Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0656:0666
Extra
PDB:
ATOM 1 O3' C A 655 46.664 105.984 24.336 1.00 49.12 O
ATOM 2 P C A 656 45.506 106.870 23.651 1.00 48.49 P
ATOM 3 OP1 C A 656 46.164 107.781 22.691 1.00 52.03 O
ATOM 4 OP2 C A 656 44.641 107.436 24.717 1.00 48.18 O
ATOM 5 O5' C A 656 44.657 105.821 22.802 1.00 47.19 O
ATOM 6 C5' C A 656 45.196 105.229 21.602 1.00 48.13 C
ATOM 7 C4' C A 656 44.123 104.452 20.866 1.00 50.30 C
ATOM 8 O4' C A 656 43.710 103.306 21.663 1.00 51.14 O
ATOM 9 C3' C A 656 42.828 105.204 20.594 1.00 50.56 C
ATOM 10 O3' C A 656 42.905 106.044 19.447 1.00 49.62 O
ATOM 11 C2' C A 656 41.828 104.069 20.430 1.00 51.09 C
ATOM 12 O2' C A 656 41.906 103.453 19.161 1.00 51.84 O
ATOM 13 C1' C A 656 42.314 103.089 21.502 1.00 51.62 C
ATOM 14 N1 C A 656 41.648 103.302 22.807 1.00 52.21 N
ATOM 15 C2 C A 656 40.355 102.794 23.000 1.00 51.82 C
ATOM 16 O2 C A 656 39.817 102.145 22.094 1.00 51.16 O
ATOM 17 N3 C A 656 39.725 103.022 24.173 1.00 53.37 N
ATOM 18 C4 C A 656 40.334 103.718 25.136 1.00 52.63 C
ATOM 19 N4 C A 656 39.662 103.931 26.270 1.00 51.76 N
ATOM 20 C5 C A 656 41.653 104.227 24.977 1.00 52.10 C
ATOM 21 C6 C A 656 42.268 103.998 23.810 1.00 52.03 C
ATOM 22 P G A 657 41.986 107.366 19.364 1.00 51.67 P
ATOM 23 OP1 G A 657 42.478 108.119 18.185 1.00 53.87 O
ATOM 24 OP2 G A 657 41.893 108.047 20.682 1.00 50.93 O
ATOM 25 O5' G A 657 40.531 106.812 19.041 1.00 53.09 O
TER
ATOM 1 O3' C B 665 28.360 100.553 27.648 1.00 42.19 O
ATOM 2 P G B 666 29.382 99.329 27.851 1.00 45.30 P
ATOM 3 OP1 G B 666 28.571 98.090 28.007 1.00 45.70 O
ATOM 4 OP2 G B 666 30.346 99.711 28.913 1.00 45.43 O
ATOM 5 O5' G B 666 30.196 99.243 26.482 1.00 44.99 O
ATOM 6 C5' G B 666 29.535 98.930 25.248 1.00 47.16 C
ATOM 7 C4' G B 666 30.496 99.048 24.091 1.00 49.57 C
ATOM 8 O4' G B 666 31.016 100.400 24.048 1.00 50.77 O
ATOM 9 C3' G B 666 31.745 98.183 24.145 1.00 51.88 C
ATOM 10 O3' G B 666 31.498 96.857 23.688 1.00 52.80 O
ATOM 11 C2' G B 666 32.680 98.925 23.202 1.00 52.95 C
ATOM 12 O2' G B 666 32.426 98.667 21.836 1.00 55.88 O
ATOM 13 C1' G B 666 32.332 100.381 23.518 1.00 53.27 C
ATOM 14 N9 G B 666 33.255 100.947 24.498 1.00 55.79 N
ATOM 15 C8 G B 666 33.028 101.198 25.832 1.00 57.47 C
ATOM 16 N7 G B 666 34.082 101.655 26.452 1.00 58.01 N
ATOM 17 C5 G B 666 35.059 101.716 25.468 1.00 57.61 C
ATOM 18 C6 G B 666 36.414 102.114 25.543 1.00 58.58 C
ATOM 19 O6 G B 666 37.058 102.486 26.534 1.00 60.29 O
ATOM 20 N1 G B 666 37.037 102.037 24.299 1.00 59.26 N
ATOM 21 C2 G B 666 36.438 101.620 23.137 1.00 56.87 C
ATOM 22 N2 G B 666 37.197 101.628 22.042 1.00 55.88 N
ATOM 23 N3 G B 666 35.185 101.229 23.059 1.00 56.86 N
ATOM 24 C4 G B 666 34.557 101.303 24.253 1.00 57.02 C
ATOM 25 P G B 667 32.409 95.636 24.214 1.00 55.82 P
ATOM 26 OP1 G B 667 32.009 94.467 23.392 1.00 57.12 O
ATOM 27 OP2 G B 667 32.323 95.552 25.696 1.00 55.37 O
ATOM 28 O5' G B 667 33.904 96.012 23.804 1.00 52.73 O
TER
ATOM 2 P C A 656 45.506 106.870 23.651 1.00 48.49 P
ATOM 3 OP1 C A 656 46.164 107.781 22.691 1.00 52.03 O
ATOM 4 OP2 C A 656 44.641 107.436 24.717 1.00 48.18 O
ATOM 5 O5' C A 656 44.657 105.821 22.802 1.00 47.19 O
ATOM 6 C5' C A 656 45.196 105.229 21.602 1.00 48.13 C
ATOM 7 C4' C A 656 44.123 104.452 20.866 1.00 50.30 C
ATOM 8 O4' C A 656 43.710 103.306 21.663 1.00 51.14 O
ATOM 9 C3' C A 656 42.828 105.204 20.594 1.00 50.56 C
ATOM 10 O3' C A 656 42.905 106.044 19.447 1.00 49.62 O
ATOM 11 C2' C A 656 41.828 104.069 20.430 1.00 51.09 C
ATOM 12 O2' C A 656 41.906 103.453 19.161 1.00 51.84 O
ATOM 13 C1' C A 656 42.314 103.089 21.502 1.00 51.62 C
ATOM 14 N1 C A 656 41.648 103.302 22.807 1.00 52.21 N
ATOM 15 C2 C A 656 40.355 102.794 23.000 1.00 51.82 C
ATOM 16 O2 C A 656 39.817 102.145 22.094 1.00 51.16 O
ATOM 17 N3 C A 656 39.725 103.022 24.173 1.00 53.37 N
ATOM 18 C4 C A 656 40.334 103.718 25.136 1.00 52.63 C
ATOM 19 N4 C A 656 39.662 103.931 26.270 1.00 51.76 N
ATOM 20 C5 C A 656 41.653 104.227 24.977 1.00 52.10 C
ATOM 21 C6 C A 656 42.268 103.998 23.810 1.00 52.03 C
ATOM 22 P G A 657 41.986 107.366 19.364 1.00 51.67 P
ATOM 23 OP1 G A 657 42.478 108.119 18.185 1.00 53.87 O
ATOM 24 OP2 G A 657 41.893 108.047 20.682 1.00 50.93 O
ATOM 25 O5' G A 657 40.531 106.812 19.041 1.00 53.09 O
TER
ATOM 1 O3' C B 665 28.360 100.553 27.648 1.00 42.19 O
ATOM 2 P G B 666 29.382 99.329 27.851 1.00 45.30 P
ATOM 3 OP1 G B 666 28.571 98.090 28.007 1.00 45.70 O
ATOM 4 OP2 G B 666 30.346 99.711 28.913 1.00 45.43 O
ATOM 5 O5' G B 666 30.196 99.243 26.482 1.00 44.99 O
ATOM 6 C5' G B 666 29.535 98.930 25.248 1.00 47.16 C
ATOM 7 C4' G B 666 30.496 99.048 24.091 1.00 49.57 C
ATOM 8 O4' G B 666 31.016 100.400 24.048 1.00 50.77 O
ATOM 9 C3' G B 666 31.745 98.183 24.145 1.00 51.88 C
ATOM 10 O3' G B 666 31.498 96.857 23.688 1.00 52.80 O
ATOM 11 C2' G B 666 32.680 98.925 23.202 1.00 52.95 C
ATOM 12 O2' G B 666 32.426 98.667 21.836 1.00 55.88 O
ATOM 13 C1' G B 666 32.332 100.381 23.518 1.00 53.27 C
ATOM 14 N9 G B 666 33.255 100.947 24.498 1.00 55.79 N
ATOM 15 C8 G B 666 33.028 101.198 25.832 1.00 57.47 C
ATOM 16 N7 G B 666 34.082 101.655 26.452 1.00 58.01 N
ATOM 17 C5 G B 666 35.059 101.716 25.468 1.00 57.61 C
ATOM 18 C6 G B 666 36.414 102.114 25.543 1.00 58.58 C
ATOM 19 O6 G B 666 37.058 102.486 26.534 1.00 60.29 O
ATOM 20 N1 G B 666 37.037 102.037 24.299 1.00 59.26 N
ATOM 21 C2 G B 666 36.438 101.620 23.137 1.00 56.87 C
ATOM 22 N2 G B 666 37.197 101.628 22.042 1.00 55.88 N
ATOM 23 N3 G B 666 35.185 101.229 23.059 1.00 56.86 N
ATOM 24 C4 G B 666 34.557 101.303 24.253 1.00 57.02 C
ATOM 25 P G B 667 32.409 95.636 24.214 1.00 55.82 P
ATOM 26 OP1 G B 667 32.009 94.467 23.392 1.00 57.12 O
ATOM 27 OP2 G B 667 32.323 95.552 25.696 1.00 55.37 O
ATOM 28 O5' G B 667 33.904 96.012 23.804 1.00 52.73 O
TER
Atoms:
C2: (40.355,102.794,23.000)
OP1: (46.164,107.781,22.691)
OP2: (44.641,107.436,24.717)
C4: (40.334,103.718,25.136)
O5': (44.657,105.821,22.802)
C3': (42.828,105.204,20.594)
C1': (42.314,103.089,21.502)
O4': (43.710,103.306,21.663)
C5': (45.196,105.229,21.602)
P: (45.506,106.870,23.651)
O2: (39.817,102.145,22.094)
C4': (44.123,104.452,20.866)
C2': (41.828,104.069,20.430)
O2': (41.906,103.453,19.161)
N1: (41.648,103.302,22.807)
N3: (39.725,103.022,24.173)
N4: (39.662,103.931,26.270)
C6: (42.268,103.998,23.810)
C5: (41.653,104.227,24.977)
O3': (42.905,106.044,19.447)
OP1: (46.164,107.781,22.691)
OP2: (44.641,107.436,24.717)
C4: (40.334,103.718,25.136)
O5': (44.657,105.821,22.802)
C3': (42.828,105.204,20.594)
C1': (42.314,103.089,21.502)
O4': (43.710,103.306,21.663)
C5': (45.196,105.229,21.602)
P: (45.506,106.870,23.651)
O2: (39.817,102.145,22.094)
C4': (44.123,104.452,20.866)
C2': (41.828,104.069,20.430)
O2': (41.906,103.453,19.161)
N1: (41.648,103.302,22.807)
N3: (39.725,103.022,24.173)
N4: (39.662,103.931,26.270)
C6: (42.268,103.998,23.810)
C5: (41.653,104.227,24.977)
O3': (42.905,106.044,19.447)
OP1: (28.571,98.090,28.007)
OP2: (30.346,99.711,28.913)
C3': (31.745,98.183,24.145)
C1': (32.332,100.381,23.518)
C5': (29.535,98.930,25.248)
O6: (37.058,102.486,26.534)
O4': (31.016,100.400,24.048)
C8: (33.028,101.198,25.832)
C2: (36.438,101.620,23.137)
C6: (36.414,102.114,25.543)
C5: (35.059,101.716,25.468)
C4: (34.557,101.303,24.253)
P: (29.382,99.329,27.851)
C4': (30.496,99.048,24.091)
C2': (32.680,98.925,23.202)
O2': (32.426,98.667,21.836)
N1: (37.037,102.037,24.299)
N2: (37.197,101.628,22.042)
N3: (35.185,101.229,23.059)
N7: (34.082,101.655,26.452)
N9: (33.255,100.947,24.498)
O5': (30.196,99.243,26.482)
O3': (31.498,96.857,23.688)
OP2: (30.346,99.711,28.913)
C3': (31.745,98.183,24.145)
C1': (32.332,100.381,23.518)
C5': (29.535,98.930,25.248)
O6: (37.058,102.486,26.534)
O4': (31.016,100.400,24.048)
C8: (33.028,101.198,25.832)
C2: (36.438,101.620,23.137)
C6: (36.414,102.114,25.543)
C5: (35.059,101.716,25.468)
C4: (34.557,101.303,24.253)
P: (29.382,99.329,27.851)
C4': (30.496,99.048,24.091)
C2': (32.680,98.925,23.202)
O2': (32.426,98.667,21.836)
N1: (37.037,102.037,24.299)
N2: (37.197,101.628,22.042)
N3: (35.185,101.229,23.059)
N7: (34.082,101.655,26.452)
N9: (33.255,100.947,24.498)
O5': (30.196,99.243,26.482)
O3': (31.498,96.857,23.688)
Image (generated by PyMOL):