Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X20:X21
Extra
PDB:
ATOM 1 O3' A A 19 9.408 -12.816 51.015 1.00 43.81 O
ATOM 2 P U A 20 9.616 -12.072 52.419 1.00 43.52 P
ATOM 3 OP1 U A 20 10.246 -13.035 53.350 1.00 43.75 O
ATOM 4 OP2 U A 20 8.350 -11.407 52.800 1.00 43.38 O
ATOM 5 O5' U A 20 10.689 -10.943 52.069 1.00 43.81 O
ATOM 6 C5' U A 20 11.954 -11.284 51.514 1.00 44.53 C
ATOM 7 C4' U A 20 12.545 -10.083 50.803 1.00 45.22 C
ATOM 8 O4' U A 20 11.528 -9.466 49.971 1.00 45.84 O
ATOM 9 C3' U A 20 13.074 -8.994 51.730 1.00 45.41 C
ATOM 10 O3' U A 20 14.373 -8.607 51.321 1.00 45.46 O
ATOM 11 C2' U A 20 12.081 -7.845 51.577 1.00 45.71 C
ATOM 12 O2' U A 20 12.701 -6.577 51.663 1.00 45.80 O
ATOM 13 C1' U A 20 11.529 -8.070 50.173 1.00 46.24 C
ATOM 14 N1 U A 20 10.146 -7.508 50.015 1.00 46.57 N
ATOM 15 C2 U A 20 9.988 -6.299 49.356 1.00 46.65 C
ATOM 16 O2 U A 20 10.912 -5.664 48.878 1.00 46.63 O
ATOM 17 N3 U A 20 8.689 -5.852 49.270 1.00 46.79 N
ATOM 18 C4 U A 20 7.558 -6.474 49.772 1.00 46.64 C
ATOM 19 O4 U A 20 6.460 -5.950 49.612 1.00 46.64 O
ATOM 20 C5 U A 20 7.799 -7.727 50.448 1.00 46.66 C
ATOM 21 C6 U A 20 9.056 -8.185 50.544 1.00 46.65 C
ATOM 22 P A A 21 15.631 -8.890 52.266 1.00 45.45 P
ATOM 23 OP1 A A 21 15.746 -10.352 52.462 1.00 45.81 O
ATOM 24 OP2 A A 21 15.559 -7.994 53.440 1.00 45.34 O
ATOM 25 O5' A A 21 16.838 -8.417 51.335 1.00 45.56 O
TER
ATOM 1 O3' U B 20 14.373 -8.607 51.321 1.00 45.46 O
ATOM 2 P A B 21 15.631 -8.890 52.266 1.00 45.45 P
ATOM 3 OP1 A B 21 15.746 -10.352 52.462 1.00 45.81 O
ATOM 4 OP2 A B 21 15.559 -7.994 53.440 1.00 45.34 O
ATOM 5 O5' A B 21 16.838 -8.417 51.335 1.00 45.56 O
ATOM 6 C5' A B 21 17.072 -9.029 50.067 1.00 45.14 C
ATOM 7 C4' A B 21 18.122 -8.244 49.304 1.00 45.07 C
ATOM 8 O4' A B 21 17.564 -6.958 48.952 1.00 44.59 O
ATOM 9 C3' A B 21 19.416 -7.958 50.067 1.00 45.35 C
ATOM 10 O3' A B 21 20.554 -8.225 49.234 1.00 46.24 O
ATOM 11 C2' A B 21 19.296 -6.484 50.462 1.00 44.99 C
ATOM 12 O2' A B 21 20.549 -5.830 50.532 1.00 44.79 O
ATOM 13 C1' A B 21 18.435 -5.917 49.332 1.00 44.46 C
ATOM 14 N9 A B 21 17.607 -4.777 49.722 1.00 44.24 N
ATOM 15 C8 A B 21 16.291 -4.812 50.099 1.00 44.17 C
ATOM 16 N7 A B 21 15.790 -3.638 50.399 1.00 44.16 N
ATOM 17 C5 A B 21 16.850 -2.769 50.207 1.00 44.18 C
ATOM 18 C6 A B 21 16.974 -1.369 50.357 1.00 44.18 C
ATOM 19 N6 A B 21 15.967 -0.583 50.752 1.00 44.16 N
ATOM 20 N1 A B 21 18.174 -0.805 50.084 1.00 44.23 N
ATOM 21 C2 A B 21 19.184 -1.594 49.682 1.00 44.22 C
ATOM 22 N3 A B 21 19.187 -2.919 49.509 1.00 44.21 N
ATOM 23 C4 A B 21 17.981 -3.453 49.788 1.00 44.20 C
ATOM 24 P U B 22 21.255 -9.669 49.237 1.00 46.66 P
ATOM 25 OP1 U B 22 21.214 -10.188 50.624 1.00 46.30 O
ATOM 26 OP2 U B 22 22.562 -9.548 48.549 1.00 46.53 O
ATOM 27 O5' U B 22 20.236 -10.532 48.336 1.00 46.88 O
TER
ATOM 2 P U A 20 9.616 -12.072 52.419 1.00 43.52 P
ATOM 3 OP1 U A 20 10.246 -13.035 53.350 1.00 43.75 O
ATOM 4 OP2 U A 20 8.350 -11.407 52.800 1.00 43.38 O
ATOM 5 O5' U A 20 10.689 -10.943 52.069 1.00 43.81 O
ATOM 6 C5' U A 20 11.954 -11.284 51.514 1.00 44.53 C
ATOM 7 C4' U A 20 12.545 -10.083 50.803 1.00 45.22 C
ATOM 8 O4' U A 20 11.528 -9.466 49.971 1.00 45.84 O
ATOM 9 C3' U A 20 13.074 -8.994 51.730 1.00 45.41 C
ATOM 10 O3' U A 20 14.373 -8.607 51.321 1.00 45.46 O
ATOM 11 C2' U A 20 12.081 -7.845 51.577 1.00 45.71 C
ATOM 12 O2' U A 20 12.701 -6.577 51.663 1.00 45.80 O
ATOM 13 C1' U A 20 11.529 -8.070 50.173 1.00 46.24 C
ATOM 14 N1 U A 20 10.146 -7.508 50.015 1.00 46.57 N
ATOM 15 C2 U A 20 9.988 -6.299 49.356 1.00 46.65 C
ATOM 16 O2 U A 20 10.912 -5.664 48.878 1.00 46.63 O
ATOM 17 N3 U A 20 8.689 -5.852 49.270 1.00 46.79 N
ATOM 18 C4 U A 20 7.558 -6.474 49.772 1.00 46.64 C
ATOM 19 O4 U A 20 6.460 -5.950 49.612 1.00 46.64 O
ATOM 20 C5 U A 20 7.799 -7.727 50.448 1.00 46.66 C
ATOM 21 C6 U A 20 9.056 -8.185 50.544 1.00 46.65 C
ATOM 22 P A A 21 15.631 -8.890 52.266 1.00 45.45 P
ATOM 23 OP1 A A 21 15.746 -10.352 52.462 1.00 45.81 O
ATOM 24 OP2 A A 21 15.559 -7.994 53.440 1.00 45.34 O
ATOM 25 O5' A A 21 16.838 -8.417 51.335 1.00 45.56 O
TER
ATOM 1 O3' U B 20 14.373 -8.607 51.321 1.00 45.46 O
ATOM 2 P A B 21 15.631 -8.890 52.266 1.00 45.45 P
ATOM 3 OP1 A B 21 15.746 -10.352 52.462 1.00 45.81 O
ATOM 4 OP2 A B 21 15.559 -7.994 53.440 1.00 45.34 O
ATOM 5 O5' A B 21 16.838 -8.417 51.335 1.00 45.56 O
ATOM 6 C5' A B 21 17.072 -9.029 50.067 1.00 45.14 C
ATOM 7 C4' A B 21 18.122 -8.244 49.304 1.00 45.07 C
ATOM 8 O4' A B 21 17.564 -6.958 48.952 1.00 44.59 O
ATOM 9 C3' A B 21 19.416 -7.958 50.067 1.00 45.35 C
ATOM 10 O3' A B 21 20.554 -8.225 49.234 1.00 46.24 O
ATOM 11 C2' A B 21 19.296 -6.484 50.462 1.00 44.99 C
ATOM 12 O2' A B 21 20.549 -5.830 50.532 1.00 44.79 O
ATOM 13 C1' A B 21 18.435 -5.917 49.332 1.00 44.46 C
ATOM 14 N9 A B 21 17.607 -4.777 49.722 1.00 44.24 N
ATOM 15 C8 A B 21 16.291 -4.812 50.099 1.00 44.17 C
ATOM 16 N7 A B 21 15.790 -3.638 50.399 1.00 44.16 N
ATOM 17 C5 A B 21 16.850 -2.769 50.207 1.00 44.18 C
ATOM 18 C6 A B 21 16.974 -1.369 50.357 1.00 44.18 C
ATOM 19 N6 A B 21 15.967 -0.583 50.752 1.00 44.16 N
ATOM 20 N1 A B 21 18.174 -0.805 50.084 1.00 44.23 N
ATOM 21 C2 A B 21 19.184 -1.594 49.682 1.00 44.22 C
ATOM 22 N3 A B 21 19.187 -2.919 49.509 1.00 44.21 N
ATOM 23 C4 A B 21 17.981 -3.453 49.788 1.00 44.20 C
ATOM 24 P U B 22 21.255 -9.669 49.237 1.00 46.66 P
ATOM 25 OP1 U B 22 21.214 -10.188 50.624 1.00 46.30 O
ATOM 26 OP2 U B 22 22.562 -9.548 48.549 1.00 46.53 O
ATOM 27 O5' U B 22 20.236 -10.532 48.336 1.00 46.88 O
TER
Atoms:
C4: (7.558,-6.474,49.772)
N3: (8.689,-5.852,49.270)
OP1: (10.246,-13.035,53.350)
OP2: (8.350,-11.407,52.800)
C2: (9.988,-6.299,49.356)
C1': (11.529,-8.070,50.173)
C3': (13.074,-8.994,51.730)
O5': (10.689,-10.943,52.069)
O4': (11.528,-9.466,49.971)
C5': (11.954,-11.284,51.514)
P: (9.616,-12.072,52.419)
C4': (12.545,-10.083,50.803)
C2': (12.081,-7.845,51.577)
O2': (12.701,-6.577,51.663)
N1: (10.146,-7.508,50.015)
O4: (6.460,-5.950,49.612)
O2: (10.912,-5.664,48.878)
C6: (9.056,-8.185,50.544)
C5: (7.799,-7.727,50.448)
O3': (14.373,-8.607,51.321)
N3: (8.689,-5.852,49.270)
OP1: (10.246,-13.035,53.350)
OP2: (8.350,-11.407,52.800)
C2: (9.988,-6.299,49.356)
C1': (11.529,-8.070,50.173)
C3': (13.074,-8.994,51.730)
O5': (10.689,-10.943,52.069)
O4': (11.528,-9.466,49.971)
C5': (11.954,-11.284,51.514)
P: (9.616,-12.072,52.419)
C4': (12.545,-10.083,50.803)
C2': (12.081,-7.845,51.577)
O2': (12.701,-6.577,51.663)
N1: (10.146,-7.508,50.015)
O4: (6.460,-5.950,49.612)
O2: (10.912,-5.664,48.878)
C6: (9.056,-8.185,50.544)
C5: (7.799,-7.727,50.448)
O3': (14.373,-8.607,51.321)
OP1: (15.746,-10.352,52.462)
OP2: (15.559,-7.994,53.440)
C3': (19.416,-7.958,50.067)
C1': (18.435,-5.917,49.332)
C5': (17.072,-9.029,50.067)
O4': (17.564,-6.958,48.952)
C8: (16.291,-4.812,50.099)
O2': (20.549,-5.830,50.532)
C6: (16.974,-1.369,50.357)
C5: (16.850,-2.769,50.207)
C4: (17.981,-3.453,49.788)
P: (15.631,-8.890,52.266)
C4': (18.122,-8.244,49.304)
C2': (19.296,-6.484,50.462)
C2: (19.184,-1.594,49.682)
N1: (18.174,-0.805,50.084)
N3: (19.187,-2.919,49.509)
N6: (15.967,-0.583,50.752)
N7: (15.790,-3.638,50.399)
N9: (17.607,-4.777,49.722)
O5': (16.838,-8.417,51.335)
O3': (20.554,-8.225,49.234)
OP2: (15.559,-7.994,53.440)
C3': (19.416,-7.958,50.067)
C1': (18.435,-5.917,49.332)
C5': (17.072,-9.029,50.067)
O4': (17.564,-6.958,48.952)
C8: (16.291,-4.812,50.099)
O2': (20.549,-5.830,50.532)
C6: (16.974,-1.369,50.357)
C5: (16.850,-2.769,50.207)
C4: (17.981,-3.453,49.788)
P: (15.631,-8.890,52.266)
C4': (18.122,-8.244,49.304)
C2': (19.296,-6.484,50.462)
C2: (19.184,-1.594,49.682)
N1: (18.174,-0.805,50.084)
N3: (19.187,-2.919,49.509)
N6: (15.967,-0.583,50.752)
N7: (15.790,-3.638,50.399)
N9: (17.607,-4.777,49.722)
O5': (16.838,-8.417,51.335)
O3': (20.554,-8.225,49.234)
Image (generated by PyMOL):