ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:92:924

Extra

PDB:
ATOM 1 O3' U A 1 54.067 11.581 102.998 1.00117.54 O
ATOM 2 P A A 2 54.227 12.488 101.677 1.00111.71 P
ATOM 3 OP1 A A 2 52.926 13.154 101.400 1.00111.99 O
ATOM 4 OP2 A A 2 54.860 11.661 100.621 1.00111.72 O
ATOM 5 O5' A A 2 55.283 13.599 102.108 1.00105.47 O
ATOM 6 C5' A A 2 54.867 14.846 102.696 1.00 93.71 C
ATOM 7 C4' A A 2 56.073 15.618 103.169 1.00 85.85 C
ATOM 8 O4' A A 2 56.695 14.913 104.270 1.00 84.46 O
ATOM 9 C3' A A 2 57.178 15.794 102.137 1.00 81.66 C
ATOM 10 O3' A A 2 57.935 16.972 102.404 1.00 74.67 O
ATOM 11 C2' A A 2 57.999 14.519 102.316 1.00 81.67 C
ATOM 12 O2' A A 2 59.356 14.653 101.943 1.00 82.46 O
ATOM 13 C1' A A 2 57.852 14.232 103.815 1.00 82.32 C
ATOM 14 N9 A A 2 57.678 12.805 104.117 1.00 80.90 N
ATOM 15 C8 A A 2 57.457 11.772 103.236 1.00 79.34 C
ATOM 16 N7 A A 2 57.351 10.599 103.807 1.00 78.87 N
ATOM 17 C5 A A 2 57.509 10.870 105.157 1.00 79.04 C
ATOM 18 C6 A A 2 57.501 10.043 106.292 1.00 79.16 C
ATOM 19 N6 A A 2 57.337 8.719 106.242 1.00 78.79 N
ATOM 20 N1 A A 2 57.673 10.629 107.497 1.00 79.92 N
ATOM 21 C2 A A 2 57.850 11.954 107.547 1.00 79.66 C
ATOM 22 N3 A A 2 57.886 12.838 106.551 1.00 80.24 N
ATOM 23 C4 A A 2 57.706 12.225 105.366 1.00 80.18 C
ATOM 24 P G A 3 57.830 18.234 101.409 1.00 68.55 P
ATOM 25 OP1 G A 3 59.040 19.066 101.614 1.00 69.45 O
ATOM 26 OP2 G A 3 56.491 18.832 101.621 1.00 68.03 O
ATOM 27 O5' G A 3 57.880 17.616 99.935 1.00 63.84 O
TER

ATOM 1 O3' U B 23 61.835 1.123 99.906 1.00121.02 O
ATOM 2 P G B 24 62.010 2.567 99.218 1.00117.47 P
ATOM 3 OP1 G B 24 62.803 2.379 97.971 1.00117.65 O
ATOM 4 OP2 G B 24 62.489 3.520 100.255 1.00117.26 O
ATOM 5 O5' G B 24 60.524 2.983 98.816 1.00112.32 O
ATOM 6 C5' G B 24 59.947 2.597 97.549 1.00103.05 C
ATOM 7 C4' G B 24 58.810 3.528 97.201 1.00 96.29 C
ATOM 8 O4' G B 24 57.804 3.439 98.245 1.00 94.71 O
ATOM 9 C3' G B 24 59.188 5.001 97.174 1.00 92.66 C
ATOM 10 O3' G B 24 59.733 5.394 95.922 1.00 87.30 O
ATOM 11 C2' G B 24 57.870 5.687 97.492 1.00 92.07 C
ATOM 12 O2' G B 24 57.001 5.751 96.380 1.00 91.86 O
ATOM 13 C1' G B 24 57.295 4.731 98.538 1.00 92.50 C
ATOM 14 N9 G B 24 57.687 5.077 99.904 1.00 91.17 N
ATOM 15 C8 G B 24 58.489 4.350 100.754 1.00 90.49 C
ATOM 16 N7 G B 24 58.660 4.923 101.914 1.00 90.12 N
ATOM 17 C5 G B 24 57.928 6.100 101.826 1.00 90.07 C
ATOM 18 C6 G B 24 57.737 7.140 102.775 1.00 89.91 C
ATOM 19 O6 G B 24 58.188 7.230 103.923 1.00 89.43 O
ATOM 20 N1 G B 24 56.925 8.149 102.269 1.00 89.84 N
ATOM 21 C2 G B 24 56.370 8.160 101.013 1.00 90.24 C
ATOM 22 N2 G B 24 55.620 9.221 100.707 1.00 90.70 N
ATOM 23 N3 G B 24 56.539 7.201 100.123 1.00 90.32 N
ATOM 24 C4 G B 24 57.322 6.209 100.592 1.00 90.29 C
ATOM 25 P C B 25 60.923 6.471 95.878 1.00 81.27 P
ATOM 26 OP1 C B 25 61.180 6.746 94.444 1.00 80.52 O
ATOM 27 OP2 C B 25 62.029 5.991 96.748 1.00 81.65 O
ATOM 28 O5' C B 25 60.285 7.768 96.545 1.00 78.33 O
TER

Atoms:
OP1: (52.926,13.154,101.400)
OP2: (54.860,11.661,100.621)
C3': (57.178,15.794,102.137)
C1': (57.852,14.232,103.815)
C5': (54.867,14.846,102.696)
O4': (56.695,14.913,104.270)
C8: (57.457,11.772,103.236)
O2': (59.356,14.653,101.943)
C6: (57.501,10.043,106.292)
C5: (57.509,10.870,105.157)
C4: (57.706,12.225,105.366)
P: (54.227,12.488,101.677)
C4': (56.073,15.618,103.169)
C2': (57.999,14.519,102.316)
C2: (57.850,11.954,107.547)
N1: (57.673,10.629,107.497)
N3: (57.886,12.838,106.551)
N6: (57.337,8.719,106.242)
N7: (57.351,10.599,103.807)
N9: (57.678,12.805,104.117)
O5': (55.283,13.599,102.108)
O3': (57.935,16.972,102.404)
OP1: (62.803,2.379,97.971)
OP2: (62.489,3.520,100.255)
C3': (59.188,5.001,97.174)
C1': (57.295,4.731,98.538)
C5': (59.947,2.597,97.549)
O6: (58.188,7.230,103.923)
O4': (57.804,3.439,98.245)
C8: (58.489,4.350,100.754)
C2: (56.370,8.160,101.013)
C6: (57.737,7.140,102.775)
C5: (57.928,6.100,101.826)
C4: (57.322,6.209,100.592)
P: (62.010,2.567,99.218)
C4': (58.810,3.528,97.201)
C2': (57.870,5.687,97.492)
O2': (57.001,5.751,96.380)
N1: (56.925,8.149,102.269)
N2: (55.620,9.221,100.707)
N3: (56.539,7.201,100.123)
N7: (58.660,4.923,101.914)
N9: (57.687,5.077,99.904)
O5': (60.524,2.983,98.816)
O3': (59.733,5.394,95.922)
Image (generated by PyMOL):
PyMOL image
show in jmol