Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D19:D20
Extra
PDB:
ATOM 1 O3' A A 18 6.587 3.834 -53.932 1.00 51.02 O
ATOM 2 P U A 19 5.497 3.218 -52.924 1.00 49.63 P
ATOM 3 OP1 U A 19 4.493 4.279 -52.664 1.00 52.10 O
ATOM 4 OP2 U A 19 6.238 2.643 -51.776 1.00 51.72 O
ATOM 5 O5' U A 19 4.843 2.050 -53.784 1.00 50.20 O
ATOM 6 C5' U A 19 4.255 2.319 -55.053 1.00 50.05 C
ATOM 7 C4' U A 19 3.635 1.083 -55.654 1.00 49.17 C
ATOM 8 O4' U A 19 4.654 0.057 -55.785 1.00 46.13 O
ATOM 9 C3' U A 19 2.506 0.465 -54.839 1.00 54.18 C
ATOM 10 O3' U A 19 1.535 -0.093 -55.720 1.00 55.71 O
ATOM 11 C2' U A 19 3.206 -0.647 -54.063 1.00 50.71 C
ATOM 12 O2' U A 19 2.369 -1.720 -53.687 1.00 47.97 O
ATOM 13 C1' U A 19 4.290 -1.093 -55.044 1.00 47.86 C
ATOM 14 N1 U A 19 5.507 -1.601 -54.383 1.00 48.36 N
ATOM 15 C2 U A 19 6.068 -2.779 -54.828 1.00 44.44 C
ATOM 16 O2 U A 19 5.595 -3.432 -55.744 1.00 42.13 O
ATOM 17 N3 U A 19 7.203 -3.160 -54.152 1.00 44.71 N
ATOM 18 C4 U A 19 7.813 -2.492 -53.107 1.00 45.07 C
ATOM 19 O4 U A 19 8.832 -2.959 -52.595 1.00 45.33 O
ATOM 20 C5 U A 19 7.169 -1.279 -52.712 1.00 41.10 C
ATOM 21 C6 U A 19 6.067 -0.885 -53.352 1.00 45.89 C
ATOM 22 P A A 20 0.226 0.754 -56.104 1.00 47.94 P
ATOM 23 OP1 A A 20 0.647 2.167 -56.244 1.00 50.57 O
ATOM 24 OP2 A A 20 -0.819 0.418 -55.108 1.00 47.36 O
ATOM 25 O5' A A 20 -0.172 0.166 -57.527 1.00 49.66 O
TER
ATOM 1 O3' U B 19 1.535 -0.093 -55.720 1.00 55.71 O
ATOM 2 P A B 20 0.226 0.754 -56.104 1.00 47.94 P
ATOM 3 OP1 A B 20 0.647 2.167 -56.244 1.00 50.57 O
ATOM 4 OP2 A B 20 -0.819 0.418 -55.108 1.00 47.36 O
ATOM 5 O5' A B 20 -0.172 0.166 -57.527 1.00 49.66 O
ATOM 6 C5' A B 20 0.134 0.874 -58.723 1.00 48.45 C
ATOM 7 C4' A B 20 -0.608 0.306 -59.905 1.00 48.25 C
ATOM 8 O4' A B 20 -0.132 -1.043 -60.157 1.00 51.74 O
ATOM 9 C3' A B 20 -2.117 0.198 -59.725 1.00 48.99 C
ATOM 10 O3' A B 20 -2.762 0.383 -60.985 1.00 50.57 O
ATOM 11 C2' A B 20 -2.299 -1.243 -59.258 1.00 46.10 C
ATOM 12 O2' A B 20 -3.573 -1.791 -59.526 1.00 44.09 O
ATOM 13 C1' A B 20 -1.197 -1.967 -60.031 1.00 45.54 C
ATOM 14 N9 A B 20 -0.683 -3.157 -59.348 1.00 43.35 N
ATOM 15 C8 A B 20 0.160 -3.188 -58.266 1.00 43.27 C
ATOM 16 N7 A B 20 0.456 -4.398 -57.857 1.00 46.14 N
ATOM 17 C5 A B 20 -0.240 -5.221 -58.732 1.00 42.36 C
ATOM 18 C6 A B 20 -0.345 -6.620 -58.836 1.00 38.55 C
ATOM 19 N6 A B 20 0.276 -7.474 -58.018 1.00 38.53 N
ATOM 20 N1 A B 20 -1.121 -7.121 -59.822 1.00 42.28 N
ATOM 21 C2 A B 20 -1.745 -6.266 -60.643 1.00 43.37 C
ATOM 22 N3 A B 20 -1.727 -4.935 -60.648 1.00 42.45 N
ATOM 23 C4 A B 20 -0.946 -4.469 -59.657 1.00 42.93 C
ATOM 24 P U B 21 -3.692 1.670 -61.232 1.00 60.47 P
ATOM 25 OP1 U B 21 -4.316 2.013 -59.929 1.00 57.17 O
ATOM 26 OP2 U B 21 -4.572 1.360 -62.383 1.00 58.00 O
ATOM 27 O5' U B 21 -2.641 2.795 -61.640 1.00 55.81 O
TER
ATOM 2 P U A 19 5.497 3.218 -52.924 1.00 49.63 P
ATOM 3 OP1 U A 19 4.493 4.279 -52.664 1.00 52.10 O
ATOM 4 OP2 U A 19 6.238 2.643 -51.776 1.00 51.72 O
ATOM 5 O5' U A 19 4.843 2.050 -53.784 1.00 50.20 O
ATOM 6 C5' U A 19 4.255 2.319 -55.053 1.00 50.05 C
ATOM 7 C4' U A 19 3.635 1.083 -55.654 1.00 49.17 C
ATOM 8 O4' U A 19 4.654 0.057 -55.785 1.00 46.13 O
ATOM 9 C3' U A 19 2.506 0.465 -54.839 1.00 54.18 C
ATOM 10 O3' U A 19 1.535 -0.093 -55.720 1.00 55.71 O
ATOM 11 C2' U A 19 3.206 -0.647 -54.063 1.00 50.71 C
ATOM 12 O2' U A 19 2.369 -1.720 -53.687 1.00 47.97 O
ATOM 13 C1' U A 19 4.290 -1.093 -55.044 1.00 47.86 C
ATOM 14 N1 U A 19 5.507 -1.601 -54.383 1.00 48.36 N
ATOM 15 C2 U A 19 6.068 -2.779 -54.828 1.00 44.44 C
ATOM 16 O2 U A 19 5.595 -3.432 -55.744 1.00 42.13 O
ATOM 17 N3 U A 19 7.203 -3.160 -54.152 1.00 44.71 N
ATOM 18 C4 U A 19 7.813 -2.492 -53.107 1.00 45.07 C
ATOM 19 O4 U A 19 8.832 -2.959 -52.595 1.00 45.33 O
ATOM 20 C5 U A 19 7.169 -1.279 -52.712 1.00 41.10 C
ATOM 21 C6 U A 19 6.067 -0.885 -53.352 1.00 45.89 C
ATOM 22 P A A 20 0.226 0.754 -56.104 1.00 47.94 P
ATOM 23 OP1 A A 20 0.647 2.167 -56.244 1.00 50.57 O
ATOM 24 OP2 A A 20 -0.819 0.418 -55.108 1.00 47.36 O
ATOM 25 O5' A A 20 -0.172 0.166 -57.527 1.00 49.66 O
TER
ATOM 1 O3' U B 19 1.535 -0.093 -55.720 1.00 55.71 O
ATOM 2 P A B 20 0.226 0.754 -56.104 1.00 47.94 P
ATOM 3 OP1 A B 20 0.647 2.167 -56.244 1.00 50.57 O
ATOM 4 OP2 A B 20 -0.819 0.418 -55.108 1.00 47.36 O
ATOM 5 O5' A B 20 -0.172 0.166 -57.527 1.00 49.66 O
ATOM 6 C5' A B 20 0.134 0.874 -58.723 1.00 48.45 C
ATOM 7 C4' A B 20 -0.608 0.306 -59.905 1.00 48.25 C
ATOM 8 O4' A B 20 -0.132 -1.043 -60.157 1.00 51.74 O
ATOM 9 C3' A B 20 -2.117 0.198 -59.725 1.00 48.99 C
ATOM 10 O3' A B 20 -2.762 0.383 -60.985 1.00 50.57 O
ATOM 11 C2' A B 20 -2.299 -1.243 -59.258 1.00 46.10 C
ATOM 12 O2' A B 20 -3.573 -1.791 -59.526 1.00 44.09 O
ATOM 13 C1' A B 20 -1.197 -1.967 -60.031 1.00 45.54 C
ATOM 14 N9 A B 20 -0.683 -3.157 -59.348 1.00 43.35 N
ATOM 15 C8 A B 20 0.160 -3.188 -58.266 1.00 43.27 C
ATOM 16 N7 A B 20 0.456 -4.398 -57.857 1.00 46.14 N
ATOM 17 C5 A B 20 -0.240 -5.221 -58.732 1.00 42.36 C
ATOM 18 C6 A B 20 -0.345 -6.620 -58.836 1.00 38.55 C
ATOM 19 N6 A B 20 0.276 -7.474 -58.018 1.00 38.53 N
ATOM 20 N1 A B 20 -1.121 -7.121 -59.822 1.00 42.28 N
ATOM 21 C2 A B 20 -1.745 -6.266 -60.643 1.00 43.37 C
ATOM 22 N3 A B 20 -1.727 -4.935 -60.648 1.00 42.45 N
ATOM 23 C4 A B 20 -0.946 -4.469 -59.657 1.00 42.93 C
ATOM 24 P U B 21 -3.692 1.670 -61.232 1.00 60.47 P
ATOM 25 OP1 U B 21 -4.316 2.013 -59.929 1.00 57.17 O
ATOM 26 OP2 U B 21 -4.572 1.360 -62.383 1.00 58.00 O
ATOM 27 O5' U B 21 -2.641 2.795 -61.640 1.00 55.81 O
TER
Atoms:
C4: (7.813,-2.492,-53.107)
N3: (7.203,-3.160,-54.152)
OP1: (4.493,4.279,-52.664)
OP2: (6.238,2.643,-51.776)
C2: (6.068,-2.779,-54.828)
C1': (4.290,-1.093,-55.044)
C3': (2.506,0.465,-54.839)
O5': (4.843,2.050,-53.784)
O4': (4.654,0.057,-55.785)
C5': (4.255,2.319,-55.053)
P: (5.497,3.218,-52.924)
C4': (3.635,1.083,-55.654)
C2': (3.206,-0.647,-54.063)
O2': (2.369,-1.720,-53.687)
N1: (5.507,-1.601,-54.383)
O4: (8.832,-2.959,-52.595)
O2: (5.595,-3.432,-55.744)
C6: (6.067,-0.885,-53.352)
C5: (7.169,-1.279,-52.712)
O3': (1.535,-0.093,-55.720)
N3: (7.203,-3.160,-54.152)
OP1: (4.493,4.279,-52.664)
OP2: (6.238,2.643,-51.776)
C2: (6.068,-2.779,-54.828)
C1': (4.290,-1.093,-55.044)
C3': (2.506,0.465,-54.839)
O5': (4.843,2.050,-53.784)
O4': (4.654,0.057,-55.785)
C5': (4.255,2.319,-55.053)
P: (5.497,3.218,-52.924)
C4': (3.635,1.083,-55.654)
C2': (3.206,-0.647,-54.063)
O2': (2.369,-1.720,-53.687)
N1: (5.507,-1.601,-54.383)
O4: (8.832,-2.959,-52.595)
O2: (5.595,-3.432,-55.744)
C6: (6.067,-0.885,-53.352)
C5: (7.169,-1.279,-52.712)
O3': (1.535,-0.093,-55.720)
OP1: (0.647,2.167,-56.244)
OP2: (-0.819,0.418,-55.108)
C3': (-2.117,0.198,-59.725)
C1': (-1.197,-1.967,-60.031)
C5': (0.134,0.874,-58.723)
O4': (-0.132,-1.043,-60.157)
C8: (0.160,-3.188,-58.266)
O2': (-3.573,-1.791,-59.526)
C6: (-0.345,-6.620,-58.836)
C5: (-0.240,-5.221,-58.732)
C4: (-0.946,-4.469,-59.657)
P: (0.226,0.754,-56.104)
C4': (-0.608,0.306,-59.905)
C2': (-2.299,-1.243,-59.258)
C2: (-1.745,-6.266,-60.643)
N1: (-1.121,-7.121,-59.822)
N3: (-1.727,-4.935,-60.648)
N6: (0.276,-7.474,-58.018)
N7: (0.456,-4.398,-57.857)
N9: (-0.683,-3.157,-59.348)
O5': (-0.172,0.166,-57.527)
O3': (-2.762,0.383,-60.985)
OP2: (-0.819,0.418,-55.108)
C3': (-2.117,0.198,-59.725)
C1': (-1.197,-1.967,-60.031)
C5': (0.134,0.874,-58.723)
O4': (-0.132,-1.043,-60.157)
C8: (0.160,-3.188,-58.266)
O2': (-3.573,-1.791,-59.526)
C6: (-0.345,-6.620,-58.836)
C5: (-0.240,-5.221,-58.732)
C4: (-0.946,-4.469,-59.657)
P: (0.226,0.754,-56.104)
C4': (-0.608,0.306,-59.905)
C2': (-2.299,-1.243,-59.258)
C2: (-1.745,-6.266,-60.643)
N1: (-1.121,-7.121,-59.822)
N3: (-1.727,-4.935,-60.648)
N6: (0.276,-7.474,-58.018)
N7: (0.456,-4.398,-57.857)
N9: (-0.683,-3.157,-59.348)
O5': (-0.172,0.166,-57.527)
O3': (-2.762,0.383,-60.985)
Image (generated by PyMOL):