ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GES:A19:A20

Extra

PDB:
ATOM 1 O3' A A 18 24.413 -25.037 19.156 1.00 31.77 O
ATOM 2 P U A 19 22.830 -25.065 18.874 1.00 33.98 P
ATOM 3 OP1 U A 19 22.146 -25.037 20.186 1.00 33.95 O
ATOM 4 OP2 U A 19 22.569 -26.180 17.921 1.00 33.82 O
ATOM 5 O5' U A 19 22.543 -23.694 18.114 1.00 32.90 O
ATOM 6 C5' U A 19 23.225 -22.517 18.509 1.00 30.33 C
ATOM 7 C4' U A 19 22.882 -21.337 17.620 1.00 29.57 C
ATOM 8 O4' U A 19 23.548 -21.499 16.329 1.00 26.65 O
ATOM 9 C3' U A 19 21.397 -21.200 17.281 1.00 28.93 C
ATOM 10 O3' U A 19 21.015 -19.851 17.116 1.00 28.06 O
ATOM 11 C2' U A 19 21.251 -21.983 15.983 1.00 29.19 C
ATOM 12 O2' U A 19 20.245 -21.479 15.124 1.00 30.38 O
ATOM 13 C1' U A 19 22.584 -21.686 15.317 1.00 26.80 C
ATOM 14 N1 U A 19 23.007 -22.722 14.371 1.00 25.47 N
ATOM 15 C2 U A 19 23.149 -22.331 13.058 1.00 25.87 C
ATOM 16 O2 U A 19 23.047 -21.166 12.705 1.00 22.22 O
ATOM 17 N3 U A 19 23.412 -23.349 12.172 1.00 25.39 N
ATOM 18 C4 U A 19 23.562 -24.680 12.471 1.00 25.91 C
ATOM 19 O4 U A 19 23.683 -25.486 11.556 1.00 28.79 O
ATOM 20 C5 U A 19 23.462 -24.998 13.869 1.00 26.32 C
ATOM 21 C6 U A 19 23.199 -24.025 14.751 1.00 25.10 C
ATOM 22 P A A 20 19.866 -19.239 18.048 1.00 31.44 P
ATOM 23 OP1 A A 20 20.198 -19.623 19.442 1.00 27.59 O
ATOM 24 OP2 A A 20 18.544 -19.587 17.488 1.00 27.90 O
ATOM 25 O5' A A 20 20.079 -17.673 17.885 1.00 31.23 O
TER

ATOM 1 O3' U B 19 21.015 -19.851 17.116 1.00 28.06 O
ATOM 2 P A B 20 19.866 -19.239 18.048 1.00 31.44 P
ATOM 3 OP1 A B 20 20.198 -19.623 19.442 1.00 27.59 O
ATOM 4 OP2 A B 20 18.544 -19.587 17.488 1.00 27.90 O
ATOM 5 O5' A B 20 20.079 -17.673 17.885 1.00 31.23 O
ATOM 6 C5' A B 20 21.384 -17.114 17.914 1.00 30.01 C
ATOM 7 C4' A B 20 21.295 -15.612 17.895 1.00 31.41 C
ATOM 8 O4' A B 20 21.395 -15.156 16.518 1.00 31.27 O
ATOM 9 C3' A B 20 19.973 -15.058 18.401 1.00 30.67 C
ATOM 10 O3' A B 20 20.152 -13.792 19.006 1.00 29.57 O
ATOM 11 C2' A B 20 19.105 -15.025 17.144 1.00 32.51 C
ATOM 12 O2' A B 20 18.086 -14.037 17.131 1.00 34.21 O
ATOM 13 C1' A B 20 20.132 -14.716 16.056 1.00 31.37 C
ATOM 14 N9 A B 20 19.815 -15.449 14.833 1.00 32.22 N
ATOM 15 C8 A B 20 20.110 -16.756 14.530 1.00 32.16 C
ATOM 16 N7 A B 20 19.666 -17.140 13.356 1.00 33.82 N
ATOM 17 C5 A B 20 19.042 -16.006 12.849 1.00 33.49 C
ATOM 18 C6 A B 20 18.361 -15.755 11.639 1.00 33.25 C
ATOM 19 N6 A B 20 18.177 -16.677 10.680 1.00 31.33 N
ATOM 20 N1 A B 20 17.864 -14.511 11.446 1.00 32.52 N
ATOM 21 C2 A B 20 18.034 -13.595 12.409 1.00 32.93 C
ATOM 22 N3 A B 20 18.646 -13.712 13.588 1.00 32.86 N
ATOM 23 C4 A B 20 19.133 -14.955 13.748 1.00 33.30 C
ATOM 24 P U B 21 20.176 -13.676 20.604 1.00 30.08 P
ATOM 25 OP1 U B 21 18.925 -14.283 21.129 1.00 26.08 O
ATOM 26 OP2 U B 21 20.500 -12.262 20.914 1.00 27.81 O
ATOM 27 O5' U B 21 21.415 -14.578 21.041 1.00 27.14 O
TER

Atoms:
C4: (23.562,-24.680,12.471)
N3: (23.412,-23.349,12.172)
OP1: (22.146,-25.037,20.186)
OP2: (22.569,-26.180,17.921)
C2: (23.149,-22.331,13.058)
C1': (22.584,-21.686,15.317)
C3': (21.397,-21.200,17.281)
O5': (22.543,-23.694,18.114)
O4': (23.548,-21.499,16.329)
C5': (23.225,-22.517,18.509)
P: (22.830,-25.065,18.874)
C4': (22.882,-21.337,17.620)
C2': (21.251,-21.983,15.983)
O2': (20.245,-21.479,15.124)
N1: (23.007,-22.722,14.371)
O4: (23.683,-25.486,11.556)
O2: (23.047,-21.166,12.705)
C6: (23.199,-24.025,14.751)
C5: (23.462,-24.998,13.869)
O3': (21.015,-19.851,17.116)
OP1: (20.198,-19.623,19.442)
OP2: (18.544,-19.587,17.488)
C3': (19.973,-15.058,18.401)
C1': (20.132,-14.716,16.056)
C5': (21.384,-17.114,17.914)
O4': (21.395,-15.156,16.518)
C8: (20.110,-16.756,14.530)
O2': (18.086,-14.037,17.131)
C6: (18.361,-15.755,11.639)
C5: (19.042,-16.006,12.849)
C4: (19.133,-14.955,13.748)
P: (19.866,-19.239,18.048)
C4': (21.295,-15.612,17.895)
C2': (19.105,-15.025,17.144)
C2: (18.034,-13.595,12.409)
N1: (17.864,-14.511,11.446)
N3: (18.646,-13.712,13.588)
N6: (18.177,-16.677,10.680)
N7: (19.666,-17.140,13.356)
N9: (19.815,-15.449,14.833)
O5': (20.079,-17.673,17.885)
O3': (20.152,-13.792,19.006)
Image (generated by PyMOL):
PyMOL image
show in jmol