Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0479:0489
Extra
PDB:
ATOM 1 O3' C A 478 20.048 178.562 60.956 1.00 56.25 O
ATOM 2 P C A 479 20.973 178.995 62.193 1.00 57.04 P
ATOM 3 OP1 C A 479 21.156 180.470 62.132 1.00 58.40 O
ATOM 4 OP2 C A 479 22.167 178.110 62.198 1.00 57.07 O
ATOM 5 O5' C A 479 20.067 178.665 63.459 1.00 54.44 O
ATOM 6 C5' C A 479 18.838 179.371 63.688 1.00 51.79 C
ATOM 7 C4' C A 479 18.177 178.870 64.946 1.00 52.19 C
ATOM 8 O4' C A 479 17.738 177.498 64.761 1.00 53.05 O
ATOM 9 C3' C A 479 19.072 178.796 66.167 1.00 52.40 C
ATOM 10 O3' C A 479 19.227 180.049 66.801 1.00 54.87 O
ATOM 11 C2' C A 479 18.337 177.792 67.034 1.00 52.98 C
ATOM 12 O2' C A 479 17.215 178.365 67.673 1.00 53.36 O
ATOM 13 C1' C A 479 17.881 176.782 65.981 1.00 52.70 C
ATOM 14 N1 C A 479 18.877 175.705 65.780 1.00 53.93 N
ATOM 15 C2 C A 479 18.786 174.542 66.557 1.00 53.56 C
ATOM 16 O2 C A 479 17.861 174.433 67.376 1.00 55.68 O
ATOM 17 N3 C A 479 19.706 173.564 66.391 1.00 52.51 N
ATOM 18 C4 C A 479 20.679 173.707 65.490 1.00 52.02 C
ATOM 19 N4 C A 479 21.556 172.712 65.355 1.00 51.88 N
ATOM 20 C5 C A 479 20.795 174.874 64.684 1.00 52.28 C
ATOM 21 C6 C A 479 19.884 175.838 64.859 1.00 53.95 C
ATOM 22 P C A 480 20.547 180.338 67.666 1.00 57.13 P
ATOM 23 OP1 C A 480 20.496 181.766 68.078 1.00 57.54 O
ATOM 24 OP2 C A 480 21.734 179.833 66.915 1.00 55.45 O
ATOM 25 O5' C A 480 20.335 179.442 68.965 1.00 55.60 O
TER
ATOM 1 O3' G B 488 23.141 164.616 73.774 1.00 42.89 O
ATOM 2 P G B 489 21.874 164.289 72.845 1.00 46.57 P
ATOM 3 OP1 G B 489 21.180 163.094 73.403 1.00 44.56 O
ATOM 4 OP2 G B 489 22.343 164.272 71.430 1.00 43.88 O
ATOM 5 O5' G B 489 20.927 165.553 73.050 1.00 44.89 O
ATOM 6 C5' G B 489 20.397 165.876 74.350 1.00 45.88 C
ATOM 7 C4' G B 489 19.604 167.163 74.290 1.00 46.47 C
ATOM 8 O4' G B 489 20.484 168.261 73.934 1.00 47.51 O
ATOM 9 C3' G B 489 18.511 167.220 73.238 1.00 45.84 C
ATOM 10 O3' G B 489 17.322 166.575 73.669 1.00 45.33 O
ATOM 11 C2' G B 489 18.331 168.717 73.053 1.00 45.86 C
ATOM 12 O2' G B 489 17.585 169.303 74.100 1.00 46.87 O
ATOM 13 C1' G B 489 19.778 169.200 73.141 1.00 46.64 C
ATOM 14 N9 G B 489 20.428 169.280 71.836 1.00 48.79 N
ATOM 15 C8 G B 489 21.346 168.407 71.306 1.00 50.16 C
ATOM 16 N7 G B 489 21.748 168.748 70.111 1.00 51.79 N
ATOM 17 C5 G B 489 21.054 169.919 69.837 1.00 51.18 C
ATOM 18 C6 G B 489 21.081 170.762 68.690 1.00 51.28 C
ATOM 19 O6 G B 489 21.761 170.647 67.659 1.00 49.27 O
ATOM 20 N1 G B 489 20.211 171.839 68.831 1.00 52.33 N
ATOM 21 C2 G B 489 19.430 172.085 69.935 1.00 52.64 C
ATOM 22 N2 G B 489 18.665 173.181 69.893 1.00 54.44 N
ATOM 23 N3 G B 489 19.402 171.315 71.005 1.00 52.75 N
ATOM 24 C4 G B 489 20.232 170.257 70.890 1.00 50.81 C
ATOM 25 P A B 490 16.459 165.718 72.619 1.00 46.99 P
ATOM 26 OP1 A B 490 15.344 165.095 73.381 1.00 43.90 O
ATOM 27 OP2 A B 490 17.381 164.858 71.829 1.00 44.58 O
ATOM 28 O5' A B 490 15.864 166.815 71.625 1.00 48.34 O
TER
ATOM 2 P C A 479 20.973 178.995 62.193 1.00 57.04 P
ATOM 3 OP1 C A 479 21.156 180.470 62.132 1.00 58.40 O
ATOM 4 OP2 C A 479 22.167 178.110 62.198 1.00 57.07 O
ATOM 5 O5' C A 479 20.067 178.665 63.459 1.00 54.44 O
ATOM 6 C5' C A 479 18.838 179.371 63.688 1.00 51.79 C
ATOM 7 C4' C A 479 18.177 178.870 64.946 1.00 52.19 C
ATOM 8 O4' C A 479 17.738 177.498 64.761 1.00 53.05 O
ATOM 9 C3' C A 479 19.072 178.796 66.167 1.00 52.40 C
ATOM 10 O3' C A 479 19.227 180.049 66.801 1.00 54.87 O
ATOM 11 C2' C A 479 18.337 177.792 67.034 1.00 52.98 C
ATOM 12 O2' C A 479 17.215 178.365 67.673 1.00 53.36 O
ATOM 13 C1' C A 479 17.881 176.782 65.981 1.00 52.70 C
ATOM 14 N1 C A 479 18.877 175.705 65.780 1.00 53.93 N
ATOM 15 C2 C A 479 18.786 174.542 66.557 1.00 53.56 C
ATOM 16 O2 C A 479 17.861 174.433 67.376 1.00 55.68 O
ATOM 17 N3 C A 479 19.706 173.564 66.391 1.00 52.51 N
ATOM 18 C4 C A 479 20.679 173.707 65.490 1.00 52.02 C
ATOM 19 N4 C A 479 21.556 172.712 65.355 1.00 51.88 N
ATOM 20 C5 C A 479 20.795 174.874 64.684 1.00 52.28 C
ATOM 21 C6 C A 479 19.884 175.838 64.859 1.00 53.95 C
ATOM 22 P C A 480 20.547 180.338 67.666 1.00 57.13 P
ATOM 23 OP1 C A 480 20.496 181.766 68.078 1.00 57.54 O
ATOM 24 OP2 C A 480 21.734 179.833 66.915 1.00 55.45 O
ATOM 25 O5' C A 480 20.335 179.442 68.965 1.00 55.60 O
TER
ATOM 1 O3' G B 488 23.141 164.616 73.774 1.00 42.89 O
ATOM 2 P G B 489 21.874 164.289 72.845 1.00 46.57 P
ATOM 3 OP1 G B 489 21.180 163.094 73.403 1.00 44.56 O
ATOM 4 OP2 G B 489 22.343 164.272 71.430 1.00 43.88 O
ATOM 5 O5' G B 489 20.927 165.553 73.050 1.00 44.89 O
ATOM 6 C5' G B 489 20.397 165.876 74.350 1.00 45.88 C
ATOM 7 C4' G B 489 19.604 167.163 74.290 1.00 46.47 C
ATOM 8 O4' G B 489 20.484 168.261 73.934 1.00 47.51 O
ATOM 9 C3' G B 489 18.511 167.220 73.238 1.00 45.84 C
ATOM 10 O3' G B 489 17.322 166.575 73.669 1.00 45.33 O
ATOM 11 C2' G B 489 18.331 168.717 73.053 1.00 45.86 C
ATOM 12 O2' G B 489 17.585 169.303 74.100 1.00 46.87 O
ATOM 13 C1' G B 489 19.778 169.200 73.141 1.00 46.64 C
ATOM 14 N9 G B 489 20.428 169.280 71.836 1.00 48.79 N
ATOM 15 C8 G B 489 21.346 168.407 71.306 1.00 50.16 C
ATOM 16 N7 G B 489 21.748 168.748 70.111 1.00 51.79 N
ATOM 17 C5 G B 489 21.054 169.919 69.837 1.00 51.18 C
ATOM 18 C6 G B 489 21.081 170.762 68.690 1.00 51.28 C
ATOM 19 O6 G B 489 21.761 170.647 67.659 1.00 49.27 O
ATOM 20 N1 G B 489 20.211 171.839 68.831 1.00 52.33 N
ATOM 21 C2 G B 489 19.430 172.085 69.935 1.00 52.64 C
ATOM 22 N2 G B 489 18.665 173.181 69.893 1.00 54.44 N
ATOM 23 N3 G B 489 19.402 171.315 71.005 1.00 52.75 N
ATOM 24 C4 G B 489 20.232 170.257 70.890 1.00 50.81 C
ATOM 25 P A B 490 16.459 165.718 72.619 1.00 46.99 P
ATOM 26 OP1 A B 490 15.344 165.095 73.381 1.00 43.90 O
ATOM 27 OP2 A B 490 17.381 164.858 71.829 1.00 44.58 O
ATOM 28 O5' A B 490 15.864 166.815 71.625 1.00 48.34 O
TER
Atoms:
C2: (18.786,174.542,66.557)
OP1: (21.156,180.470,62.132)
OP2: (22.167,178.110,62.198)
C4: (20.679,173.707,65.490)
O5': (20.067,178.665,63.459)
C3': (19.072,178.796,66.167)
C1': (17.881,176.782,65.981)
O4': (17.738,177.498,64.761)
C5': (18.838,179.371,63.688)
P: (20.973,178.995,62.193)
O2: (17.861,174.433,67.376)
C4': (18.177,178.870,64.946)
C2': (18.337,177.792,67.034)
O2': (17.215,178.365,67.673)
N1: (18.877,175.705,65.780)
N3: (19.706,173.564,66.391)
N4: (21.556,172.712,65.355)
C6: (19.884,175.838,64.859)
C5: (20.795,174.874,64.684)
O3': (19.227,180.049,66.801)
OP1: (21.156,180.470,62.132)
OP2: (22.167,178.110,62.198)
C4: (20.679,173.707,65.490)
O5': (20.067,178.665,63.459)
C3': (19.072,178.796,66.167)
C1': (17.881,176.782,65.981)
O4': (17.738,177.498,64.761)
C5': (18.838,179.371,63.688)
P: (20.973,178.995,62.193)
O2: (17.861,174.433,67.376)
C4': (18.177,178.870,64.946)
C2': (18.337,177.792,67.034)
O2': (17.215,178.365,67.673)
N1: (18.877,175.705,65.780)
N3: (19.706,173.564,66.391)
N4: (21.556,172.712,65.355)
C6: (19.884,175.838,64.859)
C5: (20.795,174.874,64.684)
O3': (19.227,180.049,66.801)
OP1: (21.180,163.094,73.403)
OP2: (22.343,164.272,71.430)
C3': (18.511,167.220,73.238)
C1': (19.778,169.200,73.141)
C5': (20.397,165.876,74.350)
O6: (21.761,170.647,67.659)
O4': (20.484,168.261,73.934)
C8: (21.346,168.407,71.306)
C2: (19.430,172.085,69.935)
C6: (21.081,170.762,68.690)
C5: (21.054,169.919,69.837)
C4: (20.232,170.257,70.890)
P: (21.874,164.289,72.845)
C4': (19.604,167.163,74.290)
C2': (18.331,168.717,73.053)
O2': (17.585,169.303,74.100)
N1: (20.211,171.839,68.831)
N2: (18.665,173.181,69.893)
N3: (19.402,171.315,71.005)
N7: (21.748,168.748,70.111)
N9: (20.428,169.280,71.836)
O5': (20.927,165.553,73.050)
O3': (17.322,166.575,73.669)
OP2: (22.343,164.272,71.430)
C3': (18.511,167.220,73.238)
C1': (19.778,169.200,73.141)
C5': (20.397,165.876,74.350)
O6: (21.761,170.647,67.659)
O4': (20.484,168.261,73.934)
C8: (21.346,168.407,71.306)
C2: (19.430,172.085,69.935)
C6: (21.081,170.762,68.690)
C5: (21.054,169.919,69.837)
C4: (20.232,170.257,70.890)
P: (21.874,164.289,72.845)
C4': (19.604,167.163,74.290)
C2': (18.331,168.717,73.053)
O2': (17.585,169.303,74.100)
N1: (20.211,171.839,68.831)
N2: (18.665,173.181,69.893)
N3: (19.402,171.315,71.005)
N7: (21.748,168.748,70.111)
N9: (20.428,169.280,71.836)
O5': (20.927,165.553,73.050)
O3': (17.322,166.575,73.669)
Image (generated by PyMOL):