ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2FD0:A12:B11

Extra

PDB:
ATOM 1 O3' G A 11 15.994 -43.259 2.787 1.00 37.66 O
ATOM 2 P C A 12 16.097 -41.662 2.850 1.00 35.71 P
ATOM 3 OP1 C A 12 17.267 -41.212 2.055 1.00 39.96 O
ATOM 4 OP2 C A 12 15.982 -41.273 4.272 1.00 38.57 O
ATOM 5 O5' C A 12 14.775 -41.184 2.108 1.00 37.31 O
ATOM 6 C5' C A 12 14.607 -41.401 0.709 1.00 36.38 C
ATOM 7 C4' C A 12 13.222 -40.989 0.290 1.00 35.04 C
ATOM 8 O4' C A 12 12.254 -41.853 0.941 1.00 33.74 O
ATOM 9 C3' C A 12 12.788 -39.593 0.705 1.00 33.90 C
ATOM 10 O3' C A 12 13.288 -38.580 -0.170 1.00 37.30 O
ATOM 11 C2' C A 12 11.274 -39.719 0.626 1.00 33.23 C
ATOM 12 O2' C A 12 10.844 -39.773 -0.713 1.00 33.38 O
ATOM 13 C1' C A 12 11.068 -41.114 1.210 1.00 32.61 C
ATOM 14 N1 C A 12 10.854 -41.065 2.663 1.00 31.69 N
ATOM 15 C2 C A 12 9.556 -40.886 3.133 1.00 32.68 C
ATOM 16 O2 C A 12 8.638 -40.767 2.310 1.00 31.61 O
ATOM 17 N3 C A 12 9.332 -40.840 4.459 1.00 30.95 N
ATOM 18 C4 C A 12 10.356 -40.952 5.314 1.00 33.79 C
ATOM 19 N4 C A 12 10.092 -40.890 6.631 1.00 30.72 N
ATOM 20 C5 C A 12 11.696 -41.131 4.861 1.00 31.02 C
ATOM 21 C6 C A 12 11.895 -41.182 3.540 1.00 30.30 C
ATOM 22 P A A 13 13.608 -37.114 0.416 1.00 38.99 P
ATOM 23 OP1 A A 13 14.135 -36.285 -0.700 1.00 39.75 O
ATOM 24 OP2 A A 13 14.413 -37.258 1.660 1.00 39.35 O
ATOM 25 O5' A A 13 12.195 -36.549 0.895 1.00 38.41 O
TER

ATOM 1 O3' U B 10 -0.349 -38.493 11.370 1.00 38.45 O
ATOM 2 P G B 11 -0.430 -40.013 10.845 1.00 41.07 P
ATOM 3 OP1 G B 11 -1.827 -40.467 11.000 1.00 41.92 O
ATOM 4 OP2 G B 11 0.667 -40.803 11.469 1.00 40.49 O
ATOM 5 O5' G B 11 -0.068 -39.907 9.297 1.00 40.06 O
ATOM 6 C5' G B 11 -0.987 -39.336 8.359 1.00 40.76 C
ATOM 7 C4' G B 11 -0.426 -39.420 6.957 1.00 39.58 C
ATOM 8 O4' G B 11 0.782 -38.616 6.860 1.00 39.57 O
ATOM 9 C3' G B 11 0.017 -40.793 6.486 1.00 40.07 C
ATOM 10 O3' G B 11 -1.083 -41.581 6.037 1.00 37.87 O
ATOM 11 C2' G B 11 0.950 -40.430 5.346 1.00 39.62 C
ATOM 12 O2' G B 11 0.202 -40.056 4.206 1.00 40.10 O
ATOM 13 C1' G B 11 1.665 -39.208 5.925 1.00 38.59 C
ATOM 14 N9 G B 11 2.902 -39.560 6.620 1.00 37.66 N
ATOM 15 C8 G B 11 3.089 -39.720 7.971 1.00 35.78 C
ATOM 16 N7 G B 11 4.317 -40.052 8.284 1.00 37.00 N
ATOM 17 C5 G B 11 4.977 -40.112 7.065 1.00 35.43 C
ATOM 18 C6 G B 11 6.335 -40.430 6.758 1.00 36.19 C
ATOM 19 O6 G B 11 7.268 -40.721 7.535 1.00 32.22 O
ATOM 20 N1 G B 11 6.570 -40.384 5.388 1.00 33.44 N
ATOM 21 C2 G B 11 5.637 -40.072 4.432 1.00 35.05 C
ATOM 22 N2 G B 11 6.064 -40.095 3.159 1.00 34.90 N
ATOM 23 N3 G B 11 4.374 -39.764 4.702 1.00 35.01 N
ATOM 24 C4 G B 11 4.116 -39.808 6.027 1.00 36.28 C
ATOM 25 P C B 12 -1.046 -43.178 6.209 1.00 39.08 P
ATOM 26 OP1 C B 12 -2.419 -43.694 5.875 1.00 38.35 O
ATOM 27 OP2 C B 12 -0.441 -43.526 7.525 1.00 40.19 O
ATOM 28 O5' C B 12 -0.066 -43.649 5.043 1.00 38.03 O
TER

Atoms:
C2: (9.556,-40.886,3.133)
OP1: (17.267,-41.212,2.055)
OP2: (15.982,-41.273,4.272)
C4: (10.356,-40.952,5.314)
O5': (14.775,-41.184,2.108)
C3': (12.788,-39.593,0.705)
C1': (11.068,-41.114,1.210)
O4': (12.254,-41.853,0.941)
C5': (14.607,-41.401,0.709)
P: (16.097,-41.662,2.850)
O2: (8.638,-40.767,2.310)
C4': (13.222,-40.989,0.290)
C2': (11.274,-39.719,0.626)
O2': (10.844,-39.773,-0.713)
N1: (10.854,-41.065,2.663)
N3: (9.332,-40.840,4.459)
N4: (10.092,-40.890,6.631)
C6: (11.895,-41.182,3.540)
C5: (11.696,-41.131,4.861)
O3': (13.288,-38.580,-0.170)
OP1: (-1.827,-40.467,11.000)
OP2: (0.667,-40.803,11.469)
C3': (0.017,-40.793,6.486)
C1': (1.665,-39.208,5.925)
C5': (-0.987,-39.336,8.359)
O6: (7.268,-40.721,7.535)
O4': (0.782,-38.616,6.860)
C8: (3.089,-39.720,7.971)
C2: (5.637,-40.072,4.432)
C6: (6.335,-40.430,6.758)
C5: (4.977,-40.112,7.065)
C4: (4.116,-39.808,6.027)
P: (-0.430,-40.013,10.845)
C4': (-0.426,-39.420,6.957)
C2': (0.950,-40.430,5.346)
O2': (0.202,-40.056,4.206)
N1: (6.570,-40.384,5.388)
N2: (6.064,-40.095,3.159)
N3: (4.374,-39.764,4.702)
N7: (4.317,-40.052,8.284)
N9: (2.902,-39.560,6.620)
O5': (-0.068,-39.907,9.297)
O3': (-1.083,-41.581,6.037)
Image (generated by PyMOL):
PyMOL image
show in jmol