Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01784:01925
Extra
PDB:
ATOM 1 O3' U A1783 106.540 132.698 109.480 1.00 53.43 O
ATOM 2 P C A1784 106.912 132.542 107.924 1.00 53.00 P
ATOM 3 OP1 C A1784 107.710 131.295 107.766 1.00 50.41 O
ATOM 4 OP2 C A1784 107.464 133.839 107.453 1.00 52.57 O
ATOM 5 O5' C A1784 105.507 132.353 107.198 1.00 53.09 O
ATOM 6 C5' C A1784 104.746 131.143 107.346 1.00 51.74 C
ATOM 7 C4' C A1784 103.602 131.126 106.363 1.00 49.82 C
ATOM 8 O4' C A1784 102.644 132.170 106.688 1.00 49.46 O
ATOM 9 C3' C A1784 103.979 131.433 104.928 1.00 48.85 C
ATOM 10 O3' C A1784 104.521 130.309 104.260 1.00 48.50 O
ATOM 11 C2' C A1784 102.641 131.838 104.341 1.00 49.82 C
ATOM 12 O2' C A1784 101.831 130.722 104.073 1.00 53.36 O
ATOM 13 C1' C A1784 102.037 132.641 105.494 1.00 49.39 C
ATOM 14 N1 C A1784 102.334 134.074 105.324 1.00 49.43 N
ATOM 15 C2 C A1784 101.743 134.752 104.258 1.00 50.44 C
ATOM 16 O2 C A1784 100.938 134.150 103.540 1.00 53.60 O
ATOM 17 N3 C A1784 102.061 136.041 104.034 1.00 51.18 N
ATOM 18 C4 C A1784 102.927 136.659 104.832 1.00 50.22 C
ATOM 19 N4 C A1784 103.245 137.918 104.545 1.00 50.58 N
ATOM 20 C5 C A1784 103.513 136.010 105.953 1.00 49.34 C
ATOM 21 C6 C A1784 103.190 134.729 106.162 1.00 49.20 C
ATOM 22 P G A1785 105.438 130.527 102.959 1.00 48.54 P
ATOM 23 OP1 G A1785 105.881 129.197 102.448 1.00 47.51 O
ATOM 24 OP2 G A1785 106.448 131.569 103.272 1.00 50.65 O
ATOM 25 O5' G A1785 104.453 131.186 101.901 1.00 47.91 O
TER
ATOM 1 O3' A B1924 102.196 125.544 106.942 1.00 58.15 O
ATOM 2 P G B1925 101.524 126.993 106.838 1.00 58.19 P
ATOM 3 OP1 G B1925 102.510 127.884 106.171 1.00 60.24 O
ATOM 4 OP2 G B1925 100.988 127.353 108.178 1.00 57.81 O
ATOM 5 O5' G B1925 100.295 126.790 105.853 1.00 60.18 O
ATOM 6 C5' G B1925 98.943 126.801 106.347 1.00 61.19 C
ATOM 7 C4' G B1925 98.009 126.247 105.302 1.00 61.51 C
ATOM 8 O4' G B1925 97.838 127.203 104.234 1.00 60.44 O
ATOM 9 C3' G B1925 98.521 124.995 104.610 1.00 62.27 C
ATOM 10 O3' G B1925 98.356 123.911 105.565 1.00 61.69 O
ATOM 11 C2' G B1925 97.753 125.007 103.282 1.00 62.19 C
ATOM 12 O2' G B1925 96.500 124.374 103.337 1.00 67.03 O
ATOM 13 C1' G B1925 97.512 126.513 103.055 1.00 61.29 C
ATOM 14 N9 G B1925 98.177 127.173 101.936 1.00 61.39 N
ATOM 15 C8 G B1925 99.526 127.324 101.748 1.00 62.50 C
ATOM 16 N7 G B1925 99.822 127.937 100.631 1.00 62.86 N
ATOM 17 C5 G B1925 98.591 128.209 100.046 1.00 60.95 C
ATOM 18 C6 G B1925 98.277 128.836 98.812 1.00 59.72 C
ATOM 19 O6 G B1925 99.041 129.282 97.959 1.00 62.04 O
ATOM 20 N1 G B1925 96.912 128.916 98.610 1.00 57.81 N
ATOM 21 C2 G B1925 95.964 128.455 99.473 1.00 59.06 C
ATOM 22 N2 G B1925 94.697 128.635 99.090 1.00 59.63 N
ATOM 23 N3 G B1925 96.234 127.861 100.627 1.00 60.56 N
ATOM 24 C4 G B1925 97.564 127.767 100.845 1.00 61.47 C
ATOM 25 P U B1926 97.921 122.418 105.119 1.00 61.06 P
ATOM 26 OP1 U B1926 96.480 122.437 104.776 1.00 60.17 O
ATOM 27 OP2 U B1926 98.395 121.529 106.220 1.00 61.48 O
ATOM 28 O5' U B1926 98.774 122.048 103.826 1.00 58.90 O
TER
ATOM 2 P C A1784 106.912 132.542 107.924 1.00 53.00 P
ATOM 3 OP1 C A1784 107.710 131.295 107.766 1.00 50.41 O
ATOM 4 OP2 C A1784 107.464 133.839 107.453 1.00 52.57 O
ATOM 5 O5' C A1784 105.507 132.353 107.198 1.00 53.09 O
ATOM 6 C5' C A1784 104.746 131.143 107.346 1.00 51.74 C
ATOM 7 C4' C A1784 103.602 131.126 106.363 1.00 49.82 C
ATOM 8 O4' C A1784 102.644 132.170 106.688 1.00 49.46 O
ATOM 9 C3' C A1784 103.979 131.433 104.928 1.00 48.85 C
ATOM 10 O3' C A1784 104.521 130.309 104.260 1.00 48.50 O
ATOM 11 C2' C A1784 102.641 131.838 104.341 1.00 49.82 C
ATOM 12 O2' C A1784 101.831 130.722 104.073 1.00 53.36 O
ATOM 13 C1' C A1784 102.037 132.641 105.494 1.00 49.39 C
ATOM 14 N1 C A1784 102.334 134.074 105.324 1.00 49.43 N
ATOM 15 C2 C A1784 101.743 134.752 104.258 1.00 50.44 C
ATOM 16 O2 C A1784 100.938 134.150 103.540 1.00 53.60 O
ATOM 17 N3 C A1784 102.061 136.041 104.034 1.00 51.18 N
ATOM 18 C4 C A1784 102.927 136.659 104.832 1.00 50.22 C
ATOM 19 N4 C A1784 103.245 137.918 104.545 1.00 50.58 N
ATOM 20 C5 C A1784 103.513 136.010 105.953 1.00 49.34 C
ATOM 21 C6 C A1784 103.190 134.729 106.162 1.00 49.20 C
ATOM 22 P G A1785 105.438 130.527 102.959 1.00 48.54 P
ATOM 23 OP1 G A1785 105.881 129.197 102.448 1.00 47.51 O
ATOM 24 OP2 G A1785 106.448 131.569 103.272 1.00 50.65 O
ATOM 25 O5' G A1785 104.453 131.186 101.901 1.00 47.91 O
TER
ATOM 1 O3' A B1924 102.196 125.544 106.942 1.00 58.15 O
ATOM 2 P G B1925 101.524 126.993 106.838 1.00 58.19 P
ATOM 3 OP1 G B1925 102.510 127.884 106.171 1.00 60.24 O
ATOM 4 OP2 G B1925 100.988 127.353 108.178 1.00 57.81 O
ATOM 5 O5' G B1925 100.295 126.790 105.853 1.00 60.18 O
ATOM 6 C5' G B1925 98.943 126.801 106.347 1.00 61.19 C
ATOM 7 C4' G B1925 98.009 126.247 105.302 1.00 61.51 C
ATOM 8 O4' G B1925 97.838 127.203 104.234 1.00 60.44 O
ATOM 9 C3' G B1925 98.521 124.995 104.610 1.00 62.27 C
ATOM 10 O3' G B1925 98.356 123.911 105.565 1.00 61.69 O
ATOM 11 C2' G B1925 97.753 125.007 103.282 1.00 62.19 C
ATOM 12 O2' G B1925 96.500 124.374 103.337 1.00 67.03 O
ATOM 13 C1' G B1925 97.512 126.513 103.055 1.00 61.29 C
ATOM 14 N9 G B1925 98.177 127.173 101.936 1.00 61.39 N
ATOM 15 C8 G B1925 99.526 127.324 101.748 1.00 62.50 C
ATOM 16 N7 G B1925 99.822 127.937 100.631 1.00 62.86 N
ATOM 17 C5 G B1925 98.591 128.209 100.046 1.00 60.95 C
ATOM 18 C6 G B1925 98.277 128.836 98.812 1.00 59.72 C
ATOM 19 O6 G B1925 99.041 129.282 97.959 1.00 62.04 O
ATOM 20 N1 G B1925 96.912 128.916 98.610 1.00 57.81 N
ATOM 21 C2 G B1925 95.964 128.455 99.473 1.00 59.06 C
ATOM 22 N2 G B1925 94.697 128.635 99.090 1.00 59.63 N
ATOM 23 N3 G B1925 96.234 127.861 100.627 1.00 60.56 N
ATOM 24 C4 G B1925 97.564 127.767 100.845 1.00 61.47 C
ATOM 25 P U B1926 97.921 122.418 105.119 1.00 61.06 P
ATOM 26 OP1 U B1926 96.480 122.437 104.776 1.00 60.17 O
ATOM 27 OP2 U B1926 98.395 121.529 106.220 1.00 61.48 O
ATOM 28 O5' U B1926 98.774 122.048 103.826 1.00 58.90 O
TER
Atoms:
C2: (101.743,134.752,104.258)
OP1: (107.710,131.295,107.766)
OP2: (107.464,133.839,107.453)
C4: (102.927,136.659,104.832)
O5': (105.507,132.353,107.198)
C3': (103.979,131.433,104.928)
C1': (102.037,132.641,105.494)
O4': (102.644,132.170,106.688)
C5': (104.746,131.143,107.346)
P: (106.912,132.542,107.924)
O2: (100.938,134.150,103.540)
C4': (103.602,131.126,106.363)
C2': (102.641,131.838,104.341)
O2': (101.831,130.722,104.073)
N1: (102.334,134.074,105.324)
N3: (102.061,136.041,104.034)
N4: (103.245,137.918,104.545)
C6: (103.190,134.729,106.162)
C5: (103.513,136.010,105.953)
O3': (104.521,130.309,104.260)
OP1: (107.710,131.295,107.766)
OP2: (107.464,133.839,107.453)
C4: (102.927,136.659,104.832)
O5': (105.507,132.353,107.198)
C3': (103.979,131.433,104.928)
C1': (102.037,132.641,105.494)
O4': (102.644,132.170,106.688)
C5': (104.746,131.143,107.346)
P: (106.912,132.542,107.924)
O2: (100.938,134.150,103.540)
C4': (103.602,131.126,106.363)
C2': (102.641,131.838,104.341)
O2': (101.831,130.722,104.073)
N1: (102.334,134.074,105.324)
N3: (102.061,136.041,104.034)
N4: (103.245,137.918,104.545)
C6: (103.190,134.729,106.162)
C5: (103.513,136.010,105.953)
O3': (104.521,130.309,104.260)
OP1: (102.510,127.884,106.171)
OP2: (100.988,127.353,108.178)
C3': (98.521,124.995,104.610)
C1': (97.512,126.513,103.055)
C5': (98.943,126.801,106.347)
O6: (99.041,129.282,97.959)
O4': (97.838,127.203,104.234)
C8: (99.526,127.324,101.748)
C2: (95.964,128.455,99.473)
C6: (98.277,128.836,98.812)
C5: (98.591,128.209,100.046)
C4: (97.564,127.767,100.845)
P: (101.524,126.993,106.838)
C4': (98.009,126.247,105.302)
C2': (97.753,125.007,103.282)
O2': (96.500,124.374,103.337)
N1: (96.912,128.916,98.610)
N2: (94.697,128.635,99.090)
N3: (96.234,127.861,100.627)
N7: (99.822,127.937,100.631)
N9: (98.177,127.173,101.936)
O5': (100.295,126.790,105.853)
O3': (98.356,123.911,105.565)
OP2: (100.988,127.353,108.178)
C3': (98.521,124.995,104.610)
C1': (97.512,126.513,103.055)
C5': (98.943,126.801,106.347)
O6: (99.041,129.282,97.959)
O4': (97.838,127.203,104.234)
C8: (99.526,127.324,101.748)
C2: (95.964,128.455,99.473)
C6: (98.277,128.836,98.812)
C5: (98.591,128.209,100.046)
C4: (97.564,127.767,100.845)
P: (101.524,126.993,106.838)
C4': (98.009,126.247,105.302)
C2': (97.753,125.007,103.282)
O2': (96.500,124.374,103.337)
N1: (96.912,128.916,98.610)
N2: (94.697,128.635,99.090)
N3: (96.234,127.861,100.627)
N7: (99.822,127.937,100.631)
N9: (98.177,127.173,101.936)
O5': (100.295,126.790,105.853)
O3': (98.356,123.911,105.565)
Image (generated by PyMOL):