ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CD6:0275:0353

Extra

PDB:
ATOM 1 O3' U A 274 68.167 109.781 3.915 1.00 92.97 O
ATOM 2 P C A 275 67.815 111.234 4.493 1.00 92.69 P
ATOM 3 OP1 C A 275 68.216 111.248 5.927 1.00 92.20 O
ATOM 4 OP2 C A 275 66.412 111.552 4.120 1.00 91.64 O
ATOM 5 O5' C A 275 68.800 112.202 3.698 1.00 91.16 O
ATOM 6 C5' C A 275 70.206 112.239 4.009 1.00 90.72 C
ATOM 7 C4' C A 275 70.932 113.169 3.063 1.00 90.84 C
ATOM 8 O4' C A 275 70.812 112.659 1.706 1.00 91.15 O
ATOM 9 C3' C A 275 70.384 114.583 2.964 1.00 90.60 C
ATOM 10 O3' C A 275 70.803 115.432 4.022 1.00 90.75 O
ATOM 11 C2' C A 275 70.904 115.027 1.605 1.00 90.46 C
ATOM 12 O2' C A 275 72.276 115.371 1.631 1.00 89.97 O
ATOM 13 C1' C A 275 70.708 113.746 0.793 1.00 90.22 C
ATOM 14 N1 C A 275 69.379 113.691 0.145 1.00 89.51 N
ATOM 15 C2 C A 275 69.247 114.135 -1.178 1.00 89.18 C
ATOM 16 O2 C A 275 70.251 114.550 -1.782 1.00 89.38 O
ATOM 17 N3 C A 275 68.030 114.100 -1.767 1.00 88.86 N
ATOM 18 C4 C A 275 66.972 113.647 -1.092 1.00 88.27 C
ATOM 19 N4 C A 275 65.791 113.632 -1.717 1.00 88.23 N
ATOM 20 C5 C A 275 67.076 113.188 0.251 1.00 87.97 C
ATOM 21 C6 C A 275 68.284 113.225 0.824 1.00 88.83 C
ATOM 22 P A A 276 69.918 116.721 4.398 1.00 91.53 P
ATOM 23 OP1 A A 276 70.503 117.321 5.622 1.00 91.65 O
ATOM 24 OP2 A A 276 68.480 116.341 4.384 1.00 90.53 O
ATOM 25 O5' A A 276 70.167 117.725 3.186 1.00 92.71 O
TER

ATOM 1 O3' U B 352 63.713 119.255 -11.580 1.00 84.56 O
ATOM 2 P G B 353 64.262 117.837 -12.099 1.00 84.91 P
ATOM 3 OP1 G B 353 64.403 117.947 -13.570 1.00 85.24 O
ATOM 4 OP2 G B 353 63.430 116.747 -11.525 1.00 84.40 O
ATOM 5 O5' G B 353 65.710 117.737 -11.449 1.00 83.86 O
ATOM 6 C5' G B 353 66.661 118.799 -11.606 1.00 85.01 C
ATOM 7 C4' G B 353 67.715 118.708 -10.535 1.00 86.86 C
ATOM 8 O4' G B 353 67.097 118.920 -9.241 1.00 87.41 O
ATOM 9 C3' G B 353 68.377 117.348 -10.401 1.00 88.33 C
ATOM 10 O3' G B 353 69.412 117.162 -11.353 1.00 89.94 O
ATOM 11 C2' G B 353 68.881 117.368 -8.965 1.00 88.30 C
ATOM 12 O2' G B 353 70.089 118.084 -8.796 1.00 88.56 O
ATOM 13 C1' G B 353 67.740 118.110 -8.267 1.00 88.01 C
ATOM 14 N9 G B 353 66.751 117.209 -7.680 1.00 87.89 N
ATOM 15 C8 G B 353 65.508 116.886 -8.172 1.00 88.12 C
ATOM 16 N7 G B 353 64.858 116.047 -7.411 1.00 88.53 N
ATOM 17 C5 G B 353 65.724 115.801 -6.355 1.00 88.53 C
ATOM 18 C6 G B 353 65.573 114.970 -5.211 1.00 88.45 C
ATOM 19 O6 G B 353 64.611 114.256 -4.897 1.00 88.76 O
ATOM 20 N1 G B 353 66.698 115.020 -4.394 1.00 87.95 N
ATOM 21 C2 G B 353 67.824 115.768 -4.644 1.00 88.06 C
ATOM 22 N2 G B 353 68.807 115.692 -3.740 1.00 87.19 N
ATOM 23 N3 G B 353 67.977 116.538 -5.704 1.00 88.01 N
ATOM 24 C4 G B 353 66.897 116.509 -6.509 1.00 88.05 C
ATOM 25 P U B 354 69.668 115.702 -11.965 1.00 91.63 P
ATOM 26 OP1 U B 354 70.654 115.847 -13.067 1.00 91.09 O
ATOM 27 OP2 U B 354 68.346 115.077 -12.239 1.00 90.42 O
ATOM 28 O5' U B 354 70.371 114.913 -10.773 1.00 91.88 O
TER

Atoms:
C2: (69.247,114.135,-1.178)
OP1: (68.216,111.248,5.927)
OP2: (66.412,111.552,4.120)
C4: (66.972,113.647,-1.092)
O5': (68.800,112.202,3.698)
C3': (70.384,114.583,2.964)
C1': (70.708,113.746,0.793)
O4': (70.812,112.659,1.706)
C5': (70.206,112.239,4.009)
P: (67.815,111.234,4.493)
O2: (70.251,114.550,-1.782)
C4': (70.932,113.169,3.063)
C2': (70.904,115.027,1.605)
O2': (72.276,115.371,1.631)
N1: (69.379,113.691,0.145)
N3: (68.030,114.100,-1.767)
N4: (65.791,113.632,-1.717)
C6: (68.284,113.225,0.824)
C5: (67.076,113.188,0.251)
O3': (70.803,115.432,4.022)
OP1: (64.403,117.947,-13.570)
OP2: (63.430,116.747,-11.525)
C3': (68.377,117.348,-10.401)
C1': (67.740,118.110,-8.267)
C5': (66.661,118.799,-11.606)
O6: (64.611,114.256,-4.897)
O4': (67.097,118.920,-9.241)
C8: (65.508,116.886,-8.172)
C2: (67.824,115.768,-4.644)
C6: (65.573,114.970,-5.211)
C5: (65.724,115.801,-6.355)
C4: (66.897,116.509,-6.509)
P: (64.262,117.837,-12.099)
C4': (67.715,118.708,-10.535)
C2': (68.881,117.368,-8.965)
O2': (70.089,118.084,-8.796)
N1: (66.698,115.020,-4.394)
N2: (68.807,115.692,-3.740)
N3: (67.977,116.538,-5.704)
N7: (64.858,116.047,-7.411)
N9: (66.751,117.209,-7.680)
O5': (65.710,117.737,-11.449)
O3': (69.412,117.162,-11.353)
Image (generated by PyMOL):
PyMOL image
show in jmol