843,80.819)
N2: (26.477,109.703,82.351)
N3: (27.245,109.295,80.215)
N7: (25.618,107.960,77.307)
N9: (27.642,108.698,77.895)
O5': (29.162,106.612,74.781)
O3': (31.618,106.473,77.601)
OP2: (27.573,105.006,73.747)
C3': (30.373,107.122,77.364)
C1': (29.052,109.047,77.783)
C5': (30.316,107.444,74.822)
O6: (23.385,108.002,79.442)
O4': (29.404,109.039,76.411)
C8: (26.841,108.176,76.911)
C2: (26.260,109.279,81.098)
C6: (24.560,108.361,79.588)
C5: (25.609,108.363,78.635)
C4: (26.851,108.823,79.013)
P: (28.845,105.732,73.492)
C4': (30.462,108.074,76.185)
C2': (29.962,108.050,78.502)
O2': (31.056,108.757,79.048)
N1: (24.988,108.843,80.819)
N2: (26.477,109.703,82.351)
N3: (27.245,109.295,80.215)
N7: (25.618,107.960,77.307)
N9: (27.642,108.698,77.895)
O5': (29.162,106.612,74.781)
O3': (31.618,106.473,77.601)
Image (generated by PyMOL):