ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1C9S:W22:W23

Extra

PDB:
ATOM 1 O3' A A 21 28.216 0.960 37.476 1.00 73.30 O
ATOM 2 P U A 22 29.648 0.362 37.903 1.00 73.27 P
ATOM 3 OP1 U A 22 29.396 -0.887 38.673 1.00 74.18 O
ATOM 4 OP2 U A 22 30.427 1.368 38.678 1.00 73.58 O
ATOM 5 O5' U A 22 30.485 0.017 36.590 1.00 74.24 O
ATOM 6 C5' U A 22 30.004 -1.022 35.719 1.00 77.94 C
ATOM 7 C4' U A 22 30.971 -1.223 34.569 1.00 80.35 C
ATOM 8 O4' U A 22 31.165 0.037 33.870 1.00 81.81 O
ATOM 9 C3' U A 22 32.374 -1.724 34.924 1.00 80.01 C
ATOM 10 O3' U A 22 32.695 -2.791 34.042 1.00 78.29 O
ATOM 11 C2' U A 22 33.299 -0.520 34.752 1.00 81.20 C
ATOM 12 O2' U A 22 34.648 -0.812 34.371 1.00 82.07 O
ATOM 13 C1' U A 22 32.566 0.280 33.683 1.00 82.43 C
ATOM 14 N1 U A 22 32.711 1.763 33.616 1.00 84.14 N
ATOM 15 C2 U A 22 32.821 2.346 32.375 1.00 84.18 C
ATOM 16 O2 U A 22 32.828 1.708 31.339 1.00 83.33 O
ATOM 17 N3 U A 22 32.920 3.720 32.298 1.00 84.25 N
ATOM 18 C4 U A 22 32.897 4.540 33.404 1.00 84.55 C
ATOM 19 O4 U A 22 33.003 5.752 33.209 1.00 84.94 O
ATOM 20 C5 U A 22 32.759 3.873 34.674 1.00 85.00 C
ATOM 21 C6 U A 22 32.666 2.535 34.751 1.00 84.68 C
ATOM 22 P G A 23 33.844 -3.801 34.540 1.00 79.11 P
ATOM 23 OP1 G A 23 34.096 -3.550 35.990 1.00 78.78 O
ATOM 24 OP2 G A 23 35.016 -3.525 33.671 1.00 78.64 O
ATOM 25 O5' G A 23 33.311 -5.271 34.317 1.00 76.28 O
TER

ATOM 1 O3' U B 22 32.695 -2.791 34.042 1.00 78.29 O
ATOM 2 P G B 23 33.844 -3.801 34.540 1.00 79.11 P
ATOM 3 OP1 G B 23 34.096 -3.550 35.990 1.00 78.78 O
ATOM 4 OP2 G B 23 35.016 -3.525 33.671 1.00 78.64 O
ATOM 5 O5' G B 23 33.311 -5.271 34.317 1.00 76.28 O
ATOM 6 C5' G B 23 31.959 -5.571 33.925 1.00 66.06 C
ATOM 7 C4' G B 23 32.136 -6.909 33.209 1.00 60.29 C
ATOM 8 O4' G B 23 32.000 -6.589 31.793 1.00 56.22 O
ATOM 9 C3' G B 23 33.529 -7.526 33.391 1.00 57.81 C
ATOM 10 O3' G B 23 33.379 -8.936 33.416 1.00 57.54 O
ATOM 11 C2' G B 23 34.281 -7.114 32.127 1.00 56.77 C
ATOM 12 O2' G B 23 35.173 -8.158 31.729 1.00 60.21 O
ATOM 13 C1' G B 23 33.145 -7.013 31.097 1.00 53.65 C
ATOM 14 N9 G B 23 33.463 -6.064 30.001 1.00 50.05 N
ATOM 15 C8 G B 23 33.987 -4.794 30.031 1.00 49.94 C
ATOM 16 N7 G B 23 34.180 -4.270 28.840 1.00 49.61 N
ATOM 17 C5 G B 23 33.771 -5.265 27.956 1.00 50.07 C
ATOM 18 C6 G B 23 33.747 -5.307 26.533 1.00 51.26 C
ATOM 19 O6 G B 23 34.089 -4.449 25.725 1.00 57.66 O
ATOM 20 N1 G B 23 33.245 -6.525 26.046 1.00 46.51 N
ATOM 21 C2 G B 23 32.826 -7.563 26.852 1.00 46.44 C
ATOM 22 N2 G B 23 32.354 -8.671 26.273 1.00 45.72 N
ATOM 23 N3 G B 23 32.842 -7.529 28.185 1.00 43.65 N
ATOM 24 C4 G B 23 33.336 -6.362 28.662 1.00 47.77 C
ATOM 25 P A B 24 33.652 -9.780 34.756 1.00 57.50 P
ATOM 26 OP1 A B 24 34.758 -9.145 35.512 1.00 58.48 O
ATOM 27 OP2 A B 24 33.826 -11.200 34.353 1.00 58.57 O
ATOM 28 O5' A B 24 32.291 -9.645 35.594 1.00 56.04 O
TER

Atoms:
C4: (32.897,4.540,33.404)
N3: (32.920,3.720,32.298)
OP1: (29.396,-0.887,38.673)
OP2: (30.427,1.368,38.678)
C2: (32.821,2.346,32.375)
C1': (32.566,0.280,33.683)
C3': (32.374,-1.724,34.924)
O5': (30.485,0.017,36.590)
O4': (31.165,0.037,33.870)
C5': (30.004,-1.022,35.719)
P: (29.648,0.362,37.903)
C4': (30.971,-1.223,34.569)
C2': (33.299,-0.520,34.752)
O2': (34.648,-0.812,34.371)
N1: (32.711,1.763,33.616)
O4: (33.003,5.752,33.209)
O2: (32.828,1.708,31.339)
C6: (32.666,2.535,34.751)
C5: (32.759,3.873,34.674)
O3': (32.695,-2.791,34.042)
OP1: (34.096,-3.550,35.990)
OP2: (35.016,-3.525,33.671)
C3': (33.529,-7.526,33.391)
C1': (33.145,-7.013,31.097)
C5': (31.959,-5.571,33.925)
O6: (34.089,-4.449,25.725)
O4': (32.000,-6.589,31.793)
C8: (33.987,-4.794,30.031)
C2: (32.826,-7.563,26.852)
C6: (33.747,-5.307,26.533)
C5: (33.771,-5.265,27.956)
C4: (33.336,-6.362,28.662)
P: (33.844,-3.801,34.540)
C4': (32.136,-6.909,33.209)
C2': (34.281,-7.114,32.127)
O2': (35.173,-8.158,31.729)
N1: (33.245,-6.525,26.046)
N2: (32.354,-8.671,26.273)
N3: (32.842,-7.529,28.185)
N7: (34.180,-4.270,28.840)
N9: (33.463,-6.064,30.001)
O5': (33.311,-5.271,34.317)
O3': (33.379,-8.936,33.416)
Image (generated by PyMOL):
PyMOL image
show in jmol