Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2RD2:B25:B39
Extra
PDB:
ATOM 1 O3' C A 24 21.380 4.822 33.666 1.00 82.63 O
ATOM 2 P C A 25 20.759 3.356 33.432 1.00102.00 P
ATOM 3 OP1 C A 25 21.520 2.390 34.268 1.00 87.34 O
ATOM 4 OP2 C A 25 20.644 3.128 31.967 1.00 89.97 O
ATOM 5 O5' C A 25 19.282 3.493 34.012 1.00100.47 O
ATOM 6 C5' C A 25 19.064 3.978 35.333 1.00102.02 C
ATOM 7 C4' C A 25 17.592 4.204 35.564 1.00101.53 C
ATOM 8 O4' C A 25 17.142 5.362 34.815 1.00 97.33 O
ATOM 9 C3' C A 25 16.700 3.076 35.077 1.00104.81 C
ATOM 10 O3' C A 25 16.636 2.033 36.036 1.00112.74 O
ATOM 11 C2' C A 25 15.364 3.781 34.878 1.00100.98 C
ATOM 12 O2' C A 25 14.637 3.953 36.077 1.00 98.39 O
ATOM 13 C1' C A 25 15.821 5.140 34.343 1.00 96.79 C
ATOM 14 N1 C A 25 15.849 5.191 32.875 1.00 72.56 N
ATOM 15 C2 C A 25 14.673 5.507 32.189 1.00 70.97 C
ATOM 16 O2 C A 25 13.642 5.732 32.839 1.00 74.06 O
ATOM 17 N3 C A 25 14.691 5.562 30.838 1.00 69.94 N
ATOM 18 C4 C A 25 15.823 5.311 30.176 1.00 69.19 C
ATOM 19 N4 C A 25 15.797 5.373 28.842 1.00 68.31 N
ATOM 20 C5 C A 25 17.036 4.984 30.853 1.00 72.31 C
ATOM 21 C6 C A 25 17.004 4.934 32.189 1.00 70.24 C
ATOM 22 P G A 26 16.131 0.581 35.586 1.00105.69 P
ATOM 23 OP1 G A 26 16.306 -0.356 36.724 1.00 96.13 O
ATOM 24 OP2 G A 26 16.762 0.273 34.277 1.00 93.05 O
ATOM 25 O5' G A 26 14.574 0.801 35.348 1.00107.83 O
TER
ATOM 1 O3' C B 38 5.090 6.467 23.004 1.00116.09 O
ATOM 2 P G B 39 5.325 7.952 23.560 1.00101.53 P
ATOM 3 OP1 G B 39 4.032 8.678 23.501 1.00102.82 O
ATOM 4 OP2 G B 39 6.508 8.505 22.856 1.00104.15 O
ATOM 5 O5' G B 39 5.710 7.711 25.086 1.00 98.37 O
ATOM 6 C5' G B 39 4.770 7.121 25.972 1.00 94.27 C
ATOM 7 C4' G B 39 5.401 6.846 27.314 1.00 92.29 C
ATOM 8 O4' G B 39 6.386 5.788 27.202 1.00 87.77 O
ATOM 9 C3' G B 39 6.191 7.976 27.944 1.00 91.50 C
ATOM 10 O3' G B 39 5.347 8.951 28.539 1.00 93.85 O
ATOM 11 C2' G B 39 7.003 7.225 28.991 1.00 89.26 C
ATOM 12 O2' G B 39 6.254 6.917 30.148 1.00 87.44 O
ATOM 13 C1' G B 39 7.344 5.935 28.240 1.00 89.17 C
ATOM 14 N9 G B 39 8.678 5.993 27.654 1.00 91.13 N
ATOM 15 C8 G B 39 9.009 6.129 26.328 1.00 91.75 C
ATOM 16 N7 G B 39 10.298 6.187 26.126 1.00 92.17 N
ATOM 17 C5 G B 39 10.849 6.076 27.396 1.00 90.25 C
ATOM 18 C6 G B 39 12.204 6.083 27.814 1.00 90.76 C
ATOM 19 O6 G B 39 13.222 6.200 27.125 1.00 92.64 O
ATOM 20 N1 G B 39 12.313 5.939 29.193 1.00 86.32 N
ATOM 21 C2 G B 39 11.256 5.809 30.059 1.00 84.31 C
ATOM 22 N2 G B 39 11.564 5.677 31.356 1.00 82.93 N
ATOM 23 N3 G B 39 9.990 5.807 29.682 1.00 85.67 N
ATOM 24 C4 G B 39 9.862 5.944 28.347 1.00 89.02 C
ATOM 25 P G B 40 5.931 10.413 28.861 1.00108.53 P
ATOM 26 OP1 G B 40 4.830 11.251 29.398 1.00123.22 O
ATOM 27 OP2 G B 40 6.691 10.875 27.672 1.00118.86 O
ATOM 28 O5' G B 40 6.963 10.151 30.042 1.00100.67 O
TER
ATOM 2 P C A 25 20.759 3.356 33.432 1.00102.00 P
ATOM 3 OP1 C A 25 21.520 2.390 34.268 1.00 87.34 O
ATOM 4 OP2 C A 25 20.644 3.128 31.967 1.00 89.97 O
ATOM 5 O5' C A 25 19.282 3.493 34.012 1.00100.47 O
ATOM 6 C5' C A 25 19.064 3.978 35.333 1.00102.02 C
ATOM 7 C4' C A 25 17.592 4.204 35.564 1.00101.53 C
ATOM 8 O4' C A 25 17.142 5.362 34.815 1.00 97.33 O
ATOM 9 C3' C A 25 16.700 3.076 35.077 1.00104.81 C
ATOM 10 O3' C A 25 16.636 2.033 36.036 1.00112.74 O
ATOM 11 C2' C A 25 15.364 3.781 34.878 1.00100.98 C
ATOM 12 O2' C A 25 14.637 3.953 36.077 1.00 98.39 O
ATOM 13 C1' C A 25 15.821 5.140 34.343 1.00 96.79 C
ATOM 14 N1 C A 25 15.849 5.191 32.875 1.00 72.56 N
ATOM 15 C2 C A 25 14.673 5.507 32.189 1.00 70.97 C
ATOM 16 O2 C A 25 13.642 5.732 32.839 1.00 74.06 O
ATOM 17 N3 C A 25 14.691 5.562 30.838 1.00 69.94 N
ATOM 18 C4 C A 25 15.823 5.311 30.176 1.00 69.19 C
ATOM 19 N4 C A 25 15.797 5.373 28.842 1.00 68.31 N
ATOM 20 C5 C A 25 17.036 4.984 30.853 1.00 72.31 C
ATOM 21 C6 C A 25 17.004 4.934 32.189 1.00 70.24 C
ATOM 22 P G A 26 16.131 0.581 35.586 1.00105.69 P
ATOM 23 OP1 G A 26 16.306 -0.356 36.724 1.00 96.13 O
ATOM 24 OP2 G A 26 16.762 0.273 34.277 1.00 93.05 O
ATOM 25 O5' G A 26 14.574 0.801 35.348 1.00107.83 O
TER
ATOM 1 O3' C B 38 5.090 6.467 23.004 1.00116.09 O
ATOM 2 P G B 39 5.325 7.952 23.560 1.00101.53 P
ATOM 3 OP1 G B 39 4.032 8.678 23.501 1.00102.82 O
ATOM 4 OP2 G B 39 6.508 8.505 22.856 1.00104.15 O
ATOM 5 O5' G B 39 5.710 7.711 25.086 1.00 98.37 O
ATOM 6 C5' G B 39 4.770 7.121 25.972 1.00 94.27 C
ATOM 7 C4' G B 39 5.401 6.846 27.314 1.00 92.29 C
ATOM 8 O4' G B 39 6.386 5.788 27.202 1.00 87.77 O
ATOM 9 C3' G B 39 6.191 7.976 27.944 1.00 91.50 C
ATOM 10 O3' G B 39 5.347 8.951 28.539 1.00 93.85 O
ATOM 11 C2' G B 39 7.003 7.225 28.991 1.00 89.26 C
ATOM 12 O2' G B 39 6.254 6.917 30.148 1.00 87.44 O
ATOM 13 C1' G B 39 7.344 5.935 28.240 1.00 89.17 C
ATOM 14 N9 G B 39 8.678 5.993 27.654 1.00 91.13 N
ATOM 15 C8 G B 39 9.009 6.129 26.328 1.00 91.75 C
ATOM 16 N7 G B 39 10.298 6.187 26.126 1.00 92.17 N
ATOM 17 C5 G B 39 10.849 6.076 27.396 1.00 90.25 C
ATOM 18 C6 G B 39 12.204 6.083 27.814 1.00 90.76 C
ATOM 19 O6 G B 39 13.222 6.200 27.125 1.00 92.64 O
ATOM 20 N1 G B 39 12.313 5.939 29.193 1.00 86.32 N
ATOM 21 C2 G B 39 11.256 5.809 30.059 1.00 84.31 C
ATOM 22 N2 G B 39 11.564 5.677 31.356 1.00 82.93 N
ATOM 23 N3 G B 39 9.990 5.807 29.682 1.00 85.67 N
ATOM 24 C4 G B 39 9.862 5.944 28.347 1.00 89.02 C
ATOM 25 P G B 40 5.931 10.413 28.861 1.00108.53 P
ATOM 26 OP1 G B 40 4.830 11.251 29.398 1.00123.22 O
ATOM 27 OP2 G B 40 6.691 10.875 27.672 1.00118.86 O
ATOM 28 O5' G B 40 6.963 10.151 30.042 1.00100.67 O
TER
Atoms:
C2: (14.673,5.507,32.189)
OP1: (21.520,2.390,34.268)
OP2: (20.644,3.128,31.967)
C4: (15.823,5.311,30.176)
O5': (19.282,3.493,34.012)
C3': (16.700,3.076,35.077)
C1': (15.821,5.140,34.343)
O4': (17.142,5.362,34.815)
C5': (19.064,3.978,35.333)
P: (20.759,3.356,33.432)
O2: (13.642,5.732,32.839)
C4': (17.592,4.204,35.564)
C2': (15.364,3.781,34.878)
O2': (14.637,3.953,36.077)
N1: (15.849,5.191,32.875)
N3: (14.691,5.562,30.838)
N4: (15.797,5.373,28.842)
C6: (17.004,4.934,32.189)
C5: (17.036,4.984,30.853)
O3': (16.636,2.033,36.036)
OP1: (21.520,2.390,34.268)
OP2: (20.644,3.128,31.967)
C4: (15.823,5.311,30.176)
O5': (19.282,3.493,34.012)
C3': (16.700,3.076,35.077)
C1': (15.821,5.140,34.343)
O4': (17.142,5.362,34.815)
C5': (19.064,3.978,35.333)
P: (20.759,3.356,33.432)
O2: (13.642,5.732,32.839)
C4': (17.592,4.204,35.564)
C2': (15.364,3.781,34.878)
O2': (14.637,3.953,36.077)
N1: (15.849,5.191,32.875)
N3: (14.691,5.562,30.838)
N4: (15.797,5.373,28.842)
C6: (17.004,4.934,32.189)
C5: (17.036,4.984,30.853)
O3': (16.636,2.033,36.036)
OP1: (4.032,8.678,23.501)
OP2: (6.508,8.505,22.856)
C3': (6.191,7.976,27.944)
C1': (7.344,5.935,28.240)
C5': (4.770,7.121,25.972)
O6: (13.222,6.200,27.125)
O4': (6.386,5.788,27.202)
C8: (9.009,6.129,26.328)
C2: (11.256,5.809,30.059)
C6: (12.204,6.083,27.814)
C5: (10.849,6.076,27.396)
C4: (9.862,5.944,28.347)
P: (5.325,7.952,23.560)
C4': (5.401,6.846,27.314)
C2': (7.003,7.225,28.991)
O2': (6.254,6.917,30.148)
N1: (12.313,5.939,29.193)
N2: (11.564,5.677,31.356)
N3: (9.990,5.807,29.682)
N7: (10.298,6.187,26.126)
N9: (8.678,5.993,27.654)
O5': (5.710,7.711,25.086)
O3': (5.347,8.951,28.539)
OP2: (6.508,8.505,22.856)
C3': (6.191,7.976,27.944)
C1': (7.344,5.935,28.240)
C5': (4.770,7.121,25.972)
O6: (13.222,6.200,27.125)
O4': (6.386,5.788,27.202)
C8: (9.009,6.129,26.328)
C2: (11.256,5.809,30.059)
C6: (12.204,6.083,27.814)
C5: (10.849,6.076,27.396)
C4: (9.862,5.944,28.347)
P: (5.325,7.952,23.560)
C4': (5.401,6.846,27.314)
C2': (7.003,7.225,28.991)
O2': (6.254,6.917,30.148)
N1: (12.313,5.939,29.193)
N2: (11.564,5.677,31.356)
N3: (9.990,5.807,29.682)
N7: (10.298,6.187,26.126)
N9: (8.678,5.993,27.654)
O5': (5.710,7.711,25.086)
O3': (5.347,8.951,28.539)
Image (generated by PyMOL):