Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01784:01925
Extra
PDB:
ATOM 1 O3' U A1783 106.400 132.309 108.868 1.00 43.68 O
ATOM 2 P C A1784 106.784 132.189 107.309 1.00 43.79 P
ATOM 3 OP1 C A1784 107.548 130.922 107.136 1.00 43.10 O
ATOM 4 OP2 C A1784 107.378 133.473 106.857 1.00 43.13 O
ATOM 5 O5' C A1784 105.380 132.021 106.569 1.00 43.98 O
ATOM 6 C5' C A1784 104.567 130.854 106.789 1.00 40.82 C
ATOM 7 C4' C A1784 103.400 130.841 105.842 1.00 39.47 C
ATOM 8 O4' C A1784 102.497 131.936 106.144 1.00 41.11 O
ATOM 9 C3' C A1784 103.734 131.063 104.381 1.00 39.70 C
ATOM 10 O3' C A1784 104.241 129.900 103.757 1.00 39.50 O
ATOM 11 C2' C A1784 102.382 131.473 103.818 1.00 40.69 C
ATOM 12 O2' C A1784 101.507 130.383 103.641 1.00 41.95 O
ATOM 13 C1' C A1784 101.856 132.359 104.946 1.00 40.96 C
ATOM 14 N1 C A1784 102.181 133.770 104.684 1.00 41.28 N
ATOM 15 C2 C A1784 101.347 134.493 103.835 1.00 42.72 C
ATOM 16 O2 C A1784 100.341 133.942 103.371 1.00 46.43 O
ATOM 17 N3 C A1784 101.652 135.772 103.538 1.00 43.78 N
ATOM 18 C4 C A1784 102.739 136.334 104.060 1.00 42.23 C
ATOM 19 N4 C A1784 103.014 137.592 103.715 1.00 41.16 N
ATOM 20 C5 C A1784 103.595 135.631 104.951 1.00 41.77 C
ATOM 21 C6 C A1784 103.282 134.363 105.235 1.00 41.10 C
ATOM 22 P G A1785 105.233 130.045 102.505 1.00 40.57 P
ATOM 23 OP1 G A1785 105.580 128.677 102.050 1.00 42.80 O
ATOM 24 OP2 G A1785 106.315 130.997 102.847 1.00 43.87 O
ATOM 25 O5' G A1785 104.340 130.735 101.388 1.00 41.36 O
TER
ATOM 1 O3' A B1924 102.011 125.158 106.297 1.00 43.25 O
ATOM 2 P G B1925 101.281 126.575 106.114 1.00 42.43 P
ATOM 3 OP1 G B1925 102.218 127.495 105.424 1.00 42.26 O
ATOM 4 OP2 G B1925 100.722 126.949 107.443 1.00 41.46 O
ATOM 5 O5' G B1925 100.075 126.278 105.119 1.00 42.83 O
ATOM 6 C5' G B1925 98.710 126.499 105.521 1.00 41.84 C
ATOM 7 C4' G B1925 97.758 125.940 104.490 1.00 41.10 C
ATOM 8 O4' G B1925 97.592 126.893 103.401 1.00 39.49 O
ATOM 9 C3' G B1925 98.195 124.619 103.859 1.00 41.48 C
ATOM 10 O3' G B1925 97.194 123.623 103.929 1.00 43.79 O
ATOM 11 C2' G B1925 98.508 125.002 102.416 1.00 40.24 C
ATOM 12 O2' G B1925 98.276 123.975 101.470 1.00 38.97 O
ATOM 13 C1' G B1925 97.579 126.192 102.185 1.00 39.57 C
ATOM 14 N9 G B1925 98.121 127.039 101.126 1.00 40.83 N
ATOM 15 C8 G B1925 99.444 127.339 100.910 1.00 42.67 C
ATOM 16 N7 G B1925 99.652 127.957 99.781 1.00 43.26 N
ATOM 17 C5 G B1925 98.388 128.109 99.235 1.00 41.95 C
ATOM 18 C6 G B1925 97.995 128.663 98.008 1.00 43.54 C
ATOM 19 O6 G B1925 98.708 129.103 97.101 1.00 46.27 O
ATOM 20 N1 G B1925 96.615 128.664 97.866 1.00 44.18 N
ATOM 21 C2 G B1925 95.728 128.174 98.785 1.00 42.55 C
ATOM 22 N2 G B1925 94.434 128.310 98.485 1.00 43.12 N
ATOM 23 N3 G B1925 96.085 127.603 99.918 1.00 42.41 N
ATOM 24 C4 G B1925 97.425 127.606 100.080 1.00 42.16 C
ATOM 25 P U B1926 97.548 122.206 104.601 1.00 44.68 P
ATOM 26 OP1 U B1926 96.293 121.412 104.624 1.00 45.60 O
ATOM 27 OP2 U B1926 98.282 122.460 105.872 1.00 45.52 O
ATOM 28 O5' U B1926 98.567 121.510 103.595 1.00 42.98 O
TER
ATOM 2 P C A1784 106.784 132.189 107.309 1.00 43.79 P
ATOM 3 OP1 C A1784 107.548 130.922 107.136 1.00 43.10 O
ATOM 4 OP2 C A1784 107.378 133.473 106.857 1.00 43.13 O
ATOM 5 O5' C A1784 105.380 132.021 106.569 1.00 43.98 O
ATOM 6 C5' C A1784 104.567 130.854 106.789 1.00 40.82 C
ATOM 7 C4' C A1784 103.400 130.841 105.842 1.00 39.47 C
ATOM 8 O4' C A1784 102.497 131.936 106.144 1.00 41.11 O
ATOM 9 C3' C A1784 103.734 131.063 104.381 1.00 39.70 C
ATOM 10 O3' C A1784 104.241 129.900 103.757 1.00 39.50 O
ATOM 11 C2' C A1784 102.382 131.473 103.818 1.00 40.69 C
ATOM 12 O2' C A1784 101.507 130.383 103.641 1.00 41.95 O
ATOM 13 C1' C A1784 101.856 132.359 104.946 1.00 40.96 C
ATOM 14 N1 C A1784 102.181 133.770 104.684 1.00 41.28 N
ATOM 15 C2 C A1784 101.347 134.493 103.835 1.00 42.72 C
ATOM 16 O2 C A1784 100.341 133.942 103.371 1.00 46.43 O
ATOM 17 N3 C A1784 101.652 135.772 103.538 1.00 43.78 N
ATOM 18 C4 C A1784 102.739 136.334 104.060 1.00 42.23 C
ATOM 19 N4 C A1784 103.014 137.592 103.715 1.00 41.16 N
ATOM 20 C5 C A1784 103.595 135.631 104.951 1.00 41.77 C
ATOM 21 C6 C A1784 103.282 134.363 105.235 1.00 41.10 C
ATOM 22 P G A1785 105.233 130.045 102.505 1.00 40.57 P
ATOM 23 OP1 G A1785 105.580 128.677 102.050 1.00 42.80 O
ATOM 24 OP2 G A1785 106.315 130.997 102.847 1.00 43.87 O
ATOM 25 O5' G A1785 104.340 130.735 101.388 1.00 41.36 O
TER
ATOM 1 O3' A B1924 102.011 125.158 106.297 1.00 43.25 O
ATOM 2 P G B1925 101.281 126.575 106.114 1.00 42.43 P
ATOM 3 OP1 G B1925 102.218 127.495 105.424 1.00 42.26 O
ATOM 4 OP2 G B1925 100.722 126.949 107.443 1.00 41.46 O
ATOM 5 O5' G B1925 100.075 126.278 105.119 1.00 42.83 O
ATOM 6 C5' G B1925 98.710 126.499 105.521 1.00 41.84 C
ATOM 7 C4' G B1925 97.758 125.940 104.490 1.00 41.10 C
ATOM 8 O4' G B1925 97.592 126.893 103.401 1.00 39.49 O
ATOM 9 C3' G B1925 98.195 124.619 103.859 1.00 41.48 C
ATOM 10 O3' G B1925 97.194 123.623 103.929 1.00 43.79 O
ATOM 11 C2' G B1925 98.508 125.002 102.416 1.00 40.24 C
ATOM 12 O2' G B1925 98.276 123.975 101.470 1.00 38.97 O
ATOM 13 C1' G B1925 97.579 126.192 102.185 1.00 39.57 C
ATOM 14 N9 G B1925 98.121 127.039 101.126 1.00 40.83 N
ATOM 15 C8 G B1925 99.444 127.339 100.910 1.00 42.67 C
ATOM 16 N7 G B1925 99.652 127.957 99.781 1.00 43.26 N
ATOM 17 C5 G B1925 98.388 128.109 99.235 1.00 41.95 C
ATOM 18 C6 G B1925 97.995 128.663 98.008 1.00 43.54 C
ATOM 19 O6 G B1925 98.708 129.103 97.101 1.00 46.27 O
ATOM 20 N1 G B1925 96.615 128.664 97.866 1.00 44.18 N
ATOM 21 C2 G B1925 95.728 128.174 98.785 1.00 42.55 C
ATOM 22 N2 G B1925 94.434 128.310 98.485 1.00 43.12 N
ATOM 23 N3 G B1925 96.085 127.603 99.918 1.00 42.41 N
ATOM 24 C4 G B1925 97.425 127.606 100.080 1.00 42.16 C
ATOM 25 P U B1926 97.548 122.206 104.601 1.00 44.68 P
ATOM 26 OP1 U B1926 96.293 121.412 104.624 1.00 45.60 O
ATOM 27 OP2 U B1926 98.282 122.460 105.872 1.00 45.52 O
ATOM 28 O5' U B1926 98.567 121.510 103.595 1.00 42.98 O
TER
Atoms:
C2: (101.347,134.493,103.835)
OP1: (107.548,130.922,107.136)
OP2: (107.378,133.473,106.857)
C4: (102.739,136.334,104.060)
O5': (105.380,132.021,106.569)
C3': (103.734,131.063,104.381)
C1': (101.856,132.359,104.946)
O4': (102.497,131.936,106.144)
C5': (104.567,130.854,106.789)
P: (106.784,132.189,107.309)
O2: (100.341,133.942,103.371)
C4': (103.400,130.841,105.842)
C2': (102.382,131.473,103.818)
O2': (101.507,130.383,103.641)
N1: (102.181,133.770,104.684)
N3: (101.652,135.772,103.538)
N4: (103.014,137.592,103.715)
C6: (103.282,134.363,105.235)
C5: (103.595,135.631,104.951)
O3': (104.241,129.900,103.757)
OP1: (107.548,130.922,107.136)
OP2: (107.378,133.473,106.857)
C4: (102.739,136.334,104.060)
O5': (105.380,132.021,106.569)
C3': (103.734,131.063,104.381)
C1': (101.856,132.359,104.946)
O4': (102.497,131.936,106.144)
C5': (104.567,130.854,106.789)
P: (106.784,132.189,107.309)
O2: (100.341,133.942,103.371)
C4': (103.400,130.841,105.842)
C2': (102.382,131.473,103.818)
O2': (101.507,130.383,103.641)
N1: (102.181,133.770,104.684)
N3: (101.652,135.772,103.538)
N4: (103.014,137.592,103.715)
C6: (103.282,134.363,105.235)
C5: (103.595,135.631,104.951)
O3': (104.241,129.900,103.757)
OP1: (102.218,127.495,105.424)
OP2: (100.722,126.949,107.443)
C3': (98.195,124.619,103.859)
C1': (97.579,126.192,102.185)
C5': (98.710,126.499,105.521)
O6: (98.708,129.103,97.101)
O4': (97.592,126.893,103.401)
C8: (99.444,127.339,100.910)
C2: (95.728,128.174,98.785)
C6: (97.995,128.663,98.008)
C5: (98.388,128.109,99.235)
C4: (97.425,127.606,100.080)
P: (101.281,126.575,106.114)
C4': (97.758,125.940,104.490)
C2': (98.508,125.002,102.416)
O2': (98.276,123.975,101.470)
N1: (96.615,128.664,97.866)
N2: (94.434,128.310,98.485)
N3: (96.085,127.603,99.918)
N7: (99.652,127.957,99.781)
N9: (98.121,127.039,101.126)
O5': (100.075,126.278,105.119)
O3': (97.194,123.623,103.929)
OP2: (100.722,126.949,107.443)
C3': (98.195,124.619,103.859)
C1': (97.579,126.192,102.185)
C5': (98.710,126.499,105.521)
O6: (98.708,129.103,97.101)
O4': (97.592,126.893,103.401)
C8: (99.444,127.339,100.910)
C2: (95.728,128.174,98.785)
C6: (97.995,128.663,98.008)
C5: (98.388,128.109,99.235)
C4: (97.425,127.606,100.080)
P: (101.281,126.575,106.114)
C4': (97.758,125.940,104.490)
C2': (98.508,125.002,102.416)
O2': (98.276,123.975,101.470)
N1: (96.615,128.664,97.866)
N2: (94.434,128.310,98.485)
N3: (96.085,127.603,99.918)
N7: (99.652,127.957,99.781)
N9: (98.121,127.039,101.126)
O5': (100.075,126.278,105.119)
O3': (97.194,123.623,103.929)
Image (generated by PyMOL):