ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01921:01951

Extra

PDB:
ATOM 1 O3' G A1920 117.035 123.938 106.890 1.00 59.49 O
ATOM 2 P C A1921 116.326 124.005 108.330 1.00 59.94 P
ATOM 3 OP1 C A1921 116.487 125.383 108.862 1.00 58.86 O
ATOM 4 OP2 C A1921 116.787 122.847 109.139 1.00 59.52 O
ATOM 5 O5' C A1921 114.782 123.792 107.998 1.00 61.35 O
ATOM 6 C5' C A1921 114.066 124.743 107.185 1.00 61.97 C
ATOM 7 C4' C A1921 112.794 124.131 106.653 1.00 61.35 C
ATOM 8 O4' C A1921 113.122 122.966 105.848 1.00 62.03 O
ATOM 9 C3' C A1921 111.830 123.578 107.689 1.00 60.70 C
ATOM 10 O3' C A1921 111.044 124.589 108.304 1.00 58.71 O
ATOM 11 C2' C A1921 111.005 122.608 106.854 1.00 61.27 C
ATOM 12 O2' C A1921 110.069 123.238 106.011 1.00 60.35 O
ATOM 13 C1' C A1921 112.085 122.001 105.964 1.00 62.09 C
ATOM 14 N1 C A1921 112.627 120.766 106.552 1.00 64.10 N
ATOM 15 C2 C A1921 111.837 119.612 106.520 1.00 66.16 C
ATOM 16 O2 C A1921 110.724 119.664 105.980 1.00 67.80 O
ATOM 17 N3 C A1921 112.304 118.474 107.076 1.00 66.13 N
ATOM 18 C4 C A1921 113.507 118.457 107.641 1.00 65.30 C
ATOM 19 N4 C A1921 113.920 117.318 108.183 1.00 65.64 N
ATOM 20 C5 C A1921 114.340 119.611 107.678 1.00 65.27 C
ATOM 21 C6 C A1921 113.866 120.734 107.127 1.00 64.58 C
ATOM 22 P G A1922 110.568 124.401 109.830 1.00 59.39 P
ATOM 23 OP1 G A1922 109.794 125.606 110.228 1.00 59.69 O
ATOM 24 OP2 G A1922 111.742 123.986 110.644 1.00 59.84 O
ATOM 25 O5' G A1922 109.561 123.171 109.776 1.00 58.74 O
TER

ATOM 1 O3' U B1950 106.873 109.772 111.709 1.00 87.62 O
ATOM 2 P G B1951 105.270 109.741 111.656 1.00 85.95 P
ATOM 3 OP1 G B1951 104.738 109.030 112.852 1.00 85.47 O
ATOM 4 OP2 G B1951 104.930 109.242 110.295 1.00 86.40 O
ATOM 5 O5' G B1951 104.840 111.271 111.805 1.00 80.53 O
ATOM 6 C5' G B1951 105.673 112.325 111.301 1.00 70.34 C
ATOM 7 C4' G B1951 105.024 112.982 110.105 1.00 62.98 C
ATOM 8 O4' G B1951 105.965 113.924 109.534 1.00 61.11 O
ATOM 9 C3' G B1951 104.666 112.046 108.958 1.00 59.54 C
ATOM 10 O3' G B1951 103.654 112.636 108.145 1.00 58.48 O
ATOM 11 C2' G B1951 105.979 111.974 108.190 1.00 57.54 C
ATOM 12 O2' G B1951 105.803 111.644 106.833 1.00 54.94 O
ATOM 13 C1' G B1951 106.500 113.403 108.334 1.00 58.87 C
ATOM 14 N9 G B1951 107.952 113.523 108.412 1.00 59.94 N
ATOM 15 C8 G B1951 108.848 112.603 108.902 1.00 60.25 C
ATOM 16 N7 G B1951 110.082 113.020 108.863 1.00 60.42 N
ATOM 17 C5 G B1951 109.998 114.287 108.308 1.00 61.16 C
ATOM 18 C6 G B1951 111.010 115.227 108.020 1.00 61.79 C
ATOM 19 O6 G B1951 112.226 115.124 108.200 1.00 63.97 O
ATOM 20 N1 G B1951 110.485 116.388 107.464 1.00 61.08 N
ATOM 21 C2 G B1951 109.158 116.612 107.220 1.00 59.91 C
ATOM 22 N2 G B1951 108.845 117.792 106.690 1.00 59.76 N
ATOM 23 N3 G B1951 108.206 115.743 107.479 1.00 60.30 N
ATOM 24 C4 G B1951 108.692 114.610 108.020 1.00 60.73 C
ATOM 25 P C B1952 102.101 112.366 108.456 1.00 56.97 P
ATOM 26 OP1 C B1952 101.343 113.293 107.588 1.00 56.40 O
ATOM 27 OP2 C B1952 101.915 112.426 109.924 1.00 57.57 O
ATOM 28 O5' C B1952 101.818 110.876 107.954 1.00 58.73 O
TER

Atoms:
C2: (111.837,119.612,106.520)
OP1: (116.487,125.383,108.862)
OP2: (116.787,122.847,109.139)
C4: (113.507,118.457,107.641)
O5': (114.782,123.792,107.998)
C3': (111.830,123.578,107.689)
C1': (112.085,122.001,105.964)
O4': (113.122,122.966,105.848)
C5': (114.066,124.743,107.185)
P: (116.326,124.005,108.330)
O2: (110.724,119.664,105.980)
C4': (112.794,124.131,106.653)
C2': (111.005,122.608,106.854)
O2': (110.069,123.238,106.011)
N1: (112.627,120.766,106.552)
N3: (112.304,118.474,107.076)
N4: (113.920,117.318,108.183)
C6: (113.866,120.734,107.127)
C5: (114.340,119.611,107.678)
O3': (111.044,124.589,108.304)
OP1: (104.738,109.030,112.852)
OP2: (104.930,109.242,110.295)
C3': (104.666,112.046,108.958)
C1': (106.500,113.403,108.334)
C5': (105.673,112.325,111.301)
O6: (112.226,115.124,108.200)
O4': (105.965,113.924,109.534)
C8: (108.848,112.603,108.902)
C2: (109.158,116.612,107.220)
C6: (111.010,115.227,108.020)
C5: (109.998,114.287,108.308)
C4: (108.692,114.610,108.020)
P: (105.270,109.741,111.656)
C4': (105.024,112.982,110.105)
C2': (105.979,111.974,108.190)
O2': (105.803,111.644,106.833)
N1: (110.485,116.388,107.464)
N2: (108.845,117.792,106.690)
N3: (108.206,115.743,107.479)
N7: (110.082,113.020,108.863)
N9: (107.952,113.523,108.412)
O5': (104.840,111.271,111.805)
O3': (103.654,112.636,108.145)
Image (generated by PyMOL):
PyMOL image
show in jmol