Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0609:0622
Extra
PDB:
ATOM 1 O3' A A 608 34.508 116.546 91.910 1.00 25.65 O
ATOM 2 P C A 609 35.016 115.363 90.942 1.00 26.85 P
ATOM 3 OP1 C A 609 33.846 114.494 90.661 1.00 28.34 O
ATOM 4 OP2 C A 609 36.234 114.766 91.526 1.00 29.90 O
ATOM 5 O5' C A 609 35.450 116.083 89.589 1.00 27.06 O
ATOM 6 C5' C A 609 34.469 116.603 88.674 1.00 28.50 C
ATOM 7 C4' C A 609 35.142 117.241 87.481 1.00 28.80 C
ATOM 8 O4' C A 609 35.862 118.436 87.876 1.00 30.37 O
ATOM 9 C3' C A 609 36.185 116.395 86.783 1.00 28.01 C
ATOM 10 O3' C A 609 35.561 115.501 85.879 1.00 29.85 O
ATOM 11 C2' C A 609 36.996 117.449 86.053 1.00 28.54 C
ATOM 12 O2' C A 609 36.301 117.931 84.926 1.00 29.14 O
ATOM 13 C1' C A 609 37.029 118.573 87.088 1.00 29.89 C
ATOM 14 N1 C A 609 38.204 118.532 87.983 1.00 33.90 N
ATOM 15 C2 C A 609 39.379 119.251 87.629 1.00 34.41 C
ATOM 16 O2 C A 609 39.409 119.887 86.562 1.00 32.45 O
ATOM 17 N3 C A 609 40.445 119.224 88.469 1.00 34.48 N
ATOM 18 C4 C A 609 40.383 118.528 89.610 1.00 33.86 C
ATOM 19 N4 C A 609 41.446 118.544 90.415 1.00 32.05 N
ATOM 20 C5 C A 609 39.219 117.785 89.981 1.00 35.94 C
ATOM 21 C6 C A 609 38.166 117.814 89.149 1.00 34.51 C
ATOM 22 P G A 610 36.049 113.979 85.803 1.00 30.79 P
ATOM 23 OP1 G A 610 35.133 113.262 84.876 1.00 27.89 O
ATOM 24 OP2 G A 610 36.214 113.503 87.198 1.00 30.50 O
ATOM 25 O5' G A 610 37.475 114.069 85.101 1.00 29.88 O
TER
ATOM 1 O3' C B 621 52.225 121.213 87.759 1.00 28.48 O
ATOM 2 P G B 622 51.590 122.684 87.768 1.00 31.52 P
ATOM 3 OP1 G B 622 52.598 123.620 87.213 1.00 31.70 O
ATOM 4 OP2 G B 622 51.018 122.931 89.109 1.00 31.02 O
ATOM 5 O5' G B 622 50.388 122.577 86.737 1.00 30.26 O
ATOM 6 C5' G B 622 50.634 122.203 85.376 1.00 31.86 C
ATOM 7 C4' G B 622 49.381 122.361 84.559 1.00 32.12 C
ATOM 8 O4' G B 622 48.462 121.265 84.800 1.00 32.27 O
ATOM 9 C3' G B 622 48.577 123.606 84.860 1.00 30.41 C
ATOM 10 O3' G B 622 49.138 124.714 84.180 1.00 32.70 O
ATOM 11 C2' G B 622 47.211 123.214 84.329 1.00 31.09 C
ATOM 12 O2' G B 622 47.216 123.232 82.921 1.00 29.14 O
ATOM 13 C1' G B 622 47.129 121.749 84.765 1.00 31.90 C
ATOM 14 N9 G B 622 46.536 121.528 86.084 1.00 33.01 N
ATOM 15 C8 G B 622 47.172 121.671 87.296 1.00 34.35 C
ATOM 16 N7 G B 622 46.419 121.362 88.313 1.00 33.63 N
ATOM 17 C5 G B 622 45.205 121.001 87.746 1.00 35.73 C
ATOM 18 C6 G B 622 44.002 120.567 88.361 1.00 36.45 C
ATOM 19 O6 G B 622 43.771 120.404 89.564 1.00 38.78 O
ATOM 20 N1 G B 622 43.007 120.315 87.423 1.00 34.19 N
ATOM 21 C2 G B 622 43.146 120.463 86.072 1.00 33.17 C
ATOM 22 N2 G B 622 42.062 120.186 85.353 1.00 30.83 N
ATOM 23 N3 G B 622 44.266 120.859 85.477 1.00 34.32 N
ATOM 24 C4 G B 622 45.251 121.110 86.371 1.00 33.86 C
ATOM 25 P A B 623 48.933 126.195 84.759 1.00 35.42 P
ATOM 26 OP1 A B 623 49.838 127.083 84.005 1.00 35.01 O
ATOM 27 OP2 A B 623 48.983 126.180 86.245 1.00 35.51 O
ATOM 28 O5' A B 623 47.449 126.568 84.341 1.00 35.17 O
TER
ATOM 2 P C A 609 35.016 115.363 90.942 1.00 26.85 P
ATOM 3 OP1 C A 609 33.846 114.494 90.661 1.00 28.34 O
ATOM 4 OP2 C A 609 36.234 114.766 91.526 1.00 29.90 O
ATOM 5 O5' C A 609 35.450 116.083 89.589 1.00 27.06 O
ATOM 6 C5' C A 609 34.469 116.603 88.674 1.00 28.50 C
ATOM 7 C4' C A 609 35.142 117.241 87.481 1.00 28.80 C
ATOM 8 O4' C A 609 35.862 118.436 87.876 1.00 30.37 O
ATOM 9 C3' C A 609 36.185 116.395 86.783 1.00 28.01 C
ATOM 10 O3' C A 609 35.561 115.501 85.879 1.00 29.85 O
ATOM 11 C2' C A 609 36.996 117.449 86.053 1.00 28.54 C
ATOM 12 O2' C A 609 36.301 117.931 84.926 1.00 29.14 O
ATOM 13 C1' C A 609 37.029 118.573 87.088 1.00 29.89 C
ATOM 14 N1 C A 609 38.204 118.532 87.983 1.00 33.90 N
ATOM 15 C2 C A 609 39.379 119.251 87.629 1.00 34.41 C
ATOM 16 O2 C A 609 39.409 119.887 86.562 1.00 32.45 O
ATOM 17 N3 C A 609 40.445 119.224 88.469 1.00 34.48 N
ATOM 18 C4 C A 609 40.383 118.528 89.610 1.00 33.86 C
ATOM 19 N4 C A 609 41.446 118.544 90.415 1.00 32.05 N
ATOM 20 C5 C A 609 39.219 117.785 89.981 1.00 35.94 C
ATOM 21 C6 C A 609 38.166 117.814 89.149 1.00 34.51 C
ATOM 22 P G A 610 36.049 113.979 85.803 1.00 30.79 P
ATOM 23 OP1 G A 610 35.133 113.262 84.876 1.00 27.89 O
ATOM 24 OP2 G A 610 36.214 113.503 87.198 1.00 30.50 O
ATOM 25 O5' G A 610 37.475 114.069 85.101 1.00 29.88 O
TER
ATOM 1 O3' C B 621 52.225 121.213 87.759 1.00 28.48 O
ATOM 2 P G B 622 51.590 122.684 87.768 1.00 31.52 P
ATOM 3 OP1 G B 622 52.598 123.620 87.213 1.00 31.70 O
ATOM 4 OP2 G B 622 51.018 122.931 89.109 1.00 31.02 O
ATOM 5 O5' G B 622 50.388 122.577 86.737 1.00 30.26 O
ATOM 6 C5' G B 622 50.634 122.203 85.376 1.00 31.86 C
ATOM 7 C4' G B 622 49.381 122.361 84.559 1.00 32.12 C
ATOM 8 O4' G B 622 48.462 121.265 84.800 1.00 32.27 O
ATOM 9 C3' G B 622 48.577 123.606 84.860 1.00 30.41 C
ATOM 10 O3' G B 622 49.138 124.714 84.180 1.00 32.70 O
ATOM 11 C2' G B 622 47.211 123.214 84.329 1.00 31.09 C
ATOM 12 O2' G B 622 47.216 123.232 82.921 1.00 29.14 O
ATOM 13 C1' G B 622 47.129 121.749 84.765 1.00 31.90 C
ATOM 14 N9 G B 622 46.536 121.528 86.084 1.00 33.01 N
ATOM 15 C8 G B 622 47.172 121.671 87.296 1.00 34.35 C
ATOM 16 N7 G B 622 46.419 121.362 88.313 1.00 33.63 N
ATOM 17 C5 G B 622 45.205 121.001 87.746 1.00 35.73 C
ATOM 18 C6 G B 622 44.002 120.567 88.361 1.00 36.45 C
ATOM 19 O6 G B 622 43.771 120.404 89.564 1.00 38.78 O
ATOM 20 N1 G B 622 43.007 120.315 87.423 1.00 34.19 N
ATOM 21 C2 G B 622 43.146 120.463 86.072 1.00 33.17 C
ATOM 22 N2 G B 622 42.062 120.186 85.353 1.00 30.83 N
ATOM 23 N3 G B 622 44.266 120.859 85.477 1.00 34.32 N
ATOM 24 C4 G B 622 45.251 121.110 86.371 1.00 33.86 C
ATOM 25 P A B 623 48.933 126.195 84.759 1.00 35.42 P
ATOM 26 OP1 A B 623 49.838 127.083 84.005 1.00 35.01 O
ATOM 27 OP2 A B 623 48.983 126.180 86.245 1.00 35.51 O
ATOM 28 O5' A B 623 47.449 126.568 84.341 1.00 35.17 O
TER
Atoms:
C2: (39.379,119.251,87.629)
OP1: (33.846,114.494,90.661)
OP2: (36.234,114.766,91.526)
C4: (40.383,118.528,89.610)
O5': (35.450,116.083,89.589)
C3': (36.185,116.395,86.783)
C1': (37.029,118.573,87.088)
O4': (35.862,118.436,87.876)
C5': (34.469,116.603,88.674)
P: (35.016,115.363,90.942)
O2: (39.409,119.887,86.562)
C4': (35.142,117.241,87.481)
C2': (36.996,117.449,86.053)
O2': (36.301,117.931,84.926)
N1: (38.204,118.532,87.983)
N3: (40.445,119.224,88.469)
N4: (41.446,118.544,90.415)
C6: (38.166,117.814,89.149)
C5: (39.219,117.785,89.981)
O3': (35.561,115.501,85.879)
OP1: (33.846,114.494,90.661)
OP2: (36.234,114.766,91.526)
C4: (40.383,118.528,89.610)
O5': (35.450,116.083,89.589)
C3': (36.185,116.395,86.783)
C1': (37.029,118.573,87.088)
O4': (35.862,118.436,87.876)
C5': (34.469,116.603,88.674)
P: (35.016,115.363,90.942)
O2: (39.409,119.887,86.562)
C4': (35.142,117.241,87.481)
C2': (36.996,117.449,86.053)
O2': (36.301,117.931,84.926)
N1: (38.204,118.532,87.983)
N3: (40.445,119.224,88.469)
N4: (41.446,118.544,90.415)
C6: (38.166,117.814,89.149)
C5: (39.219,117.785,89.981)
O3': (35.561,115.501,85.879)
OP1: (52.598,123.620,87.213)
OP2: (51.018,122.931,89.109)
C3': (48.577,123.606,84.860)
C1': (47.129,121.749,84.765)
C5': (50.634,122.203,85.376)
O6: (43.771,120.404,89.564)
O4': (48.462,121.265,84.800)
C8: (47.172,121.671,87.296)
C2: (43.146,120.463,86.072)
C6: (44.002,120.567,88.361)
C5: (45.205,121.001,87.746)
C4: (45.251,121.110,86.371)
P: (51.590,122.684,87.768)
C4': (49.381,122.361,84.559)
C2': (47.211,123.214,84.329)
O2': (47.216,123.232,82.921)
N1: (43.007,120.315,87.423)
N2: (42.062,120.186,85.353)
N3: (44.266,120.859,85.477)
N7: (46.419,121.362,88.313)
N9: (46.536,121.528,86.084)
O5': (50.388,122.577,86.737)
O3': (49.138,124.714,84.180)
OP2: (51.018,122.931,89.109)
C3': (48.577,123.606,84.860)
C1': (47.129,121.749,84.765)
C5': (50.634,122.203,85.376)
O6: (43.771,120.404,89.564)
O4': (48.462,121.265,84.800)
C8: (47.172,121.671,87.296)
C2: (43.146,120.463,86.072)
C6: (44.002,120.567,88.361)
C5: (45.205,121.001,87.746)
C4: (45.251,121.110,86.371)
P: (51.590,122.684,87.768)
C4': (49.381,122.361,84.559)
C2': (47.211,123.214,84.329)
O2': (47.216,123.232,82.921)
N1: (43.007,120.315,87.423)
N2: (42.062,120.186,85.353)
N3: (44.266,120.859,85.477)
N7: (46.419,121.362,88.313)
N9: (46.536,121.528,86.084)
O5': (50.388,122.577,86.737)
O3': (49.138,124.714,84.180)
Image (generated by PyMOL):