ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2XNZ:A18:A19

Extra

PDB:
ATOM 1 O3' A A 17 41.556 -8.560 1.966 1.00 18.18 O
ATOM 2 P U A 18 43.104 -8.632 2.264 1.00 19.47 P
ATOM 3 OP1 U A 18 43.802 -8.533 0.950 1.00 21.79 O
ATOM 4 OP2 U A 18 43.388 -9.761 3.200 1.00 19.38 O
ATOM 5 O5' U A 18 43.387 -7.295 3.074 1.00 17.17 O
ATOM 6 C5' U A 18 43.133 -6.030 2.455 1.00 16.62 C
ATOM 7 C4' U A 18 43.296 -4.967 3.529 1.00 16.73 C
ATOM 8 O4' U A 18 42.414 -5.307 4.640 1.00 15.12 O
ATOM 9 C3' U A 18 44.708 -4.845 4.084 1.00 17.32 C
ATOM 10 O3' U A 18 45.041 -3.501 4.207 1.00 18.25 O
ATOM 11 C2' U A 18 44.583 -5.435 5.485 1.00 17.35 C
ATOM 12 O2' U A 18 45.481 -4.895 6.430 1.00 17.94 O
ATOM 13 C1' U A 18 43.125 -5.116 5.830 1.00 15.31 C
ATOM 14 N1 U A 18 42.752 -6.129 6.859 1.00 16.50 N
ATOM 15 C2 U A 18 42.663 -5.747 8.187 1.00 15.83 C
ATOM 16 O2 U A 18 42.786 -4.599 8.591 1.00 13.82 O
ATOM 17 N3 U A 18 42.381 -6.798 9.043 1.00 14.36 N
ATOM 18 C4 U A 18 42.219 -8.136 8.691 1.00 16.78 C
ATOM 19 O4 U A 18 41.966 -8.963 9.565 1.00 16.69 O
ATOM 20 C5 U A 18 42.344 -8.439 7.292 1.00 13.81 C
ATOM 21 C6 U A 18 42.623 -7.441 6.448 1.00 15.98 C
ATOM 22 P A A 19 46.074 -2.827 3.190 1.00 17.08 P
ATOM 23 OP1 A A 19 45.714 -3.214 1.812 1.00 18.30 O
ATOM 24 OP2 A A 19 47.442 -3.082 3.672 1.00 18.14 O
ATOM 25 O5' A A 19 45.765 -1.298 3.483 1.00 16.36 O
TER

ATOM 1 O3' U B 18 45.041 -3.501 4.207 1.00 18.25 O
ATOM 2 P A B 19 46.074 -2.827 3.190 1.00 17.08 P
ATOM 3 OP1 A B 19 45.714 -3.214 1.812 1.00 18.30 O
ATOM 4 OP2 A B 19 47.442 -3.082 3.672 1.00 18.14 O
ATOM 5 O5' A B 19 45.765 -1.298 3.483 1.00 16.36 O
ATOM 6 C5' A B 19 44.571 -0.668 2.970 1.00 15.86 C
ATOM 7 C4' A B 19 44.714 0.821 3.218 1.00 15.62 C
ATOM 8 O4' A B 19 44.628 1.068 4.648 1.00 15.24 O
ATOM 9 C3' A B 19 46.063 1.373 2.769 1.00 15.46 C
ATOM 10 O3' A B 19 45.858 2.620 2.154 1.00 16.36 O
ATOM 11 C2' A B 19 46.853 1.488 4.082 1.00 15.38 C
ATOM 12 O2' A B 19 47.793 2.553 4.072 1.00 17.64 O
ATOM 13 C1' A B 19 45.775 1.728 5.134 1.00 16.70 C
ATOM 14 N9 A B 19 46.095 1.084 6.408 1.00 15.00 N
ATOM 15 C8 A B 19 45.847 -0.218 6.743 1.00 16.61 C
ATOM 16 N7 A B 19 46.251 -0.550 7.953 1.00 16.63 N
ATOM 17 C5 A B 19 46.821 0.613 8.434 1.00 16.95 C
ATOM 18 C6 A B 19 47.441 0.935 9.663 1.00 16.86 C
ATOM 19 N6 A B 19 47.596 0.056 10.671 1.00 17.10 N
ATOM 20 N1 A B 19 47.892 2.200 9.813 1.00 18.04 N
ATOM 21 C2 A B 19 47.739 3.089 8.817 1.00 17.00 C
ATOM 22 N3 A B 19 47.167 2.896 7.619 1.00 16.95 N
ATOM 23 C4 A B 19 46.734 1.633 7.495 1.00 15.20 C
ATOM 24 P U B 20 45.890 2.733 0.557 1.00 17.39 P
ATOM 25 OP1 U B 20 47.111 2.082 0.063 1.00 17.81 O
ATOM 26 OP2 U B 20 45.607 4.173 0.265 1.00 20.75 O
ATOM 27 O5' U B 20 44.647 1.871 0.094 1.00 15.57 O
TER

Atoms:
C4: (42.219,-8.136,8.691)
N3: (42.381,-6.798,9.043)
OP1: (43.802,-8.533,0.950)
OP2: (43.388,-9.761,3.200)
C2: (42.663,-5.747,8.187)
C1': (43.125,-5.116,5.830)
C3': (44.708,-4.845,4.084)
O5': (43.387,-7.295,3.074)
O4': (42.414,-5.307,4.640)
C5': (43.133,-6.030,2.455)
P: (43.104,-8.632,2.264)
C4': (43.296,-4.967,3.529)
C2': (44.583,-5.435,5.485)
O2': (45.481,-4.895,6.430)
N1: (42.752,-6.129,6.859)
O4: (41.966,-8.963,9.565)
O2: (42.786,-4.599,8.591)
C6: (42.623,-7.441,6.448)
C5: (42.344,-8.439,7.292)
O3': (45.041,-3.501,4.207)
OP1: (45.714,-3.214,1.812)
OP2: (47.442,-3.082,3.672)
C3': (46.063,1.373,2.769)
C1': (45.775,1.728,5.134)
C5': (44.571,-0.668,2.970)
O4': (44.628,1.068,4.648)
C8: (45.847,-0.218,6.743)
O2': (47.793,2.553,4.072)
C6: (47.441,0.935,9.663)
C5: (46.821,0.613,8.434)
C4: (46.734,1.633,7.495)
P: (46.074,-2.827,3.190)
C4': (44.714,0.821,3.218)
C2': (46.853,1.488,4.082)
C2: (47.739,3.089,8.817)
N1: (47.892,2.200,9.813)
N3: (47.167,2.896,7.619)
N6: (47.596,0.056,10.671)
N7: (46.251,-0.550,7.953)
N9: (46.095,1.084,6.408)
O5': (45.765,-1.298,3.483)
O3': (45.858,2.620,2.154)
Image (generated by PyMOL):
PyMOL image
show in jmol