Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXB:B41:B58
Extra
PDB:
ATOM 1 O3' G A 40 5.883 -16.034 -1.667 1.00119.69 O
ATOM 2 P C A 41 6.484 -14.565 -1.886 1.00122.90 P
ATOM 3 OP1 C A 41 6.795 -14.423 -3.327 1.00123.71 O
ATOM 4 OP2 C A 41 7.542 -14.335 -0.873 1.00122.42 O
ATOM 5 O5' C A 41 5.256 -13.611 -1.510 1.00124.69 O
ATOM 6 C5' C A 41 4.075 -13.568 -2.309 1.00126.40 C
ATOM 7 C4' C A 41 3.008 -12.774 -1.585 1.00128.02 C
ATOM 8 O4' C A 41 2.688 -13.424 -0.331 1.00126.98 O
ATOM 9 C3' C A 41 3.455 -11.395 -1.136 1.00129.96 C
ATOM 10 O3' C A 41 3.433 -10.475 -2.206 1.00131.88 O
ATOM 11 C2' C A 41 2.457 -11.083 -0.025 1.00130.15 C
ATOM 12 O2' C A 41 1.175 -10.691 -0.482 1.00131.25 O
ATOM 13 C1' C A 41 2.404 -12.447 0.663 1.00128.08 C
ATOM 14 N1 C A 41 3.365 -12.573 1.826 1.00127.51 N
ATOM 15 C2 C A 41 3.017 -12.047 3.088 1.00127.66 C
ATOM 16 O2 C A 41 1.925 -11.486 3.246 1.00128.36 O
ATOM 17 N3 C A 41 3.897 -12.170 4.120 1.00126.94 N
ATOM 18 C4 C A 41 5.074 -12.780 3.934 1.00126.19 C
ATOM 19 N4 C A 41 5.902 -12.875 4.978 1.00125.60 N
ATOM 20 C5 C A 41 5.451 -13.319 2.666 1.00126.16 C
ATOM 21 C6 C A 41 4.578 -13.193 1.657 1.00126.78 C
ATOM 22 P U A 42 4.731 -9.575 -2.460 1.00133.33 P
ATOM 23 OP1 U A 42 4.769 -9.255 -3.906 1.00134.78 O
ATOM 24 OP2 U A 42 5.904 -10.213 -1.821 1.00131.78 O
ATOM 25 O5' U A 42 4.390 -8.257 -1.624 1.00134.79 O
TER
ATOM 1 O3' A B 57 3.811 -5.943 14.363 1.00137.66 O
ATOM 2 P G B 58 2.929 -7.267 14.552 1.00135.20 P
ATOM 3 OP1 G B 58 2.092 -7.068 15.756 1.00134.91 O
ATOM 4 OP2 G B 58 3.815 -8.453 14.470 1.00133.67 O
ATOM 5 O5' G B 58 2.002 -7.249 13.246 1.00134.84 O
ATOM 6 C5' G B 58 1.121 -6.151 13.008 1.00135.06 C
ATOM 7 C4' G B 58 0.624 -6.125 11.573 1.00134.80 C
ATOM 8 O4' G B 58 1.731 -5.997 10.645 1.00135.29 O
ATOM 9 C3' G B 58 -0.083 -7.385 11.101 1.00132.83 C
ATOM 10 O3' G B 58 -1.416 -7.445 11.586 1.00131.47 O
ATOM 11 C2' G B 58 -0.006 -7.207 9.590 1.00133.98 C
ATOM 12 O2' G B 58 -0.921 -6.251 9.085 1.00135.47 O
ATOM 13 C1' G B 58 1.435 -6.718 9.457 1.00134.89 C
ATOM 14 N9 G B 58 2.396 -7.815 9.287 1.00133.74 N
ATOM 15 C8 G B 58 3.324 -8.260 10.203 1.00132.74 C
ATOM 16 N7 G B 58 4.046 -9.261 9.777 1.00131.65 N
ATOM 17 C5 G B 58 3.572 -9.503 8.492 1.00131.86 C
ATOM 18 C6 G B 58 3.972 -10.474 7.534 1.00130.97 C
ATOM 19 O6 G B 58 4.853 -11.340 7.644 1.00129.72 O
ATOM 20 N1 G B 58 3.230 -10.387 6.353 1.00131.55 N
ATOM 21 C2 G B 58 2.226 -9.468 6.128 1.00132.90 C
ATOM 22 N2 G B 58 1.618 -9.523 4.935 1.00133.38 N
ATOM 23 N3 G B 58 1.843 -8.554 7.016 1.00133.68 N
ATOM 24 C4 G B 58 2.553 -8.624 8.176 1.00133.16 C
ATOM 25 P U B 59 -1.982 -8.833 12.152 1.00128.51 P
ATOM 26 OP1 U B 59 -3.282 -8.557 12.808 1.00128.32 O
ATOM 27 OP2 U B 59 -0.902 -9.503 12.918 1.00127.11 O
ATOM 28 O5' U B 59 -2.227 -9.678 10.811 1.00127.08 O
TER
ATOM 2 P C A 41 6.484 -14.565 -1.886 1.00122.90 P
ATOM 3 OP1 C A 41 6.795 -14.423 -3.327 1.00123.71 O
ATOM 4 OP2 C A 41 7.542 -14.335 -0.873 1.00122.42 O
ATOM 5 O5' C A 41 5.256 -13.611 -1.510 1.00124.69 O
ATOM 6 C5' C A 41 4.075 -13.568 -2.309 1.00126.40 C
ATOM 7 C4' C A 41 3.008 -12.774 -1.585 1.00128.02 C
ATOM 8 O4' C A 41 2.688 -13.424 -0.331 1.00126.98 O
ATOM 9 C3' C A 41 3.455 -11.395 -1.136 1.00129.96 C
ATOM 10 O3' C A 41 3.433 -10.475 -2.206 1.00131.88 O
ATOM 11 C2' C A 41 2.457 -11.083 -0.025 1.00130.15 C
ATOM 12 O2' C A 41 1.175 -10.691 -0.482 1.00131.25 O
ATOM 13 C1' C A 41 2.404 -12.447 0.663 1.00128.08 C
ATOM 14 N1 C A 41 3.365 -12.573 1.826 1.00127.51 N
ATOM 15 C2 C A 41 3.017 -12.047 3.088 1.00127.66 C
ATOM 16 O2 C A 41 1.925 -11.486 3.246 1.00128.36 O
ATOM 17 N3 C A 41 3.897 -12.170 4.120 1.00126.94 N
ATOM 18 C4 C A 41 5.074 -12.780 3.934 1.00126.19 C
ATOM 19 N4 C A 41 5.902 -12.875 4.978 1.00125.60 N
ATOM 20 C5 C A 41 5.451 -13.319 2.666 1.00126.16 C
ATOM 21 C6 C A 41 4.578 -13.193 1.657 1.00126.78 C
ATOM 22 P U A 42 4.731 -9.575 -2.460 1.00133.33 P
ATOM 23 OP1 U A 42 4.769 -9.255 -3.906 1.00134.78 O
ATOM 24 OP2 U A 42 5.904 -10.213 -1.821 1.00131.78 O
ATOM 25 O5' U A 42 4.390 -8.257 -1.624 1.00134.79 O
TER
ATOM 1 O3' A B 57 3.811 -5.943 14.363 1.00137.66 O
ATOM 2 P G B 58 2.929 -7.267 14.552 1.00135.20 P
ATOM 3 OP1 G B 58 2.092 -7.068 15.756 1.00134.91 O
ATOM 4 OP2 G B 58 3.815 -8.453 14.470 1.00133.67 O
ATOM 5 O5' G B 58 2.002 -7.249 13.246 1.00134.84 O
ATOM 6 C5' G B 58 1.121 -6.151 13.008 1.00135.06 C
ATOM 7 C4' G B 58 0.624 -6.125 11.573 1.00134.80 C
ATOM 8 O4' G B 58 1.731 -5.997 10.645 1.00135.29 O
ATOM 9 C3' G B 58 -0.083 -7.385 11.101 1.00132.83 C
ATOM 10 O3' G B 58 -1.416 -7.445 11.586 1.00131.47 O
ATOM 11 C2' G B 58 -0.006 -7.207 9.590 1.00133.98 C
ATOM 12 O2' G B 58 -0.921 -6.251 9.085 1.00135.47 O
ATOM 13 C1' G B 58 1.435 -6.718 9.457 1.00134.89 C
ATOM 14 N9 G B 58 2.396 -7.815 9.287 1.00133.74 N
ATOM 15 C8 G B 58 3.324 -8.260 10.203 1.00132.74 C
ATOM 16 N7 G B 58 4.046 -9.261 9.777 1.00131.65 N
ATOM 17 C5 G B 58 3.572 -9.503 8.492 1.00131.86 C
ATOM 18 C6 G B 58 3.972 -10.474 7.534 1.00130.97 C
ATOM 19 O6 G B 58 4.853 -11.340 7.644 1.00129.72 O
ATOM 20 N1 G B 58 3.230 -10.387 6.353 1.00131.55 N
ATOM 21 C2 G B 58 2.226 -9.468 6.128 1.00132.90 C
ATOM 22 N2 G B 58 1.618 -9.523 4.935 1.00133.38 N
ATOM 23 N3 G B 58 1.843 -8.554 7.016 1.00133.68 N
ATOM 24 C4 G B 58 2.553 -8.624 8.176 1.00133.16 C
ATOM 25 P U B 59 -1.982 -8.833 12.152 1.00128.51 P
ATOM 26 OP1 U B 59 -3.282 -8.557 12.808 1.00128.32 O
ATOM 27 OP2 U B 59 -0.902 -9.503 12.918 1.00127.11 O
ATOM 28 O5' U B 59 -2.227 -9.678 10.811 1.00127.08 O
TER
Atoms:
C2: (3.017,-12.047,3.088)
OP1: (6.795,-14.423,-3.327)
OP2: (7.542,-14.335,-0.873)
C4: (5.074,-12.780,3.934)
O5': (5.256,-13.611,-1.510)
C3': (3.455,-11.395,-1.136)
C1': (2.404,-12.447,0.663)
O4': (2.688,-13.424,-0.331)
C5': (4.075,-13.568,-2.309)
P: (6.484,-14.565,-1.886)
O2: (1.925,-11.486,3.246)
C4': (3.008,-12.774,-1.585)
C2': (2.457,-11.083,-0.025)
O2': (1.175,-10.691,-0.482)
N1: (3.365,-12.573,1.826)
N3: (3.897,-12.170,4.120)
N4: (5.902,-12.875,4.978)
C6: (4.578,-13.193,1.657)
C5: (5.451,-13.319,2.666)
O3': (3.433,-10.475,-2.206)
OP1: (6.795,-14.423,-3.327)
OP2: (7.542,-14.335,-0.873)
C4: (5.074,-12.780,3.934)
O5': (5.256,-13.611,-1.510)
C3': (3.455,-11.395,-1.136)
C1': (2.404,-12.447,0.663)
O4': (2.688,-13.424,-0.331)
C5': (4.075,-13.568,-2.309)
P: (6.484,-14.565,-1.886)
O2: (1.925,-11.486,3.246)
C4': (3.008,-12.774,-1.585)
C2': (2.457,-11.083,-0.025)
O2': (1.175,-10.691,-0.482)
N1: (3.365,-12.573,1.826)
N3: (3.897,-12.170,4.120)
N4: (5.902,-12.875,4.978)
C6: (4.578,-13.193,1.657)
C5: (5.451,-13.319,2.666)
O3': (3.433,-10.475,-2.206)
OP1: (2.092,-7.068,15.756)
OP2: (3.815,-8.453,14.470)
C3': (-0.083,-7.385,11.101)
C1': (1.435,-6.718,9.457)
C5': (1.121,-6.151,13.008)
O6: (4.853,-11.340,7.644)
O4': (1.731,-5.997,10.645)
C8: (3.324,-8.260,10.203)
C2: (2.226,-9.468,6.128)
C6: (3.972,-10.474,7.534)
C5: (3.572,-9.503,8.492)
C4: (2.553,-8.624,8.176)
P: (2.929,-7.267,14.552)
C4': (0.624,-6.125,11.573)
C2': (-0.006,-7.207,9.590)
O2': (-0.921,-6.251,9.085)
N1: (3.230,-10.387,6.353)
N2: (1.618,-9.523,4.935)
N3: (1.843,-8.554,7.016)
N7: (4.046,-9.261,9.777)
N9: (2.396,-7.815,9.287)
O5': (2.002,-7.249,13.246)
O3': (-1.416,-7.445,11.586)
OP2: (3.815,-8.453,14.470)
C3': (-0.083,-7.385,11.101)
C1': (1.435,-6.718,9.457)
C5': (1.121,-6.151,13.008)
O6: (4.853,-11.340,7.644)
O4': (1.731,-5.997,10.645)
C8: (3.324,-8.260,10.203)
C2: (2.226,-9.468,6.128)
C6: (3.972,-10.474,7.534)
C5: (3.572,-9.503,8.492)
C4: (2.553,-8.624,8.176)
P: (2.929,-7.267,14.552)
C4': (0.624,-6.125,11.573)
C2': (-0.006,-7.207,9.590)
O2': (-0.921,-6.251,9.085)
N1: (3.230,-10.387,6.353)
N2: (1.618,-9.523,4.935)
N3: (1.843,-8.554,7.016)
N7: (4.046,-9.261,9.777)
N9: (2.396,-7.815,9.287)
O5': (2.002,-7.249,13.246)
O3': (-1.416,-7.445,11.586)
Image (generated by PyMOL):