Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1313:1314
Extra
PDB:
ATOM 1 O3' C A 312 55.822 -54.085 123.486 1.00 47.87 O
ATOM 2 P U A 313 55.882 -53.795 125.065 1.00 56.46 P
ATOM 3 OP1 U A 313 56.650 -52.528 125.245 1.00 56.29 O
ATOM 4 OP2 U A 313 56.368 -55.042 125.737 1.00 57.11 O
ATOM 5 O5' U A 313 54.367 -53.553 125.421 1.00 56.35 O
ATOM 6 C5' U A 313 53.672 -52.437 124.901 1.00 55.79 C
ATOM 7 C4' U A 313 52.305 -52.362 125.479 1.00 55.84 C
ATOM 8 O4' U A 313 51.595 -53.607 125.182 1.00 55.98 O
ATOM 9 C3' U A 313 52.279 -52.245 126.983 1.00 56.37 C
ATOM 10 O3' U A 313 51.032 -51.691 127.340 1.00 56.24 O
ATOM 11 C2' U A 313 52.288 -53.706 127.376 1.00 56.90 C
ATOM 12 O2' U A 313 51.952 -53.965 128.706 1.00 57.45 O
ATOM 13 C1' U A 313 51.256 -54.240 126.396 1.00 56.57 C
ATOM 14 N1 U A 313 51.295 -55.704 126.199 1.00 56.90 N
ATOM 15 C2 U A 313 50.169 -56.471 126.436 1.00 57.09 C
ATOM 16 O2 U A 313 49.118 -56.007 126.799 1.00 57.00 O
ATOM 17 N3 U A 313 50.306 -57.818 126.251 1.00 57.42 N
ATOM 18 C4 U A 313 51.465 -58.464 125.864 1.00 57.58 C
ATOM 19 O4 U A 313 51.493 -59.681 125.729 1.00 57.90 O
ATOM 20 C5 U A 313 52.586 -57.624 125.629 1.00 57.36 C
ATOM 21 C6 U A 313 52.468 -56.304 125.809 1.00 57.04 C
ATOM 22 P A A 314 50.923 -50.395 128.262 1.00 51.28 P
ATOM 23 OP1 A A 314 52.275 -49.737 128.311 1.00 51.28 O
ATOM 24 OP2 A A 314 50.303 -50.837 129.480 1.00 51.80 O
ATOM 25 O5' A A 314 49.920 -49.496 127.443 1.00 50.65 O
TER
ATOM 1 O3' U B 313 51.032 -51.691 127.340 1.00 56.24 O
ATOM 2 P A B 314 50.923 -50.395 128.262 1.00 51.28 P
ATOM 3 OP1 A B 314 52.275 -49.737 128.311 1.00 51.28 O
ATOM 4 OP2 A B 314 50.303 -50.837 129.480 1.00 51.80 O
ATOM 5 O5' A B 314 49.920 -49.496 127.443 1.00 50.65 O
ATOM 6 C5' A B 314 50.225 -49.146 126.106 1.00 50.09 C
ATOM 7 C4' A B 314 49.146 -48.319 125.518 1.00 49.58 C
ATOM 8 O4' A B 314 48.117 -49.188 124.985 1.00 49.49 O
ATOM 9 C3' A B 314 48.427 -47.406 126.497 1.00 49.67 C
ATOM 10 O3' A B 314 49.059 -46.134 126.625 1.00 49.49 O
ATOM 11 C2' A B 314 47.035 -47.308 125.909 1.00 49.32 C
ATOM 12 O2' A B 314 47.049 -46.344 124.877 1.00 48.72 O
ATOM 13 C1' A B 314 46.851 -48.685 125.283 1.00 49.38 C
ATOM 14 N9 A B 314 46.185 -49.659 126.175 1.00 49.89 N
ATOM 15 C8 A B 314 46.799 -50.702 126.776 1.00 50.41 C
ATOM 16 N7 A B 314 46.022 -51.501 127.446 1.00 50.80 N
ATOM 17 C5 A B 314 44.811 -50.954 127.258 1.00 50.51 C
ATOM 18 C6 A B 314 43.593 -51.335 127.722 1.00 50.70 C
ATOM 19 N6 A B 314 43.417 -52.397 128.488 1.00 51.24 N
ATOM 20 N1 A B 314 42.530 -50.592 127.364 1.00 50.31 N
ATOM 21 C2 A B 314 42.677 -49.538 126.570 1.00 49.77 C
ATOM 22 N3 A B 314 43.813 -49.089 126.091 1.00 49.56 N
ATOM 23 C4 A B 314 44.860 -49.847 126.479 1.00 49.95 C
ATOM 24 P A B 315 48.645 -45.171 127.836 1.00 50.35 P
ATOM 25 OP1 A B 315 49.268 -43.832 127.631 1.00 50.05 O
ATOM 26 OP2 A B 315 48.949 -45.927 129.111 1.00 51.04 O
ATOM 27 O5' A B 315 47.096 -45.048 127.647 1.00 50.13 O
TER
ATOM 2 P U A 313 55.882 -53.795 125.065 1.00 56.46 P
ATOM 3 OP1 U A 313 56.650 -52.528 125.245 1.00 56.29 O
ATOM 4 OP2 U A 313 56.368 -55.042 125.737 1.00 57.11 O
ATOM 5 O5' U A 313 54.367 -53.553 125.421 1.00 56.35 O
ATOM 6 C5' U A 313 53.672 -52.437 124.901 1.00 55.79 C
ATOM 7 C4' U A 313 52.305 -52.362 125.479 1.00 55.84 C
ATOM 8 O4' U A 313 51.595 -53.607 125.182 1.00 55.98 O
ATOM 9 C3' U A 313 52.279 -52.245 126.983 1.00 56.37 C
ATOM 10 O3' U A 313 51.032 -51.691 127.340 1.00 56.24 O
ATOM 11 C2' U A 313 52.288 -53.706 127.376 1.00 56.90 C
ATOM 12 O2' U A 313 51.952 -53.965 128.706 1.00 57.45 O
ATOM 13 C1' U A 313 51.256 -54.240 126.396 1.00 56.57 C
ATOM 14 N1 U A 313 51.295 -55.704 126.199 1.00 56.90 N
ATOM 15 C2 U A 313 50.169 -56.471 126.436 1.00 57.09 C
ATOM 16 O2 U A 313 49.118 -56.007 126.799 1.00 57.00 O
ATOM 17 N3 U A 313 50.306 -57.818 126.251 1.00 57.42 N
ATOM 18 C4 U A 313 51.465 -58.464 125.864 1.00 57.58 C
ATOM 19 O4 U A 313 51.493 -59.681 125.729 1.00 57.90 O
ATOM 20 C5 U A 313 52.586 -57.624 125.629 1.00 57.36 C
ATOM 21 C6 U A 313 52.468 -56.304 125.809 1.00 57.04 C
ATOM 22 P A A 314 50.923 -50.395 128.262 1.00 51.28 P
ATOM 23 OP1 A A 314 52.275 -49.737 128.311 1.00 51.28 O
ATOM 24 OP2 A A 314 50.303 -50.837 129.480 1.00 51.80 O
ATOM 25 O5' A A 314 49.920 -49.496 127.443 1.00 50.65 O
TER
ATOM 1 O3' U B 313 51.032 -51.691 127.340 1.00 56.24 O
ATOM 2 P A B 314 50.923 -50.395 128.262 1.00 51.28 P
ATOM 3 OP1 A B 314 52.275 -49.737 128.311 1.00 51.28 O
ATOM 4 OP2 A B 314 50.303 -50.837 129.480 1.00 51.80 O
ATOM 5 O5' A B 314 49.920 -49.496 127.443 1.00 50.65 O
ATOM 6 C5' A B 314 50.225 -49.146 126.106 1.00 50.09 C
ATOM 7 C4' A B 314 49.146 -48.319 125.518 1.00 49.58 C
ATOM 8 O4' A B 314 48.117 -49.188 124.985 1.00 49.49 O
ATOM 9 C3' A B 314 48.427 -47.406 126.497 1.00 49.67 C
ATOM 10 O3' A B 314 49.059 -46.134 126.625 1.00 49.49 O
ATOM 11 C2' A B 314 47.035 -47.308 125.909 1.00 49.32 C
ATOM 12 O2' A B 314 47.049 -46.344 124.877 1.00 48.72 O
ATOM 13 C1' A B 314 46.851 -48.685 125.283 1.00 49.38 C
ATOM 14 N9 A B 314 46.185 -49.659 126.175 1.00 49.89 N
ATOM 15 C8 A B 314 46.799 -50.702 126.776 1.00 50.41 C
ATOM 16 N7 A B 314 46.022 -51.501 127.446 1.00 50.80 N
ATOM 17 C5 A B 314 44.811 -50.954 127.258 1.00 50.51 C
ATOM 18 C6 A B 314 43.593 -51.335 127.722 1.00 50.70 C
ATOM 19 N6 A B 314 43.417 -52.397 128.488 1.00 51.24 N
ATOM 20 N1 A B 314 42.530 -50.592 127.364 1.00 50.31 N
ATOM 21 C2 A B 314 42.677 -49.538 126.570 1.00 49.77 C
ATOM 22 N3 A B 314 43.813 -49.089 126.091 1.00 49.56 N
ATOM 23 C4 A B 314 44.860 -49.847 126.479 1.00 49.95 C
ATOM 24 P A B 315 48.645 -45.171 127.836 1.00 50.35 P
ATOM 25 OP1 A B 315 49.268 -43.832 127.631 1.00 50.05 O
ATOM 26 OP2 A B 315 48.949 -45.927 129.111 1.00 51.04 O
ATOM 27 O5' A B 315 47.096 -45.048 127.647 1.00 50.13 O
TER
Atoms:
C4: (51.465,-58.464,125.864)
N3: (50.306,-57.818,126.251)
OP1: (56.650,-52.528,125.245)
OP2: (56.368,-55.042,125.737)
C2: (50.169,-56.471,126.436)
C1': (51.256,-54.240,126.396)
C3': (52.279,-52.245,126.983)
O5': (54.367,-53.553,125.421)
O4': (51.595,-53.607,125.182)
C5': (53.672,-52.437,124.901)
P: (55.882,-53.795,125.065)
C4': (52.305,-52.362,125.479)
C2': (52.288,-53.706,127.376)
O2': (51.952,-53.965,128.706)
N1: (51.295,-55.704,126.199)
O4: (51.493,-59.681,125.729)
O2: (49.118,-56.007,126.799)
C6: (52.468,-56.304,125.809)
C5: (52.586,-57.624,125.629)
O3': (51.032,-51.691,127.340)
N3: (50.306,-57.818,126.251)
OP1: (56.650,-52.528,125.245)
OP2: (56.368,-55.042,125.737)
C2: (50.169,-56.471,126.436)
C1': (51.256,-54.240,126.396)
C3': (52.279,-52.245,126.983)
O5': (54.367,-53.553,125.421)
O4': (51.595,-53.607,125.182)
C5': (53.672,-52.437,124.901)
P: (55.882,-53.795,125.065)
C4': (52.305,-52.362,125.479)
C2': (52.288,-53.706,127.376)
O2': (51.952,-53.965,128.706)
N1: (51.295,-55.704,126.199)
O4: (51.493,-59.681,125.729)
O2: (49.118,-56.007,126.799)
C6: (52.468,-56.304,125.809)
C5: (52.586,-57.624,125.629)
O3': (51.032,-51.691,127.340)
OP1: (52.275,-49.737,128.311)
OP2: (50.303,-50.837,129.480)
C3': (48.427,-47.406,126.497)
C1': (46.851,-48.685,125.283)
C5': (50.225,-49.146,126.106)
O4': (48.117,-49.188,124.985)
C8: (46.799,-50.702,126.776)
O2': (47.049,-46.344,124.877)
C6: (43.593,-51.335,127.722)
C5: (44.811,-50.954,127.258)
C4: (44.860,-49.847,126.479)
P: (50.923,-50.395,128.262)
C4': (49.146,-48.319,125.518)
C2': (47.035,-47.308,125.909)
C2: (42.677,-49.538,126.570)
N1: (42.530,-50.592,127.364)
N3: (43.813,-49.089,126.091)
N6: (43.417,-52.397,128.488)
N7: (46.022,-51.501,127.446)
N9: (46.185,-49.659,126.175)
O5': (49.920,-49.496,127.443)
O3': (49.059,-46.134,126.625)
OP2: (50.303,-50.837,129.480)
C3': (48.427,-47.406,126.497)
C1': (46.851,-48.685,125.283)
C5': (50.225,-49.146,126.106)
O4': (48.117,-49.188,124.985)
C8: (46.799,-50.702,126.776)
O2': (47.049,-46.344,124.877)
C6: (43.593,-51.335,127.722)
C5: (44.811,-50.954,127.258)
C4: (44.860,-49.847,126.479)
P: (50.923,-50.395,128.262)
C4': (49.146,-48.319,125.518)
C2': (47.035,-47.308,125.909)
C2: (42.677,-49.538,126.570)
N1: (42.530,-50.592,127.364)
N3: (43.813,-49.089,126.091)
N6: (43.417,-52.397,128.488)
N7: (46.022,-51.501,127.446)
N9: (46.185,-49.659,126.175)
O5': (49.920,-49.496,127.443)
O3': (49.059,-46.134,126.625)
Image (generated by PyMOL):