ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A686:A687

Extra

PDB:
ATOM 1 O3' A A 685 67.196 28.992 -19.192 1.00 58.04 O
ATOM 2 P C A 686 66.405 30.387 -19.074 1.00 58.81 P
ATOM 3 OP1 C A 686 66.081 30.618 -17.639 1.00 63.68 O
ATOM 4 OP2 C A 686 65.320 30.427 -20.085 1.00 56.38 O
ATOM 5 O5' C A 686 67.476 31.467 -19.532 1.00 59.47 O
ATOM 6 C5' C A 686 67.070 32.789 -19.861 1.00 65.84 C
ATOM 7 C4' C A 686 67.170 32.990 -21.350 1.00 68.35 C
ATOM 8 O4' C A 686 66.494 31.943 -22.080 1.00 70.05 O
ATOM 9 C3' C A 686 66.701 34.308 -21.948 1.00 69.64 C
ATOM 10 O3' C A 686 67.820 35.021 -22.435 1.00 69.90 O
ATOM 11 C2' C A 686 65.731 33.901 -23.069 1.00 67.72 C
ATOM 12 O2' C A 686 65.891 34.699 -24.226 1.00 72.58 O
ATOM 13 C1' C A 686 66.130 32.450 -23.343 1.00 70.55 C
ATOM 14 N1 C A 686 65.093 31.561 -23.920 1.00 63.53 N
ATOM 15 C2 C A 686 64.846 31.593 -25.306 1.00 65.47 C
ATOM 16 O2 C A 686 65.494 32.373 -26.022 1.00 67.19 O
ATOM 17 N3 C A 686 63.908 30.771 -25.824 1.00 68.60 N
ATOM 18 C4 C A 686 63.243 29.934 -25.028 1.00 68.72 C
ATOM 19 N4 C A 686 62.337 29.128 -25.576 1.00 71.67 N
ATOM 20 C5 C A 686 63.479 29.879 -23.627 1.00 66.93 C
ATOM 21 C6 C A 686 64.397 30.702 -23.121 1.00 64.06 C
ATOM 22 P G A 687 67.819 36.607 -22.325 1.00 69.33 P
ATOM 23 OP1 G A 687 67.910 36.963 -20.883 1.00 68.84 O
ATOM 24 OP2 G A 687 66.625 37.006 -23.112 1.00 69.79 O
ATOM 25 O5' G A 687 69.120 37.081 -23.121 1.00 63.81 O
TER

ATOM 1 O3' C B 686 67.820 35.021 -22.435 1.00 69.90 O
ATOM 2 P G B 687 67.819 36.607 -22.325 1.00 69.33 P
ATOM 3 OP1 G B 687 67.910 36.963 -20.883 1.00 68.84 O
ATOM 4 OP2 G B 687 66.625 37.006 -23.112 1.00 69.79 O
ATOM 5 O5' G B 687 69.120 37.081 -23.121 1.00 63.81 O
ATOM 6 C5' G B 687 70.416 36.533 -22.878 1.00 69.51 C
ATOM 7 C4' G B 687 71.399 37.147 -23.843 1.00 65.79 C
ATOM 8 O4' G B 687 71.085 36.684 -25.184 1.00 64.73 O
ATOM 9 C3' G B 687 71.255 38.659 -23.927 1.00 67.64 C
ATOM 10 O3' G B 687 72.028 39.279 -22.919 1.00 68.82 O
ATOM 11 C2' G B 687 71.730 38.968 -25.339 1.00 72.90 C
ATOM 12 O2' G B 687 73.125 38.915 -25.414 1.00 75.26 O
ATOM 13 C1' G B 687 71.184 37.764 -26.106 1.00 71.94 C
ATOM 14 N9 G B 687 69.865 38.005 -26.695 1.00 77.91 N
ATOM 15 C8 G B 687 68.639 37.744 -26.117 1.00 77.23 C
ATOM 16 N7 G B 687 67.629 38.049 -26.886 1.00 73.58 N
ATOM 17 C5 G B 687 68.212 38.545 -28.040 1.00 76.65 C
ATOM 18 C6 G B 687 67.613 39.013 -29.228 1.00 73.52 C
ATOM 19 O6 G B 687 66.415 39.073 -29.503 1.00 69.37 O
ATOM 20 N1 G B 687 68.564 39.431 -30.153 1.00 76.55 N
ATOM 21 C2 G B 687 69.927 39.385 -29.963 1.00 78.73 C
ATOM 22 N2 G B 687 70.675 39.820 -30.989 1.00 78.15 N
ATOM 23 N3 G B 687 70.508 38.940 -28.853 1.00 73.07 N
ATOM 24 C4 G B 687 69.594 38.538 -27.941 1.00 77.14 C
ATOM 25 P C B 688 71.381 40.479 -22.067 1.00 71.27 P
ATOM 26 OP1 C B 688 72.444 40.932 -21.126 1.00 79.90 O
ATOM 27 OP2 C B 688 70.083 39.998 -21.538 1.00 67.90 O
ATOM 28 O5' C B 688 71.122 41.630 -23.143 1.00 76.13 O
TER

Atoms:
C2: (64.846,31.593,-25.306)
OP1: (66.081,30.618,-17.639)
OP2: (65.320,30.427,-20.085)
C4: (63.243,29.934,-25.028)
O5': (67.476,31.467,-19.532)
C3': (66.701,34.308,-21.948)
C1': (66.130,32.450,-23.343)
O4': (66.494,31.943,-22.080)
C5': (67.070,32.789,-19.861)
P: (66.405,30.387,-19.074)
O2: (65.494,32.373,-26.022)
C4': (67.170,32.990,-21.350)
C2': (65.731,33.901,-23.069)
O2': (65.891,34.699,-24.226)
N1: (65.093,31.561,-23.920)
N3: (63.908,30.771,-25.824)
N4: (62.337,29.128,-25.576)
C6: (64.397,30.702,-23.121)
C5: (63.479,29.879,-23.627)
O3': (67.820,35.021,-22.435)
OP1: (67.910,36.963,-20.883)
OP2: (66.625,37.006,-23.112)
C3': (71.255,38.659,-23.927)
C1': (71.184,37.764,-26.106)
C5': (70.416,36.533,-22.878)
O6: (66.415,39.073,-29.503)
O4': (71.085,36.684,-25.184)
C8: (68.639,37.744,-26.117)
C2: (69.927,39.385,-29.963)
C6: (67.613,39.013,-29.228)
C5: (68.212,38.545,-28.040)
C4: (69.594,38.538,-27.941)
P: (67.819,36.607,-22.325)
C4': (71.399,37.147,-23.843)
C2': (71.730,38.968,-25.339)
O2': (73.125,38.915,-25.414)
N1: (68.564,39.431,-30.153)
N2: (70.675,39.820,-30.989)
N3: (70.508,38.940,-28.853)
N7: (67.629,38.049,-26.886)
N9: (69.865,38.005,-26.695)
O5': (69.120,37.081,-23.121)
O3': (72.028,39.279,-22.919)
Image (generated by PyMOL):
PyMOL image
show in jmol