Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A19:A20
Extra
PDB:
ATOM 1 O3' A A 18 -0.041 -7.687 -38.624 1.00 56.13 O
ATOM 2 P U A 19 -0.090 -6.394 -39.575 1.00 54.42 P
ATOM 3 OP1 U A 19 -1.515 -6.000 -39.703 1.00 55.38 O
ATOM 4 OP2 U A 19 0.669 -6.728 -40.803 1.00 61.27 O
ATOM 5 O5' U A 19 0.702 -5.302 -38.729 1.00 47.49 O
ATOM 6 C5' U A 19 0.221 -4.867 -37.462 1.00 47.80 C
ATOM 7 C4' U A 19 1.000 -3.681 -36.947 1.00 51.47 C
ATOM 8 O4' U A 19 2.404 -4.042 -36.852 1.00 47.22 O
ATOM 9 C3' U A 19 0.936 -2.433 -37.822 1.00 56.70 C
ATOM 10 O3' U A 19 0.966 -1.270 -36.995 1.00 54.72 O
ATOM 11 C2' U A 19 2.222 -2.521 -38.639 1.00 52.51 C
ATOM 12 O2' U A 19 2.708 -1.280 -39.105 1.00 47.54 O
ATOM 13 C1' U A 19 3.186 -3.170 -37.647 1.00 47.84 C
ATOM 14 N1 U A 19 4.249 -3.974 -38.290 1.00 49.12 N
ATOM 15 C2 U A 19 5.559 -3.813 -37.880 1.00 45.41 C
ATOM 16 O2 U A 19 5.888 -3.032 -37.004 1.00 41.00 O
ATOM 17 N3 U A 19 6.471 -4.605 -38.536 1.00 46.67 N
ATOM 18 C4 U A 19 6.213 -5.522 -39.538 1.00 44.40 C
ATOM 19 O4 U A 19 7.142 -6.162 -40.034 1.00 46.11 O
ATOM 20 C5 U A 19 4.834 -5.629 -39.904 1.00 43.11 C
ATOM 21 C6 U A 19 3.927 -4.871 -39.282 1.00 50.94 C
ATOM 22 P A A 20 -0.403 -0.523 -36.606 1.00 50.62 P
ATOM 23 OP1 A A 20 -1.463 -1.558 -36.543 1.00 54.25 O
ATOM 24 OP2 A A 20 -0.568 0.609 -37.551 1.00 50.82 O
ATOM 25 O5' A A 20 -0.101 0.031 -35.146 1.00 47.83 O
TER
ATOM 1 O3' U B 19 0.966 -1.270 -36.995 1.00 54.72 O
ATOM 2 P A B 20 -0.403 -0.523 -36.606 1.00 50.62 P
ATOM 3 OP1 A B 20 -1.463 -1.558 -36.543 1.00 54.25 O
ATOM 4 OP2 A B 20 -0.568 0.609 -37.551 1.00 50.82 O
ATOM 5 O5' A B 20 -0.101 0.031 -35.146 1.00 47.83 O
ATOM 6 C5' A B 20 -0.584 -0.645 -33.991 1.00 47.13 C
ATOM 7 C4' A B 20 -0.499 0.227 -32.764 1.00 50.50 C
ATOM 8 O4' A B 20 0.897 0.526 -32.495 1.00 53.44 O
ATOM 9 C3' A B 20 -1.206 1.572 -32.880 1.00 49.07 C
ATOM 10 O3' A B 20 -1.699 1.962 -31.598 1.00 48.71 O
ATOM 11 C2' A B 20 -0.081 2.509 -33.309 1.00 46.25 C
ATOM 12 O2' A B 20 -0.289 3.868 -32.982 1.00 49.20 O
ATOM 13 C1' A B 20 1.119 1.923 -32.564 1.00 44.80 C
ATOM 14 N9 A B 20 2.404 2.140 -33.237 1.00 42.96 N
ATOM 15 C8 A B 20 2.900 1.461 -34.325 1.00 41.38 C
ATOM 16 N7 A B 20 4.087 1.863 -34.711 1.00 45.73 N
ATOM 17 C5 A B 20 4.401 2.877 -33.814 1.00 40.94 C
ATOM 18 C6 A B 20 5.524 3.714 -33.677 1.00 38.13 C
ATOM 19 N6 A B 20 6.595 3.670 -34.474 1.00 38.94 N
ATOM 20 N1 A B 20 5.515 4.618 -32.674 1.00 40.38 N
ATOM 21 C2 A B 20 4.448 4.674 -31.867 1.00 40.43 C
ATOM 22 N3 A B 20 3.337 3.944 -31.894 1.00 42.57 N
ATOM 23 C4 A B 20 3.375 3.054 -32.900 1.00 41.94 C
ATOM 24 P U B 21 -3.273 2.209 -31.382 1.00 60.82 P
ATOM 25 OP1 U B 21 -3.855 2.502 -32.715 1.00 58.24 O
ATOM 26 OP2 U B 21 -3.413 3.220 -30.306 1.00 55.62 O
ATOM 27 O5' U B 21 -3.792 0.794 -30.868 1.00 54.11 O
TER
ATOM 2 P U A 19 -0.090 -6.394 -39.575 1.00 54.42 P
ATOM 3 OP1 U A 19 -1.515 -6.000 -39.703 1.00 55.38 O
ATOM 4 OP2 U A 19 0.669 -6.728 -40.803 1.00 61.27 O
ATOM 5 O5' U A 19 0.702 -5.302 -38.729 1.00 47.49 O
ATOM 6 C5' U A 19 0.221 -4.867 -37.462 1.00 47.80 C
ATOM 7 C4' U A 19 1.000 -3.681 -36.947 1.00 51.47 C
ATOM 8 O4' U A 19 2.404 -4.042 -36.852 1.00 47.22 O
ATOM 9 C3' U A 19 0.936 -2.433 -37.822 1.00 56.70 C
ATOM 10 O3' U A 19 0.966 -1.270 -36.995 1.00 54.72 O
ATOM 11 C2' U A 19 2.222 -2.521 -38.639 1.00 52.51 C
ATOM 12 O2' U A 19 2.708 -1.280 -39.105 1.00 47.54 O
ATOM 13 C1' U A 19 3.186 -3.170 -37.647 1.00 47.84 C
ATOM 14 N1 U A 19 4.249 -3.974 -38.290 1.00 49.12 N
ATOM 15 C2 U A 19 5.559 -3.813 -37.880 1.00 45.41 C
ATOM 16 O2 U A 19 5.888 -3.032 -37.004 1.00 41.00 O
ATOM 17 N3 U A 19 6.471 -4.605 -38.536 1.00 46.67 N
ATOM 18 C4 U A 19 6.213 -5.522 -39.538 1.00 44.40 C
ATOM 19 O4 U A 19 7.142 -6.162 -40.034 1.00 46.11 O
ATOM 20 C5 U A 19 4.834 -5.629 -39.904 1.00 43.11 C
ATOM 21 C6 U A 19 3.927 -4.871 -39.282 1.00 50.94 C
ATOM 22 P A A 20 -0.403 -0.523 -36.606 1.00 50.62 P
ATOM 23 OP1 A A 20 -1.463 -1.558 -36.543 1.00 54.25 O
ATOM 24 OP2 A A 20 -0.568 0.609 -37.551 1.00 50.82 O
ATOM 25 O5' A A 20 -0.101 0.031 -35.146 1.00 47.83 O
TER
ATOM 1 O3' U B 19 0.966 -1.270 -36.995 1.00 54.72 O
ATOM 2 P A B 20 -0.403 -0.523 -36.606 1.00 50.62 P
ATOM 3 OP1 A B 20 -1.463 -1.558 -36.543 1.00 54.25 O
ATOM 4 OP2 A B 20 -0.568 0.609 -37.551 1.00 50.82 O
ATOM 5 O5' A B 20 -0.101 0.031 -35.146 1.00 47.83 O
ATOM 6 C5' A B 20 -0.584 -0.645 -33.991 1.00 47.13 C
ATOM 7 C4' A B 20 -0.499 0.227 -32.764 1.00 50.50 C
ATOM 8 O4' A B 20 0.897 0.526 -32.495 1.00 53.44 O
ATOM 9 C3' A B 20 -1.206 1.572 -32.880 1.00 49.07 C
ATOM 10 O3' A B 20 -1.699 1.962 -31.598 1.00 48.71 O
ATOM 11 C2' A B 20 -0.081 2.509 -33.309 1.00 46.25 C
ATOM 12 O2' A B 20 -0.289 3.868 -32.982 1.00 49.20 O
ATOM 13 C1' A B 20 1.119 1.923 -32.564 1.00 44.80 C
ATOM 14 N9 A B 20 2.404 2.140 -33.237 1.00 42.96 N
ATOM 15 C8 A B 20 2.900 1.461 -34.325 1.00 41.38 C
ATOM 16 N7 A B 20 4.087 1.863 -34.711 1.00 45.73 N
ATOM 17 C5 A B 20 4.401 2.877 -33.814 1.00 40.94 C
ATOM 18 C6 A B 20 5.524 3.714 -33.677 1.00 38.13 C
ATOM 19 N6 A B 20 6.595 3.670 -34.474 1.00 38.94 N
ATOM 20 N1 A B 20 5.515 4.618 -32.674 1.00 40.38 N
ATOM 21 C2 A B 20 4.448 4.674 -31.867 1.00 40.43 C
ATOM 22 N3 A B 20 3.337 3.944 -31.894 1.00 42.57 N
ATOM 23 C4 A B 20 3.375 3.054 -32.900 1.00 41.94 C
ATOM 24 P U B 21 -3.273 2.209 -31.382 1.00 60.82 P
ATOM 25 OP1 U B 21 -3.855 2.502 -32.715 1.00 58.24 O
ATOM 26 OP2 U B 21 -3.413 3.220 -30.306 1.00 55.62 O
ATOM 27 O5' U B 21 -3.792 0.794 -30.868 1.00 54.11 O
TER
Atoms:
C4: (6.213,-5.522,-39.538)
N3: (6.471,-4.605,-38.536)
OP1: (-1.515,-6.000,-39.703)
OP2: (0.669,-6.728,-40.803)
C2: (5.559,-3.813,-37.880)
C1': (3.186,-3.170,-37.647)
C3': (0.936,-2.433,-37.822)
O5': (0.702,-5.302,-38.729)
O4': (2.404,-4.042,-36.852)
C5': (0.221,-4.867,-37.462)
P: (-0.090,-6.394,-39.575)
C4': (1.000,-3.681,-36.947)
C2': (2.222,-2.521,-38.639)
O2': (2.708,-1.280,-39.105)
N1: (4.249,-3.974,-38.290)
O4: (7.142,-6.162,-40.034)
O2: (5.888,-3.032,-37.004)
C6: (3.927,-4.871,-39.282)
C5: (4.834,-5.629,-39.904)
O3': (0.966,-1.270,-36.995)
N3: (6.471,-4.605,-38.536)
OP1: (-1.515,-6.000,-39.703)
OP2: (0.669,-6.728,-40.803)
C2: (5.559,-3.813,-37.880)
C1': (3.186,-3.170,-37.647)
C3': (0.936,-2.433,-37.822)
O5': (0.702,-5.302,-38.729)
O4': (2.404,-4.042,-36.852)
C5': (0.221,-4.867,-37.462)
P: (-0.090,-6.394,-39.575)
C4': (1.000,-3.681,-36.947)
C2': (2.222,-2.521,-38.639)
O2': (2.708,-1.280,-39.105)
N1: (4.249,-3.974,-38.290)
O4: (7.142,-6.162,-40.034)
O2: (5.888,-3.032,-37.004)
C6: (3.927,-4.871,-39.282)
C5: (4.834,-5.629,-39.904)
O3': (0.966,-1.270,-36.995)
OP1: (-1.463,-1.558,-36.543)
OP2: (-0.568,0.609,-37.551)
C3': (-1.206,1.572,-32.880)
C1': (1.119,1.923,-32.564)
C5': (-0.584,-0.645,-33.991)
O4': (0.897,0.526,-32.495)
C8: (2.900,1.461,-34.325)
O2': (-0.289,3.868,-32.982)
C6: (5.524,3.714,-33.677)
C5: (4.401,2.877,-33.814)
C4: (3.375,3.054,-32.900)
P: (-0.403,-0.523,-36.606)
C4': (-0.499,0.227,-32.764)
C2': (-0.081,2.509,-33.309)
C2: (4.448,4.674,-31.867)
N1: (5.515,4.618,-32.674)
N3: (3.337,3.944,-31.894)
N6: (6.595,3.670,-34.474)
N7: (4.087,1.863,-34.711)
N9: (2.404,2.140,-33.237)
O5': (-0.101,0.031,-35.146)
O3': (-1.699,1.962,-31.598)
OP2: (-0.568,0.609,-37.551)
C3': (-1.206,1.572,-32.880)
C1': (1.119,1.923,-32.564)
C5': (-0.584,-0.645,-33.991)
O4': (0.897,0.526,-32.495)
C8: (2.900,1.461,-34.325)
O2': (-0.289,3.868,-32.982)
C6: (5.524,3.714,-33.677)
C5: (4.401,2.877,-33.814)
C4: (3.375,3.054,-32.900)
P: (-0.403,-0.523,-36.606)
C4': (-0.499,0.227,-32.764)
C2': (-0.081,2.509,-33.309)
C2: (4.448,4.674,-31.867)
N1: (5.515,4.618,-32.674)
N3: (3.337,3.944,-31.894)
N6: (6.595,3.670,-34.474)
N7: (4.087,1.863,-34.711)
N9: (2.404,2.140,-33.237)
O5': (-0.101,0.031,-35.146)
O3': (-1.699,1.962,-31.598)
Image (generated by PyMOL):