Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2171:A2113
Extra
PDB:
ATOM 1 O3' C A2170 -112.306 1.693 71.878 1.00125.38 O
ATOM 2 P C A2171 -111.345 1.455 70.602 1.00125.47 P
ATOM 3 OP1 C A2171 -111.571 0.062 70.132 1.00125.47 O
ATOM 4 OP2 C A2171 -109.971 1.864 70.998 1.00125.47 O
ATOM 5 O5' C A2171 -111.935 2.493 69.539 1.00125.47 O
ATOM 6 C5' C A2171 -111.258 2.777 68.323 1.00125.47 C
ATOM 7 C4' C A2171 -112.102 2.411 67.127 1.00125.47 C
ATOM 8 O4' C A2171 -113.330 3.194 67.123 1.00125.47 O
ATOM 9 C3' C A2171 -111.510 2.710 65.765 1.00125.47 C
ATOM 10 O3' C A2171 -110.492 1.816 65.362 1.00125.47 O
ATOM 11 C2' C A2171 -112.750 2.688 64.883 1.00125.47 C
ATOM 12 O2' C A2171 -113.226 1.357 64.697 1.00125.47 O
ATOM 13 C1' C A2171 -113.730 3.434 65.783 1.00125.47 C
ATOM 14 N1 C A2171 -113.700 4.895 65.532 1.00125.35 N
ATOM 15 C2 C A2171 -114.901 5.554 65.259 1.00125.35 C
ATOM 16 O2 C A2171 -115.951 4.900 65.244 1.00125.35 O
ATOM 17 N3 C A2171 -114.903 6.889 65.017 1.00125.35 N
ATOM 18 C4 C A2171 -113.761 7.576 65.021 1.00125.35 C
ATOM 19 N4 C A2171 -113.818 8.895 64.776 1.00125.35 N
ATOM 20 C5 C A2171 -112.517 6.931 65.289 1.00125.35 C
ATOM 21 C6 C A2171 -112.531 5.611 65.532 1.00125.35 C
ATOM 22 P C A2172 -109.690 2.103 64.000 1.00 96.43 P
ATOM 23 OP1 C A2172 -108.468 1.249 64.012 1.00 96.43 O
ATOM 24 OP2 C A2172 -109.532 3.583 63.887 1.00 96.43 O
ATOM 25 O5' C A2172 -110.713 1.584 62.897 1.00 96.43 O
TER
ATOM 1 O3' A B2112 -120.134 14.664 57.008 1.00132.54 O
ATOM 2 P G B2113 -118.887 13.677 57.345 1.00128.14 P
ATOM 3 OP1 G B2113 -118.735 13.641 58.827 1.00128.14 O
ATOM 4 OP2 G B2113 -117.732 14.129 56.526 1.00128.14 O
ATOM 5 O5' G B2113 -119.402 12.260 56.826 1.00128.14 O
ATOM 6 C5' G B2113 -118.556 11.412 56.066 1.00128.14 C
ATOM 7 C4' G B2113 -118.772 9.959 56.403 1.00128.14 C
ATOM 8 O4' G B2113 -117.550 9.399 56.968 1.00128.14 O
ATOM 9 C3' G B2113 -119.810 9.673 57.472 1.00128.14 C
ATOM 10 O3' G B2113 -121.141 9.724 57.016 1.00128.14 O
ATOM 11 C2' G B2113 -119.371 8.312 57.977 1.00128.14 C
ATOM 12 O2' G B2113 -119.617 7.302 57.007 1.00128.14 O
ATOM 13 C1' G B2113 -117.876 8.551 58.056 1.00128.14 C
ATOM 14 N9 G B2113 -117.520 9.253 59.304 1.00127.43 N
ATOM 15 C8 G B2113 -117.754 10.590 59.570 1.00127.43 C
ATOM 16 N7 G B2113 -117.353 10.968 60.751 1.00127.43 N
ATOM 17 C5 G B2113 -116.825 9.806 61.308 1.00127.43 C
ATOM 18 C6 G B2113 -116.234 9.594 62.582 1.00127.43 C
ATOM 19 O6 G B2113 -116.050 10.405 63.503 1.00127.43 O
ATOM 20 N1 G B2113 -115.838 8.267 62.730 1.00127.43 N
ATOM 21 C2 G B2113 -115.981 7.270 61.793 1.00127.43 C
ATOM 22 N2 G B2113 -115.526 6.057 62.161 1.00127.43 N
ATOM 23 N3 G B2113 -116.528 7.452 60.600 1.00127.43 N
ATOM 24 C4 G B2113 -116.924 8.735 60.429 1.00127.43 C
ATOM 25 P G B2114 -122.319 9.899 58.087 1.00118.76 P
ATOM 26 OP1 G B2114 -123.555 10.234 57.332 1.00118.76 O
ATOM 27 OP2 G B2114 -121.828 10.855 59.120 1.00118.76 O
ATOM 28 O5' G B2114 -122.431 8.433 58.710 1.00118.76 O
TER
ATOM 2 P C A2171 -111.345 1.455 70.602 1.00125.47 P
ATOM 3 OP1 C A2171 -111.571 0.062 70.132 1.00125.47 O
ATOM 4 OP2 C A2171 -109.971 1.864 70.998 1.00125.47 O
ATOM 5 O5' C A2171 -111.935 2.493 69.539 1.00125.47 O
ATOM 6 C5' C A2171 -111.258 2.777 68.323 1.00125.47 C
ATOM 7 C4' C A2171 -112.102 2.411 67.127 1.00125.47 C
ATOM 8 O4' C A2171 -113.330 3.194 67.123 1.00125.47 O
ATOM 9 C3' C A2171 -111.510 2.710 65.765 1.00125.47 C
ATOM 10 O3' C A2171 -110.492 1.816 65.362 1.00125.47 O
ATOM 11 C2' C A2171 -112.750 2.688 64.883 1.00125.47 C
ATOM 12 O2' C A2171 -113.226 1.357 64.697 1.00125.47 O
ATOM 13 C1' C A2171 -113.730 3.434 65.783 1.00125.47 C
ATOM 14 N1 C A2171 -113.700 4.895 65.532 1.00125.35 N
ATOM 15 C2 C A2171 -114.901 5.554 65.259 1.00125.35 C
ATOM 16 O2 C A2171 -115.951 4.900 65.244 1.00125.35 O
ATOM 17 N3 C A2171 -114.903 6.889 65.017 1.00125.35 N
ATOM 18 C4 C A2171 -113.761 7.576 65.021 1.00125.35 C
ATOM 19 N4 C A2171 -113.818 8.895 64.776 1.00125.35 N
ATOM 20 C5 C A2171 -112.517 6.931 65.289 1.00125.35 C
ATOM 21 C6 C A2171 -112.531 5.611 65.532 1.00125.35 C
ATOM 22 P C A2172 -109.690 2.103 64.000 1.00 96.43 P
ATOM 23 OP1 C A2172 -108.468 1.249 64.012 1.00 96.43 O
ATOM 24 OP2 C A2172 -109.532 3.583 63.887 1.00 96.43 O
ATOM 25 O5' C A2172 -110.713 1.584 62.897 1.00 96.43 O
TER
ATOM 1 O3' A B2112 -120.134 14.664 57.008 1.00132.54 O
ATOM 2 P G B2113 -118.887 13.677 57.345 1.00128.14 P
ATOM 3 OP1 G B2113 -118.735 13.641 58.827 1.00128.14 O
ATOM 4 OP2 G B2113 -117.732 14.129 56.526 1.00128.14 O
ATOM 5 O5' G B2113 -119.402 12.260 56.826 1.00128.14 O
ATOM 6 C5' G B2113 -118.556 11.412 56.066 1.00128.14 C
ATOM 7 C4' G B2113 -118.772 9.959 56.403 1.00128.14 C
ATOM 8 O4' G B2113 -117.550 9.399 56.968 1.00128.14 O
ATOM 9 C3' G B2113 -119.810 9.673 57.472 1.00128.14 C
ATOM 10 O3' G B2113 -121.141 9.724 57.016 1.00128.14 O
ATOM 11 C2' G B2113 -119.371 8.312 57.977 1.00128.14 C
ATOM 12 O2' G B2113 -119.617 7.302 57.007 1.00128.14 O
ATOM 13 C1' G B2113 -117.876 8.551 58.056 1.00128.14 C
ATOM 14 N9 G B2113 -117.520 9.253 59.304 1.00127.43 N
ATOM 15 C8 G B2113 -117.754 10.590 59.570 1.00127.43 C
ATOM 16 N7 G B2113 -117.353 10.968 60.751 1.00127.43 N
ATOM 17 C5 G B2113 -116.825 9.806 61.308 1.00127.43 C
ATOM 18 C6 G B2113 -116.234 9.594 62.582 1.00127.43 C
ATOM 19 O6 G B2113 -116.050 10.405 63.503 1.00127.43 O
ATOM 20 N1 G B2113 -115.838 8.267 62.730 1.00127.43 N
ATOM 21 C2 G B2113 -115.981 7.270 61.793 1.00127.43 C
ATOM 22 N2 G B2113 -115.526 6.057 62.161 1.00127.43 N
ATOM 23 N3 G B2113 -116.528 7.452 60.600 1.00127.43 N
ATOM 24 C4 G B2113 -116.924 8.735 60.429 1.00127.43 C
ATOM 25 P G B2114 -122.319 9.899 58.087 1.00118.76 P
ATOM 26 OP1 G B2114 -123.555 10.234 57.332 1.00118.76 O
ATOM 27 OP2 G B2114 -121.828 10.855 59.120 1.00118.76 O
ATOM 28 O5' G B2114 -122.431 8.433 58.710 1.00118.76 O
TER
Atoms:
C2: (-114.901,5.554,65.259)
OP1: (-111.571,0.062,70.132)
OP2: (-109.971,1.864,70.998)
C4: (-113.761,7.576,65.021)
O5': (-111.935,2.493,69.539)
C3': (-111.510,2.710,65.765)
C1': (-113.730,3.434,65.783)
O4': (-113.330,3.194,67.123)
C5': (-111.258,2.777,68.323)
P: (-111.345,1.455,70.602)
O2: (-115.951,4.900,65.244)
C4': (-112.102,2.411,67.127)
C2': (-112.750,2.688,64.883)
O2': (-113.226,1.357,64.697)
N1: (-113.700,4.895,65.532)
N3: (-114.903,6.889,65.017)
N4: (-113.818,8.895,64.776)
C6: (-112.531,5.611,65.532)
C5: (-112.517,6.931,65.289)
O3': (-110.492,1.816,65.362)
OP1: (-111.571,0.062,70.132)
OP2: (-109.971,1.864,70.998)
C4: (-113.761,7.576,65.021)
O5': (-111.935,2.493,69.539)
C3': (-111.510,2.710,65.765)
C1': (-113.730,3.434,65.783)
O4': (-113.330,3.194,67.123)
C5': (-111.258,2.777,68.323)
P: (-111.345,1.455,70.602)
O2: (-115.951,4.900,65.244)
C4': (-112.102,2.411,67.127)
C2': (-112.750,2.688,64.883)
O2': (-113.226,1.357,64.697)
N1: (-113.700,4.895,65.532)
N3: (-114.903,6.889,65.017)
N4: (-113.818,8.895,64.776)
C6: (-112.531,5.611,65.532)
C5: (-112.517,6.931,65.289)
O3': (-110.492,1.816,65.362)
OP1: (-118.735,13.641,58.827)
OP2: (-117.732,14.129,56.526)
C3': (-119.810,9.673,57.472)
C1': (-117.876,8.551,58.056)
C5': (-118.556,11.412,56.066)
O6: (-116.050,10.405,63.503)
O4': (-117.550,9.399,56.968)
C8: (-117.754,10.590,59.570)
C2: (-115.981,7.270,61.793)
C6: (-116.234,9.594,62.582)
C5: (-116.825,9.806,61.308)
C4: (-116.924,8.735,60.429)
P: (-118.887,13.677,57.345)
C4': (-118.772,9.959,56.403)
C2': (-119.371,8.312,57.977)
O2': (-119.617,7.302,57.007)
N1: (-115.838,8.267,62.730)
N2: (-115.526,6.057,62.161)
N3: (-116.528,7.452,60.600)
N7: (-117.353,10.968,60.751)
N9: (-117.520,9.253,59.304)
O5': (-119.402,12.260,56.826)
O3': (-121.141,9.724,57.016)
OP2: (-117.732,14.129,56.526)
C3': (-119.810,9.673,57.472)
C1': (-117.876,8.551,58.056)
C5': (-118.556,11.412,56.066)
O6: (-116.050,10.405,63.503)
O4': (-117.550,9.399,56.968)
C8: (-117.754,10.590,59.570)
C2: (-115.981,7.270,61.793)
C6: (-116.234,9.594,62.582)
C5: (-116.825,9.806,61.308)
C4: (-116.924,8.735,60.429)
P: (-118.887,13.677,57.345)
C4': (-118.772,9.959,56.403)
C2': (-119.371,8.312,57.977)
O2': (-119.617,7.302,57.007)
N1: (-115.838,8.267,62.730)
N2: (-115.526,6.057,62.161)
N3: (-116.528,7.452,60.600)
N7: (-117.353,10.968,60.751)
N9: (-117.520,9.253,59.304)
O5': (-119.402,12.260,56.826)
O3': (-121.141,9.724,57.016)
Image (generated by PyMOL):