Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1784:A1925
Extra
PDB:
ATOM 1 O3' U A1783 106.249 132.570 109.437 1.00 46.20 O
ATOM 2 P C A1784 106.593 132.430 107.872 1.00 43.76 P
ATOM 3 OP1 C A1784 107.401 131.197 107.709 1.00 42.51 O
ATOM 4 OP2 C A1784 107.091 133.713 107.331 1.00 42.88 O
ATOM 5 O5' C A1784 105.182 132.227 107.181 1.00 45.26 O
ATOM 6 C5' C A1784 104.431 131.023 107.349 1.00 46.35 C
ATOM 7 C4' C A1784 103.302 131.003 106.352 1.00 46.41 C
ATOM 8 O4' C A1784 102.331 132.041 106.667 1.00 46.76 O
ATOM 9 C3' C A1784 103.697 131.322 104.918 1.00 45.77 C
ATOM 10 O3' C A1784 104.276 130.183 104.271 1.00 45.26 O
ATOM 11 C2' C A1784 102.343 131.683 104.330 1.00 46.40 C
ATOM 12 O2' C A1784 101.579 130.510 104.225 1.00 47.67 O
ATOM 13 C1' C A1784 101.719 132.490 105.471 1.00 47.49 C
ATOM 14 N1 C A1784 101.992 133.922 105.288 1.00 49.35 N
ATOM 15 C2 C A1784 101.197 134.651 104.394 1.00 49.93 C
ATOM 16 O2 C A1784 100.166 134.136 103.948 1.00 50.33 O
ATOM 17 N3 C A1784 101.569 135.904 104.063 1.00 50.67 N
ATOM 18 C4 C A1784 102.656 136.447 104.619 1.00 50.18 C
ATOM 19 N4 C A1784 103.044 137.644 104.185 1.00 50.65 N
ATOM 20 C5 C A1784 103.405 135.776 105.619 1.00 49.54 C
ATOM 21 C6 C A1784 103.042 134.527 105.924 1.00 50.00 C
ATOM 22 P G A1785 105.215 130.382 102.974 1.00 45.19 P
ATOM 23 OP1 G A1785 105.674 129.055 102.453 1.00 45.78 O
ATOM 24 OP2 G A1785 106.221 131.420 103.288 1.00 47.34 O
ATOM 25 O5' G A1785 104.243 131.015 101.890 1.00 43.30 O
TER
ATOM 1 O3' A B1924 101.860 125.537 106.834 1.00 52.85 O
ATOM 2 P G B1925 101.186 127.005 106.770 1.00 51.78 P
ATOM 3 OP1 G B1925 102.217 127.881 106.171 1.00 52.87 O
ATOM 4 OP2 G B1925 100.557 127.388 108.058 1.00 51.36 O
ATOM 5 O5' G B1925 100.009 126.871 105.720 1.00 52.03 O
ATOM 6 C5' G B1925 98.645 126.886 106.153 1.00 53.47 C
ATOM 7 C4' G B1925 97.778 126.263 105.100 1.00 53.15 C
ATOM 8 O4' G B1925 97.630 127.170 104.002 1.00 52.09 O
ATOM 9 C3' G B1925 98.380 125.001 104.511 1.00 53.96 C
ATOM 10 O3' G B1925 98.118 123.936 105.454 1.00 54.49 O
ATOM 11 C2' G B1925 97.929 124.999 103.038 1.00 53.05 C
ATOM 12 O2' G B1925 96.983 124.058 102.585 1.00 55.79 O
ATOM 13 C1' G B1925 97.412 126.429 102.837 1.00 52.27 C
ATOM 14 N9 G B1925 98.013 127.156 101.736 1.00 52.01 N
ATOM 15 C8 G B1925 99.346 127.395 101.508 1.00 52.43 C
ATOM 16 N7 G B1925 99.566 128.020 100.383 1.00 51.92 N
ATOM 17 C5 G B1925 98.295 128.218 99.854 1.00 50.33 C
ATOM 18 C6 G B1925 97.882 128.814 98.650 1.00 48.58 C
ATOM 19 O6 G B1925 98.566 129.320 97.768 1.00 50.31 O
ATOM 20 N1 G B1925 96.508 128.788 98.514 1.00 47.85 N
ATOM 21 C2 G B1925 95.633 128.266 99.417 1.00 48.62 C
ATOM 22 N2 G B1925 94.330 128.332 99.087 1.00 48.54 N
ATOM 23 N3 G B1925 95.997 127.714 100.549 1.00 49.84 N
ATOM 24 C4 G B1925 97.333 127.713 100.696 1.00 51.26 C
ATOM 25 P U B1926 97.460 122.545 105.005 1.00 54.48 P
ATOM 26 OP1 U B1926 96.159 122.852 104.382 1.00 54.25 O
ATOM 27 OP2 U B1926 97.501 121.694 106.213 1.00 54.62 O
ATOM 28 O5' U B1926 98.477 121.914 103.954 1.00 54.87 O
TER
ATOM 2 P C A1784 106.593 132.430 107.872 1.00 43.76 P
ATOM 3 OP1 C A1784 107.401 131.197 107.709 1.00 42.51 O
ATOM 4 OP2 C A1784 107.091 133.713 107.331 1.00 42.88 O
ATOM 5 O5' C A1784 105.182 132.227 107.181 1.00 45.26 O
ATOM 6 C5' C A1784 104.431 131.023 107.349 1.00 46.35 C
ATOM 7 C4' C A1784 103.302 131.003 106.352 1.00 46.41 C
ATOM 8 O4' C A1784 102.331 132.041 106.667 1.00 46.76 O
ATOM 9 C3' C A1784 103.697 131.322 104.918 1.00 45.77 C
ATOM 10 O3' C A1784 104.276 130.183 104.271 1.00 45.26 O
ATOM 11 C2' C A1784 102.343 131.683 104.330 1.00 46.40 C
ATOM 12 O2' C A1784 101.579 130.510 104.225 1.00 47.67 O
ATOM 13 C1' C A1784 101.719 132.490 105.471 1.00 47.49 C
ATOM 14 N1 C A1784 101.992 133.922 105.288 1.00 49.35 N
ATOM 15 C2 C A1784 101.197 134.651 104.394 1.00 49.93 C
ATOM 16 O2 C A1784 100.166 134.136 103.948 1.00 50.33 O
ATOM 17 N3 C A1784 101.569 135.904 104.063 1.00 50.67 N
ATOM 18 C4 C A1784 102.656 136.447 104.619 1.00 50.18 C
ATOM 19 N4 C A1784 103.044 137.644 104.185 1.00 50.65 N
ATOM 20 C5 C A1784 103.405 135.776 105.619 1.00 49.54 C
ATOM 21 C6 C A1784 103.042 134.527 105.924 1.00 50.00 C
ATOM 22 P G A1785 105.215 130.382 102.974 1.00 45.19 P
ATOM 23 OP1 G A1785 105.674 129.055 102.453 1.00 45.78 O
ATOM 24 OP2 G A1785 106.221 131.420 103.288 1.00 47.34 O
ATOM 25 O5' G A1785 104.243 131.015 101.890 1.00 43.30 O
TER
ATOM 1 O3' A B1924 101.860 125.537 106.834 1.00 52.85 O
ATOM 2 P G B1925 101.186 127.005 106.770 1.00 51.78 P
ATOM 3 OP1 G B1925 102.217 127.881 106.171 1.00 52.87 O
ATOM 4 OP2 G B1925 100.557 127.388 108.058 1.00 51.36 O
ATOM 5 O5' G B1925 100.009 126.871 105.720 1.00 52.03 O
ATOM 6 C5' G B1925 98.645 126.886 106.153 1.00 53.47 C
ATOM 7 C4' G B1925 97.778 126.263 105.100 1.00 53.15 C
ATOM 8 O4' G B1925 97.630 127.170 104.002 1.00 52.09 O
ATOM 9 C3' G B1925 98.380 125.001 104.511 1.00 53.96 C
ATOM 10 O3' G B1925 98.118 123.936 105.454 1.00 54.49 O
ATOM 11 C2' G B1925 97.929 124.999 103.038 1.00 53.05 C
ATOM 12 O2' G B1925 96.983 124.058 102.585 1.00 55.79 O
ATOM 13 C1' G B1925 97.412 126.429 102.837 1.00 52.27 C
ATOM 14 N9 G B1925 98.013 127.156 101.736 1.00 52.01 N
ATOM 15 C8 G B1925 99.346 127.395 101.508 1.00 52.43 C
ATOM 16 N7 G B1925 99.566 128.020 100.383 1.00 51.92 N
ATOM 17 C5 G B1925 98.295 128.218 99.854 1.00 50.33 C
ATOM 18 C6 G B1925 97.882 128.814 98.650 1.00 48.58 C
ATOM 19 O6 G B1925 98.566 129.320 97.768 1.00 50.31 O
ATOM 20 N1 G B1925 96.508 128.788 98.514 1.00 47.85 N
ATOM 21 C2 G B1925 95.633 128.266 99.417 1.00 48.62 C
ATOM 22 N2 G B1925 94.330 128.332 99.087 1.00 48.54 N
ATOM 23 N3 G B1925 95.997 127.714 100.549 1.00 49.84 N
ATOM 24 C4 G B1925 97.333 127.713 100.696 1.00 51.26 C
ATOM 25 P U B1926 97.460 122.545 105.005 1.00 54.48 P
ATOM 26 OP1 U B1926 96.159 122.852 104.382 1.00 54.25 O
ATOM 27 OP2 U B1926 97.501 121.694 106.213 1.00 54.62 O
ATOM 28 O5' U B1926 98.477 121.914 103.954 1.00 54.87 O
TER
Atoms:
C2: (101.197,134.651,104.394)
OP1: (107.401,131.197,107.709)
OP2: (107.091,133.713,107.331)
C4: (102.656,136.447,104.619)
O5': (105.182,132.227,107.181)
C3': (103.697,131.322,104.918)
C1': (101.719,132.490,105.471)
O4': (102.331,132.041,106.667)
C5': (104.431,131.023,107.349)
P: (106.593,132.430,107.872)
O2: (100.166,134.136,103.948)
C4': (103.302,131.003,106.352)
C2': (102.343,131.683,104.330)
O2': (101.579,130.510,104.225)
N1: (101.992,133.922,105.288)
N3: (101.569,135.904,104.063)
N4: (103.044,137.644,104.185)
C6: (103.042,134.527,105.924)
C5: (103.405,135.776,105.619)
O3': (104.276,130.183,104.271)
OP1: (107.401,131.197,107.709)
OP2: (107.091,133.713,107.331)
C4: (102.656,136.447,104.619)
O5': (105.182,132.227,107.181)
C3': (103.697,131.322,104.918)
C1': (101.719,132.490,105.471)
O4': (102.331,132.041,106.667)
C5': (104.431,131.023,107.349)
P: (106.593,132.430,107.872)
O2: (100.166,134.136,103.948)
C4': (103.302,131.003,106.352)
C2': (102.343,131.683,104.330)
O2': (101.579,130.510,104.225)
N1: (101.992,133.922,105.288)
N3: (101.569,135.904,104.063)
N4: (103.044,137.644,104.185)
C6: (103.042,134.527,105.924)
C5: (103.405,135.776,105.619)
O3': (104.276,130.183,104.271)
OP1: (102.217,127.881,106.171)
OP2: (100.557,127.388,108.058)
C3': (98.380,125.001,104.511)
C1': (97.412,126.429,102.837)
C5': (98.645,126.886,106.153)
O6: (98.566,129.320,97.768)
O4': (97.630,127.170,104.002)
C8: (99.346,127.395,101.508)
C2: (95.633,128.266,99.417)
C6: (97.882,128.814,98.650)
C5: (98.295,128.218,99.854)
C4: (97.333,127.713,100.696)
P: (101.186,127.005,106.770)
C4': (97.778,126.263,105.100)
C2': (97.929,124.999,103.038)
O2': (96.983,124.058,102.585)
N1: (96.508,128.788,98.514)
N2: (94.330,128.332,99.087)
N3: (95.997,127.714,100.549)
N7: (99.566,128.020,100.383)
N9: (98.013,127.156,101.736)
O5': (100.009,126.871,105.720)
O3': (98.118,123.936,105.454)
OP2: (100.557,127.388,108.058)
C3': (98.380,125.001,104.511)
C1': (97.412,126.429,102.837)
C5': (98.645,126.886,106.153)
O6: (98.566,129.320,97.768)
O4': (97.630,127.170,104.002)
C8: (99.346,127.395,101.508)
C2: (95.633,128.266,99.417)
C6: (97.882,128.814,98.650)
C5: (98.295,128.218,99.854)
C4: (97.333,127.713,100.696)
P: (101.186,127.005,106.770)
C4': (97.778,126.263,105.100)
C2': (97.929,124.999,103.038)
O2': (96.983,124.058,102.585)
N1: (96.508,128.788,98.514)
N2: (94.330,128.332,99.087)
N3: (95.997,127.714,100.549)
N7: (99.566,128.020,100.383)
N9: (98.013,127.156,101.736)
O5': (100.009,126.871,105.720)
O3': (98.118,123.936,105.454)
Image (generated by PyMOL):