Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1757:A1889
Extra
PDB:
ATOM 1 O3' G A1756 65.461 -0.717 -1.431 1.00 39.92 O
ATOM 2 P C A1757 66.134 0.284 -2.475 1.00 59.91 P
ATOM 3 OP1 C A1757 65.739 1.667 -2.061 1.00 58.85 O
ATOM 4 OP2 C A1757 65.785 -0.189 -3.849 1.00 57.70 O
ATOM 5 O5' C A1757 67.678 0.057 -2.215 1.00 53.07 O
ATOM 6 C5' C A1757 68.244 0.402 -0.966 1.00 52.62 C
ATOM 7 C4' C A1757 69.644 -0.109 -0.846 1.00 46.16 C
ATOM 8 O4' C A1757 69.622 -1.546 -0.711 1.00 51.25 O
ATOM 9 C3' C A1757 70.543 0.129 -2.044 1.00 42.21 C
ATOM 10 O3' C A1757 71.060 1.439 -2.089 1.00 45.93 O
ATOM 11 C2' C A1757 71.613 -0.913 -1.851 1.00 46.58 C
ATOM 12 O2' C A1757 72.544 -0.470 -0.883 1.00 45.56 O
ATOM 13 C1' C A1757 70.803 -2.081 -1.261 1.00 55.23 C
ATOM 14 N1 C A1757 70.448 -3.074 -2.292 1.00 49.84 N
ATOM 15 C2 C A1757 71.478 -3.930 -2.656 1.00 50.71 C
ATOM 16 O2 C A1757 72.558 -3.780 -2.059 1.00 51.41 O
ATOM 17 N3 C A1757 71.278 -4.865 -3.617 1.00 47.31 N
ATOM 18 C4 C A1757 70.098 -4.949 -4.202 1.00 40.22 C
ATOM 19 N4 C A1757 69.951 -5.886 -5.129 1.00 42.42 N
ATOM 20 C5 C A1757 69.023 -4.089 -3.842 1.00 49.31 C
ATOM 21 C6 C A1757 69.230 -3.159 -2.895 1.00 49.94 C
ATOM 22 P U A1758 71.712 1.995 -3.452 1.00 57.47 P
ATOM 23 OP1 U A1758 72.422 3.250 -3.099 1.00 61.01 O
ATOM 24 OP2 U A1758 70.629 2.040 -4.482 1.00 56.08 O
ATOM 25 O5' U A1758 72.760 0.859 -3.818 1.00 41.28 O
TER
ATOM 1 O3' A B1888 76.309 -14.690 -8.039 1.00 31.73 O
ATOM 2 P G B1889 76.375 -14.661 -6.446 1.00 29.71 P
ATOM 3 OP1 G B1889 77.460 -15.614 -6.075 1.00 39.80 O
ATOM 4 OP2 G B1889 75.023 -14.896 -5.926 1.00 30.90 O
ATOM 5 O5' G B1889 76.817 -13.161 -6.114 1.00 51.14 O
ATOM 6 C5' G B1889 78.202 -12.794 -6.013 1.00 51.25 C
ATOM 7 C4' G B1889 78.423 -11.683 -5.010 1.00 36.98 C
ATOM 8 O4' G B1889 77.938 -10.420 -5.546 1.00 40.10 O
ATOM 9 C3' G B1889 77.691 -11.854 -3.693 1.00 43.50 C
ATOM 10 O3' G B1889 78.431 -12.613 -2.771 1.00 41.30 O
ATOM 11 C2' G B1889 77.440 -10.429 -3.228 1.00 42.63 C
ATOM 12 O2' G B1889 78.602 -9.903 -2.606 1.00 40.30 O
ATOM 13 C1' G B1889 77.244 -9.702 -4.547 1.00 44.79 C
ATOM 14 N9 G B1889 75.825 -9.581 -4.944 1.00 37.01 N
ATOM 15 C8 G B1889 75.154 -10.361 -5.853 1.00 43.05 C
ATOM 16 N7 G B1889 73.925 -9.972 -6.078 1.00 46.57 N
ATOM 17 C5 G B1889 73.783 -8.830 -5.288 1.00 45.42 C
ATOM 18 C6 G B1889 72.674 -7.933 -5.109 1.00 41.36 C
ATOM 19 O6 G B1889 71.543 -7.928 -5.609 1.00 42.36 O
ATOM 20 N1 G B1889 72.977 -6.931 -4.216 1.00 40.52 N
ATOM 21 C2 G B1889 74.191 -6.796 -3.605 1.00 40.08 C
ATOM 22 N2 G B1889 74.282 -5.756 -2.784 1.00 42.30 N
ATOM 23 N3 G B1889 75.234 -7.592 -3.763 1.00 37.10 N
ATOM 24 C4 G B1889 74.961 -8.585 -4.606 1.00 36.00 C
ATOM 25 P C B1890 77.687 -13.419 -1.618 1.00 42.51 P
ATOM 26 OP1 C B1890 78.733 -14.184 -0.886 1.00 45.57 O
ATOM 27 OP2 C B1890 76.588 -14.158 -2.264 1.00 57.17 O
ATOM 28 O5' C B1890 77.085 -12.269 -0.694 1.00 29.81 O
TER
ATOM 2 P C A1757 66.134 0.284 -2.475 1.00 59.91 P
ATOM 3 OP1 C A1757 65.739 1.667 -2.061 1.00 58.85 O
ATOM 4 OP2 C A1757 65.785 -0.189 -3.849 1.00 57.70 O
ATOM 5 O5' C A1757 67.678 0.057 -2.215 1.00 53.07 O
ATOM 6 C5' C A1757 68.244 0.402 -0.966 1.00 52.62 C
ATOM 7 C4' C A1757 69.644 -0.109 -0.846 1.00 46.16 C
ATOM 8 O4' C A1757 69.622 -1.546 -0.711 1.00 51.25 O
ATOM 9 C3' C A1757 70.543 0.129 -2.044 1.00 42.21 C
ATOM 10 O3' C A1757 71.060 1.439 -2.089 1.00 45.93 O
ATOM 11 C2' C A1757 71.613 -0.913 -1.851 1.00 46.58 C
ATOM 12 O2' C A1757 72.544 -0.470 -0.883 1.00 45.56 O
ATOM 13 C1' C A1757 70.803 -2.081 -1.261 1.00 55.23 C
ATOM 14 N1 C A1757 70.448 -3.074 -2.292 1.00 49.84 N
ATOM 15 C2 C A1757 71.478 -3.930 -2.656 1.00 50.71 C
ATOM 16 O2 C A1757 72.558 -3.780 -2.059 1.00 51.41 O
ATOM 17 N3 C A1757 71.278 -4.865 -3.617 1.00 47.31 N
ATOM 18 C4 C A1757 70.098 -4.949 -4.202 1.00 40.22 C
ATOM 19 N4 C A1757 69.951 -5.886 -5.129 1.00 42.42 N
ATOM 20 C5 C A1757 69.023 -4.089 -3.842 1.00 49.31 C
ATOM 21 C6 C A1757 69.230 -3.159 -2.895 1.00 49.94 C
ATOM 22 P U A1758 71.712 1.995 -3.452 1.00 57.47 P
ATOM 23 OP1 U A1758 72.422 3.250 -3.099 1.00 61.01 O
ATOM 24 OP2 U A1758 70.629 2.040 -4.482 1.00 56.08 O
ATOM 25 O5' U A1758 72.760 0.859 -3.818 1.00 41.28 O
TER
ATOM 1 O3' A B1888 76.309 -14.690 -8.039 1.00 31.73 O
ATOM 2 P G B1889 76.375 -14.661 -6.446 1.00 29.71 P
ATOM 3 OP1 G B1889 77.460 -15.614 -6.075 1.00 39.80 O
ATOM 4 OP2 G B1889 75.023 -14.896 -5.926 1.00 30.90 O
ATOM 5 O5' G B1889 76.817 -13.161 -6.114 1.00 51.14 O
ATOM 6 C5' G B1889 78.202 -12.794 -6.013 1.00 51.25 C
ATOM 7 C4' G B1889 78.423 -11.683 -5.010 1.00 36.98 C
ATOM 8 O4' G B1889 77.938 -10.420 -5.546 1.00 40.10 O
ATOM 9 C3' G B1889 77.691 -11.854 -3.693 1.00 43.50 C
ATOM 10 O3' G B1889 78.431 -12.613 -2.771 1.00 41.30 O
ATOM 11 C2' G B1889 77.440 -10.429 -3.228 1.00 42.63 C
ATOM 12 O2' G B1889 78.602 -9.903 -2.606 1.00 40.30 O
ATOM 13 C1' G B1889 77.244 -9.702 -4.547 1.00 44.79 C
ATOM 14 N9 G B1889 75.825 -9.581 -4.944 1.00 37.01 N
ATOM 15 C8 G B1889 75.154 -10.361 -5.853 1.00 43.05 C
ATOM 16 N7 G B1889 73.925 -9.972 -6.078 1.00 46.57 N
ATOM 17 C5 G B1889 73.783 -8.830 -5.288 1.00 45.42 C
ATOM 18 C6 G B1889 72.674 -7.933 -5.109 1.00 41.36 C
ATOM 19 O6 G B1889 71.543 -7.928 -5.609 1.00 42.36 O
ATOM 20 N1 G B1889 72.977 -6.931 -4.216 1.00 40.52 N
ATOM 21 C2 G B1889 74.191 -6.796 -3.605 1.00 40.08 C
ATOM 22 N2 G B1889 74.282 -5.756 -2.784 1.00 42.30 N
ATOM 23 N3 G B1889 75.234 -7.592 -3.763 1.00 37.10 N
ATOM 24 C4 G B1889 74.961 -8.585 -4.606 1.00 36.00 C
ATOM 25 P C B1890 77.687 -13.419 -1.618 1.00 42.51 P
ATOM 26 OP1 C B1890 78.733 -14.184 -0.886 1.00 45.57 O
ATOM 27 OP2 C B1890 76.588 -14.158 -2.264 1.00 57.17 O
ATOM 28 O5' C B1890 77.085 -12.269 -0.694 1.00 29.81 O
TER
Atoms:
C2: (71.478,-3.930,-2.656)
OP1: (65.739,1.667,-2.061)
OP2: (65.785,-0.189,-3.849)
C4: (70.098,-4.949,-4.202)
O5': (67.678,0.057,-2.215)
C3': (70.543,0.129,-2.044)
C1': (70.803,-2.081,-1.261)
O4': (69.622,-1.546,-0.711)
C5': (68.244,0.402,-0.966)
P: (66.134,0.284,-2.475)
O2: (72.558,-3.780,-2.059)
C4': (69.644,-0.109,-0.846)
C2': (71.613,-0.913,-1.851)
O2': (72.544,-0.470,-0.883)
N1: (70.448,-3.074,-2.292)
N3: (71.278,-4.865,-3.617)
N4: (69.951,-5.886,-5.129)
C6: (69.230,-3.159,-2.895)
C5: (69.023,-4.089,-3.842)
O3': (71.060,1.439,-2.089)
OP1: (65.739,1.667,-2.061)
OP2: (65.785,-0.189,-3.849)
C4: (70.098,-4.949,-4.202)
O5': (67.678,0.057,-2.215)
C3': (70.543,0.129,-2.044)
C1': (70.803,-2.081,-1.261)
O4': (69.622,-1.546,-0.711)
C5': (68.244,0.402,-0.966)
P: (66.134,0.284,-2.475)
O2: (72.558,-3.780,-2.059)
C4': (69.644,-0.109,-0.846)
C2': (71.613,-0.913,-1.851)
O2': (72.544,-0.470,-0.883)
N1: (70.448,-3.074,-2.292)
N3: (71.278,-4.865,-3.617)
N4: (69.951,-5.886,-5.129)
C6: (69.230,-3.159,-2.895)
C5: (69.023,-4.089,-3.842)
O3': (71.060,1.439,-2.089)
OP1: (77.460,-15.614,-6.075)
OP2: (75.023,-14.896,-5.926)
C3': (77.691,-11.854,-3.693)
C1': (77.244,-9.702,-4.547)
C5': (78.202,-12.794,-6.013)
O6: (71.543,-7.928,-5.609)
O4': (77.938,-10.420,-5.546)
C8: (75.154,-10.361,-5.853)
C2: (74.191,-6.796,-3.605)
C6: (72.674,-7.933,-5.109)
C5: (73.783,-8.830,-5.288)
C4: (74.961,-8.585,-4.606)
P: (76.375,-14.661,-6.446)
C4': (78.423,-11.683,-5.010)
C2': (77.440,-10.429,-3.228)
O2': (78.602,-9.903,-2.606)
N1: (72.977,-6.931,-4.216)
N2: (74.282,-5.756,-2.784)
N3: (75.234,-7.592,-3.763)
N7: (73.925,-9.972,-6.078)
N9: (75.825,-9.581,-4.944)
O5': (76.817,-13.161,-6.114)
O3': (78.431,-12.613,-2.771)
OP2: (75.023,-14.896,-5.926)
C3': (77.691,-11.854,-3.693)
C1': (77.244,-9.702,-4.547)
C5': (78.202,-12.794,-6.013)
O6: (71.543,-7.928,-5.609)
O4': (77.938,-10.420,-5.546)
C8: (75.154,-10.361,-5.853)
C2: (74.191,-6.796,-3.605)
C6: (72.674,-7.933,-5.109)
C5: (73.783,-8.830,-5.288)
C4: (74.961,-8.585,-4.606)
P: (76.375,-14.661,-6.446)
C4': (78.423,-11.683,-5.010)
C2': (77.440,-10.429,-3.228)
O2': (78.602,-9.903,-2.606)
N1: (72.977,-6.931,-4.216)
N2: (74.282,-5.756,-2.784)
N3: (75.234,-7.592,-3.763)
N7: (73.925,-9.972,-6.078)
N9: (75.825,-9.581,-4.944)
O5': (76.817,-13.161,-6.114)
O3': (78.431,-12.613,-2.771)
Image (generated by PyMOL):