ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A48:A78

Extra

PDB:
ATOM 1 O3' C A 47 49.950 171.237 39.707 1.00 58.81 O
ATOM 2 P C A 48 50.623 170.233 40.738 1.00 63.17 P
ATOM 3 OP1 C A 48 51.942 170.801 41.117 1.00 63.89 O
ATOM 4 OP2 C A 48 50.543 168.858 40.189 1.00 63.69 O
ATOM 5 O5' C A 48 49.650 170.314 41.984 1.00 62.57 O
ATOM 6 C5' C A 48 49.519 171.532 42.706 1.00 63.97 C
ATOM 7 C4' C A 48 48.487 171.371 43.772 1.00 65.29 C
ATOM 8 O4' C A 48 47.188 171.201 43.167 1.00 64.98 O
ATOM 9 C3' C A 48 48.636 170.102 44.584 1.00 66.44 C
ATOM 10 O3' C A 48 49.656 170.220 45.549 1.00 68.42 O
ATOM 11 C2' C A 48 47.258 169.958 45.199 1.00 66.35 C
ATOM 12 O2' C A 48 47.077 170.806 46.321 1.00 67.17 O
ATOM 13 C1' C A 48 46.383 170.416 44.030 1.00 64.95 C
ATOM 14 N1 C A 48 45.796 169.301 43.269 1.00 63.11 N
ATOM 15 C2 C A 48 44.500 168.913 43.584 1.00 62.70 C
ATOM 16 O2 C A 48 43.906 169.514 44.491 1.00 62.85 O
ATOM 17 N3 C A 48 43.925 167.891 42.904 1.00 62.42 N
ATOM 18 C4 C A 48 44.612 167.261 41.947 1.00 63.23 C
ATOM 19 N4 C A 48 44.014 166.244 41.299 1.00 62.88 N
ATOM 20 C5 C A 48 45.946 167.640 41.607 1.00 62.75 C
ATOM 21 C6 C A 48 46.493 168.655 42.285 1.00 62.69 C
ATOM 22 P A A 49 50.922 169.245 45.464 1.00 70.30 P
ATOM 23 OP1 A A 49 51.670 169.401 46.746 1.00 70.60 O
ATOM 24 OP2 A A 49 51.618 169.489 44.168 1.00 70.42 O
ATOM 25 O5' A A 49 50.274 167.790 45.399 1.00 67.74 O
TER

ATOM 1 O3' C B 77 32.706 162.260 44.040 1.00 81.37 O
ATOM 2 P G B 78 32.772 163.784 43.568 1.00 79.11 P
ATOM 3 OP1 G B 78 31.410 164.174 43.114 1.00 79.77 O
ATOM 4 OP2 G B 78 33.919 163.904 42.631 1.00 78.70 O
ATOM 5 O5' G B 78 33.117 164.582 44.904 1.00 77.41 O
ATOM 6 C5' G B 78 34.429 164.484 45.501 1.00 73.87 C
ATOM 7 C4' G B 78 34.796 165.772 46.204 1.00 71.25 C
ATOM 8 O4' G B 78 36.131 165.657 46.761 1.00 69.50 O
ATOM 9 C3' G B 78 34.819 167.000 45.310 1.00 71.06 C
ATOM 10 O3' G B 78 33.551 167.627 45.428 1.00 72.94 O
ATOM 11 C2' G B 78 35.985 167.821 45.858 1.00 69.12 C
ATOM 12 O2' G B 78 35.643 168.599 46.986 1.00 69.61 O
ATOM 13 C1' G B 78 36.951 166.708 46.278 1.00 66.50 C
ATOM 14 N9 G B 78 37.778 166.184 45.186 1.00 61.62 N
ATOM 15 C8 G B 78 37.512 165.109 44.372 1.00 59.05 C
ATOM 16 N7 G B 78 38.412 164.935 43.445 1.00 57.83 N
ATOM 17 C5 G B 78 39.335 165.946 43.663 1.00 58.07 C
ATOM 18 C6 G B 78 40.521 166.286 42.949 1.00 58.43 C
ATOM 19 O6 G B 78 40.970 165.782 41.910 1.00 58.60 O
ATOM 20 N1 G B 78 41.187 167.353 43.545 1.00 57.96 N
ATOM 21 C2 G B 78 40.748 168.028 44.659 1.00 58.45 C
ATOM 22 N2 G B 78 41.529 169.010 45.107 1.00 57.90 N
ATOM 23 N3 G B 78 39.624 167.752 45.295 1.00 58.95 N
ATOM 24 C4 G B 78 38.976 166.705 44.751 1.00 59.18 C
ATOM 25 P G B 79 33.084 168.712 44.353 1.00 74.36 P
ATOM 26 OP1 G B 79 31.820 169.242 44.944 1.00 73.16 O
ATOM 27 OP2 G B 79 33.072 168.112 42.987 1.00 72.56 O
ATOM 28 O5' G B 79 34.230 169.825 44.379 1.00 73.80 O
TER

Atoms:
C2: (44.500,168.913,43.584)
OP1: (51.942,170.801,41.117)
OP2: (50.543,168.858,40.189)
C4: (44.612,167.261,41.947)
O5': (49.650,170.314,41.984)
C3': (48.636,170.102,44.584)
C1': (46.383,170.416,44.030)
O4': (47.188,171.201,43.167)
C5': (49.519,171.532,42.706)
P: (50.623,170.233,40.738)
O2: (43.906,169.514,44.491)
C4': (48.487,171.371,43.772)
C2': (47.258,169.958,45.199)
O2': (47.077,170.806,46.321)
N1: (45.796,169.301,43.269)
N3: (43.925,167.891,42.904)
N4: (44.014,166.244,41.299)
C6: (46.493,168.655,42.285)
C5: (45.946,167.640,41.607)
O3': (49.656,170.220,45.549)
OP1: (31.410,164.174,43.114)
OP2: (33.919,163.904,42.631)
C3': (34.819,167.000,45.310)
C1': (36.951,166.708,46.278)
C5': (34.429,164.484,45.501)
O6: (40.970,165.782,41.910)
O4': (36.131,165.657,46.761)
C8: (37.512,165.109,44.372)
C2: (40.748,168.028,44.659)
C6: (40.521,166.286,42.949)
C5: (39.335,165.946,43.663)
C4: (38.976,166.705,44.751)
P: (32.772,163.784,43.568)
C4': (34.796,165.772,46.204)
C2': (35.985,167.821,45.858)
O2': (35.643,168.599,46.986)
N1: (41.187,167.353,43.545)
N2: (41.529,169.010,45.107)
N3: (39.624,167.752,45.295)
N7: (38.412,164.935,43.445)
N9: (37.778,166.184,45.186)
O5': (33.117,164.582,44.904)
O3': (33.551,167.627,45.428)
Image (generated by PyMOL):
PyMOL image
show in jmol